RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 DUX4L4P0CJ87 422 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 DUX4L5P0CJ88 424 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 DUX4L6P0CJ89 424 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 DUX4L7P0CJ90 424 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 ITPKAP23677 461 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 CD40LGP29965 261 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 CD6P30203 668 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 CHRNA4P43681 627 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 MAPK9P45984 424 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 BRCC3P46736 316 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 ZNF143P52747 638 aaPredicted RBP3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 PPP5CP53041 499 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 RAB10P61026 200 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 MAP2K5Q13163 448 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 KRR1Q13601 381 aaKnown RBP3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 CAPSQ13938 189 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 GRM3Q14832 879 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 LAPTM4AQ15012 233 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 FAM110CQ1W6H9 321 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 ZNF484Q5JVG2 852 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 LIPNQ5VXI9 398 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 RHBDF2Q6PJF5 856 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 DEF8Q6ZN54 512 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 PIWIL4Q7Z3Z4 852 aaKnown RBP3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 CUZD1Q86UP6 607 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 FAM35AQ86V20 835 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 CYP4Z2PQ8N1L4 340 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 TMEM132CQ8N3T6 1108 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 C4orf32Q8N8J7 132 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 SYT14Q8NB59 555 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 SETD9Q8NE22 299 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 CHDHQ8NE62 594 aaPredicted RBP3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 OR14C36Q8NHC7 312 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 RP9Q8TA86 221 aaKnown RBP3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 FAM45AQ8TCE6 357 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 DTD1Q8TEA8 209 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 PHF10Q8WUB8 498 aaKnown RBP3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 MRPS31Q92665 395 aaKnown RBP3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 KIAA1191Q96A73 305 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 ARMC5Q96C12 935 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 MYO19Q96H55 970 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 PEX11GQ96HA9 241 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 PRRX2Q99811 253 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 TRMOQ9BU70 441 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 KATNB1Q9BVA0 655 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 SLC6A16Q9GZN6 736 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 ATG10Q9H0Y0 220 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 CDT1Q9H211 546 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 C1orf21Q9H246 121 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 POPDC2Q9HBU9 364 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 ASCL3Q9NQ33 180 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 RXFP3Q9NSD7 469 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 NUDT15Q9NV35 164 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 MARCH2Q9P0N8 246 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 DUX4Q9UBX2 424 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 MIOXQ9UGB7 285 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 POLR3HQ9Y535 204 aaPredicted RBP3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 ASB4Q9Y574 426 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 CLDN16Q9Y5I7 305 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 ALPK3Q96L96 1907 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 ZDBF2Q9HCK1 2354 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 PLXNA1Q9UIW2 1896 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 NCANO14594 1321 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 TTC24A2A3L6 582 aaPredicted RBP3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 GSAPA4D1B5 854 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 TCAF2A6NFQ2 919 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 TTLL8A6PVC2 850 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 A8MV72 311 aaPredicted RBP3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 TMEM233B4DJY2 109 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 FPGTO14772 594 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 GRID2O43424 1007 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 NPHS1O60500 1241 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 TLR5O60602 858 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 UGDHO60701 494 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 MED6O75586 246 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 TMEM63AO94886 807 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 CCNB2O95067 398 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 HLA-DQA2P01906 255 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 LRG1P02750 347 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 ANXA6P08133 673 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 UBA1P22314 1058 aaKnown RBP3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 PPP2R1BP30154 601 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 GRK4P32298 578 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 CTSKP43235 329 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 GBX2P52951 348 aaPredicted RBP3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 MAPK12P53778 367 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 FLI1Q01543 452 aaPredicted RBP3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 TAP2Q03519 686 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 FPGSQ05932 587 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 SLAMF1Q13291 335 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 PCID2Q5JVF3 399 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 TCTN3Q6NUS6 607 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 ESRP1Q6NXG1 681 aaKnown RBP3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 SLC27A4Q6P1M0 643 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 ZNF613Q6PF04 617 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 PLET1Q6UQ28 207 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 UNQ9370/PRO34162Q6UXP9 181 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 LINC00299Q6ZSB3 139 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 CYP4Z1Q86W10 505 aa3.54□□□□□ -1.84
PCDH11X-208ENST00000504220 PARGQ86W56 976 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms