RNA–Protein interactions for RNA: ENST00000508461.5

SMG7-214, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMG7, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-214ENST00000508461 UBTD2Q8WUN7 234 aa12.34□□□□□ -0.43
SMG7-214ENST00000508461 SLC38A4Q969I6 547 aa12.34□□□□□ -0.43
SMG7-214ENST00000508461 QRFPRQ96P65 431 aa12.34□□□□□ -0.43
SMG7-214ENST00000508461 RLIMQ9NVW2 624 aa12.34□□□□□ -0.43
SMG7-214ENST00000508461 MALT1Q9UDY8 824 aa12.34□□□□□ -0.43
SMG7-214ENST00000508461 SLC9A8Q9Y2E8 581 aa12.34□□□□□ -0.43
SMG7-214ENST00000508461 HCN4Q9Y3Q4 1203 aa12.34□□□□□ -0.43
SMG7-214ENST00000508461 K7ESM1 405 aa12.34□□□□□ -0.43
SMG7-214ENST00000508461 TLX2O43763 284 aaPredicted RBP12.34□□□□□ -0.43
SMG7-214ENST00000508461 PAK4O96013 591 aaPredicted RBP12.34□□□□□ -0.43
SMG7-214ENST00000508461 CSNK1DP48730 415 aa12.34□□□□□ -0.43
SMG7-214ENST00000508461 SELENOWP63302 87 aa12.34□□□□□ -0.43
SMG7-214ENST00000508461 MVKQ03426 396 aa12.34□□□□□ -0.43
SMG7-214ENST00000508461 KIAA0040Q15053 153 aa12.34□□□□□ -0.43
SMG7-214ENST00000508461 DHCR24Q15392 516 aa12.34□□□□□ -0.43
SMG7-214ENST00000508461 PDZK1Q5T2W1 519 aa12.34□□□□□ -0.43
SMG7-214ENST00000508461 XAF1Q6GPH4 301 aa12.34□□□□□ -0.43
SMG7-214ENST00000508461 C16orf62Q7Z3J2 963 aa12.34□□□□□ -0.43
SMG7-214ENST00000508461 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.34□□□□□ -0.43
SMG7-214ENST00000508461 CPXM2Q8N436 756 aa12.34□□□□□ -0.43
SMG7-214ENST00000508461 ADAMTS19Q8TE59 1207 aa12.34□□□□□ -0.43
SMG7-214ENST00000508461 ZSWIM8A7E2V4 1837 aa12.33□□□□□ -0.43
SMG7-214ENST00000508461 TRBV5-4A0A0C4DH59 114 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 TMCC2O75069 709 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 PRSS23O95084 383 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 CTSAP10619 480 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 PSMB5P28074 263 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 NRIP1P48552 1158 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 SEC13P55735 322 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 OLR1P78380 273 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 SLC7A9P82251 487 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 LASP1Q14847 261 aaKnown RBP12.33□□□□□ -0.44
SMG7-214ENST00000508461 SMU1Q2TAY7 513 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 MPP7Q5T2T1 576 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 C10orf62Q5T681 223 aaPredicted RBP12.33□□□□□ -0.44
SMG7-214ENST00000508461 MTERF3Q96E29 417 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 PSMA1P25786 263 aaKnown RBP12.33□□□□□ -0.44
SMG7-214ENST00000508461 RYKP34925 604 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 NCBP2P52298 156 aaKnown RBP eCLIP12.33□□□□□ -0.449e-7■□□□□ 10
SMG7-214ENST00000508461 TAS2R41P59536 307 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 ERVFC1P60507 584 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 WDR5P61964 334 aaKnown RBP12.33□□□□□ -0.44
SMG7-214ENST00000508461 MLLT1Q03111 559 aaPredicted RBP12.33□□□□□ -0.44
SMG7-214ENST00000508461 PROX2Q3B8N5 592 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 NIPAL1Q6NVV3 410 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 PGBD3Q8N328 593 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 CELF5Q8N6W0 485 aaKnown RBP12.33□□□□□ -0.44
SMG7-214ENST00000508461 SLC9A6Q92581 669 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 CSF3RQ99062 836 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 SPATA7Q9P0W8 599 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 KRBA1A5PL33 1030 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 TLR4O00206 839 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 CPNE6O95741 557 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 FGBP02675 491 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 SYN1P17600 705 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 CD22P20273 847 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 KELP23276 732 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 PTX3P26022 381 aaPredicted RBP12.33□□□□□ -0.44
SMG7-214ENST00000508461 CNR2P34972 360 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 XKP51811 444 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 NKX2-5P52952 324 aaPredicted RBP12.33□□□□□ -0.44
SMG7-214ENST00000508461 METAP1P53582 386 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 ITGA1P56199 1179 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 KCNC3Q14003 757 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 GPNMBQ14956 572 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 LRIF1Q5T3J3 769 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 USP30Q70CQ3 517 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 USP43Q70EL4 1123 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 IQCF1Q8N6M8 205 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 NIPSNAP1Q9BPW8 284 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 SLC6A16Q9GZN6 736 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 DSN1Q9H410 356 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 RNF167Q9H6Y7 350 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 TRIM45Q9H8W5 580 aaPredicted RBP12.33□□□□□ -0.44
SMG7-214ENST00000508461 GPN2Q9H9Y4 310 aaPredicted RBP12.33□□□□□ -0.44
SMG7-214ENST00000508461 GIN1Q9NXP7 522 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 CCL27Q9Y4X3 112 aa12.33□□□□□ -0.44
SMG7-214ENST00000508461 OR12D1P0DN82 309 aa12.32□□□□□ -0.44
SMG7-214ENST00000508461 IDSP22304 550 aa12.32□□□□□ -0.44
SMG7-214ENST00000508461 AVPR1BP47901 424 aa12.32□□□□□ -0.44
SMG7-214ENST00000508461 ATAD3BQ5T9A4 648 aa12.32□□□□□ -0.44
SMG7-214ENST00000508461 REEP3Q6NUK4 255 aa12.32□□□□□ -0.44
SMG7-214ENST00000508461 PRSS48Q7RTY5 328 aa12.32□□□□□ -0.44
SMG7-214ENST00000508461 ALDH16A1Q8IZ83 802 aa12.32□□□□□ -0.44
SMG7-214ENST00000508461 TMEM145Q8NBT3 493 aa12.32□□□□□ -0.44
SMG7-214ENST00000508461 OR10G6Q8NH81 332 aa12.32□□□□□ -0.44
SMG7-214ENST00000508461 SLC35G5Q96KT7 338 aa12.32□□□□□ -0.44
SMG7-214ENST00000508461 TMEFF2Q9UIK5 374 aaPredicted RBP12.32□□□□□ -0.44
SMG7-214ENST00000508461 OR1A2Q9Y585 309 aa12.32□□□□□ -0.44
SMG7-214ENST00000508461 DOCK6Q96HP0 2047 aa12.32□□□□□ -0.44
SMG7-214ENST00000508461 ERI3O43414 337 aaKnown RBP12.32□□□□□ -0.44
SMG7-214ENST00000508461 PRAMEF4O60810 478 aa12.32□□□□□ -0.44
SMG7-214ENST00000508461 CCT3P49368 545 aaKnown RBP12.32□□□□□ -0.44
SMG7-214ENST00000508461 PRAMEF9Q5VWM5 478 aa12.32□□□□□ -0.44
SMG7-214ENST00000508461 Q6ZNB5 142 aa12.32□□□□□ -0.44
SMG7-214ENST00000508461 Q6ZNX1 250 aa12.32□□□□□ -0.44
SMG7-214ENST00000508461 NUDT18Q6ZVK8 323 aa12.32□□□□□ -0.44
SMG7-214ENST00000508461 ANKRD13BQ86YJ7 626 aa12.32□□□□□ -0.44
SMG7-214ENST00000508461 OR14C36Q8NHC7 312 aa12.32□□□□□ -0.44
SMG7-214ENST00000508461 ZNF300Q96RE9 604 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms