RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 ALAS2P22557 587 aa18.55■□□□□ 0.56
SNAPC3-206ENST00000490969 CBLP22681 906 aa18.55■□□□□ 0.56
SNAPC3-206ENST00000490969 ITGB7P26010 798 aa18.55■□□□□ 0.56
SNAPC3-206ENST00000490969 SLC6A4P31645 630 aa18.55■□□□□ 0.56
SNAPC3-206ENST00000490969 SNRPD2P62316 118 aaKnown RBP18.55■□□□□ 0.56
SNAPC3-206ENST00000490969 NLGN4YQ8NFZ3 816 aaPredicted RBP18.55■□□□□ 0.56
SNAPC3-206ENST00000490969 CDC26Q8NHZ8 85 aa18.55■□□□□ 0.56
SNAPC3-206ENST00000490969 SH3KBP1Q96B97 665 aa18.55■□□□□ 0.56
SNAPC3-206ENST00000490969 FAM129BQ96TA1 746 aa18.55■□□□□ 0.56
SNAPC3-206ENST00000490969 CLEC2DQ9UHP7 191 aa18.55■□□□□ 0.56
SNAPC3-206ENST00000490969 TBX21Q9UL17 535 aa18.55■□□□□ 0.56
SNAPC3-206ENST00000490969 HYKKA2RU49 373 aa18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 NPIPB8E9PQR5 432 aa18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 MEN1O00255 615 aa18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 PRMT3O60678 531 aa18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 CSO75390 466 aaKnown RBP18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 OR2B3O76000 313 aa18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 VNN2O95498 520 aa18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 LAMP1P11279 417 aa18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 CSTF2P33240 577 aaKnown RBP eCLIP18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 GPC1P35052 558 aa18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 RING1Q06587 406 aa18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 RGNQ15493 299 aa18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 SPHARQ15513 63 aa18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 IFI44LQ53G44 452 aa18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 ESCO2Q56NI9 601 aa18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 PLET1Q6UQ28 207 aa18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 CREB3L2Q70SY1 520 aa18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 NPAS4Q8IUM7 802 aa18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 RNF175Q8N4F7 328 aa18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 C11orf65Q8NCR3 313 aa18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 SLC25A46Q96AG3 418 aa18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 COPS8Q99627 209 aa18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 MAPKAP1Q9BPZ7 522 aa18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 TMEM39AQ9NV64 488 aa18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 ARL15Q9NXU5 204 aa18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 TEKT2Q9UIF3 430 aa18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 ZFP37Q9Y6Q3 630 aaPredicted RBP18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 RANBP2P49792 3224 aaKnown RBP18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 A0A1W2PQL4 384 aaPredicted RBP18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 CBX4O00257 560 aa18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 WWP2O00308 870 aa18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 TSPAN19P0C672 248 aa18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 CYP2A6P11509 494 aaPredicted RBP18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 IFI30P13284 250 aa18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 CNR2P34972 360 aa18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 TWF1Q12792 350 aa18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 TEAD4Q15561 434 aa18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.54■□□□□ 0.562e-6■■□□□ 13.3
SNAPC3-206ENST00000490969 CDONQ4KMG0 1287 aa18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 PRSS55Q6UWB4 352 aaPredicted RBP18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 IDO2Q6ZQW0 420 aa18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 NAGSQ8N159 534 aa18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 CREB3L4Q8TEY5 395 aa18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 PAWRQ96IZ0 340 aaKnown RBP18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 FTSJ1Q9UET6 329 aa18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 PIKFYVEQ9Y2I7 2098 aa18.54■□□□□ 0.56
SNAPC3-206ENST00000490969 ZAR1LA6NP61 321 aa18.53■□□□□ 0.56
SNAPC3-206ENST00000490969 PCDH17O14917 1159 aa18.53■□□□□ 0.56
SNAPC3-206ENST00000490969 SHOXO15266 292 aa18.53■□□□□ 0.56
SNAPC3-206ENST00000490969 ADAM12O43184 909 aa18.53■□□□□ 0.56
SNAPC3-206ENST00000490969 TRIM3O75382 744 aaPredicted RBP18.53■□□□□ 0.56
SNAPC3-206ENST00000490969 CDRT1O95170 752 aa18.53■□□□□ 0.56
SNAPC3-206ENST00000490969 UQCRC1P31930 480 aa18.53■□□□□ 0.56
SNAPC3-206ENST00000490969 HMGCLP35914 325 aa18.53■□□□□ 0.56
SNAPC3-206ENST00000490969 AP2S1P53680 142 aaPredicted RBP18.53■□□□□ 0.56
SNAPC3-206ENST00000490969 CTXN3Q4LDR2 81 aa18.53■□□□□ 0.56
SNAPC3-206ENST00000490969 PYDC2Q56P42 97 aa18.53■□□□□ 0.56
SNAPC3-206ENST00000490969 SLC34A3Q8N130 599 aa18.53■□□□□ 0.56
SNAPC3-206ENST00000490969 ZNF557Q8N988 423 aaPredicted RBP18.53■□□□□ 0.56
SNAPC3-206ENST00000490969 MSLNLQ96KJ4 702 aa18.53■□□□□ 0.56
SNAPC3-206ENST00000490969 FCRL1Q96LA6 429 aa18.53■□□□□ 0.56
SNAPC3-206ENST00000490969 ASB8Q9H765 288 aa18.53■□□□□ 0.56
SNAPC3-206ENST00000490969 NDUFB11Q9NX14 153 aa18.53■□□□□ 0.56
SNAPC3-206ENST00000490969 SSR3Q9UNL2 185 aa18.53■□□□□ 0.56
SNAPC3-206ENST00000490969 ALG5Q9Y673 324 aa18.53■□□□□ 0.56
SNAPC3-206ENST00000490969 C1orf226A1L170 272 aa18.53■□□□□ 0.56
SNAPC3-206ENST00000490969 PRAMEF25A6NGN4 478 aa18.53■□□□□ 0.56
SNAPC3-206ENST00000490969 GAPDHSO14556 408 aaPredicted RBP18.53■□□□□ 0.56
SNAPC3-206ENST00000490969 PCDH7O60245 1069 aa18.53■□□□□ 0.56
SNAPC3-206ENST00000490969 ENTPD6O75354 484 aa18.53■□□□□ 0.56
SNAPC3-206ENST00000490969 PDE9AO76083 593 aa18.53■□□□□ 0.56
SNAPC3-206ENST00000490969 RPIAP49247 311 aa18.53■□□□□ 0.56
SNAPC3-206ENST00000490969 FUT10Q6P4F1 479 aa18.53■□□□□ 0.56
SNAPC3-206ENST00000490969 VPS35Q96QK1 796 aa18.53■□□□□ 0.56
SNAPC3-206ENST00000490969 VN1R3Q9BXE9 311 aa18.53■□□□□ 0.56
SNAPC3-206ENST00000490969 MCOLN1Q9GZU1 580 aa18.53■□□□□ 0.56
SNAPC3-206ENST00000490969 CORO2BQ9UQ03 480 aa18.53■□□□□ 0.56
SNAPC3-206ENST00000490969 HCN4Q9Y3Q4 1203 aa18.53■□□□□ 0.56
SNAPC3-206ENST00000490969 PCDHB9Q9Y5E1 797 aa18.53■□□□□ 0.56
SNAPC3-206ENST00000490969 J3KTA2 159 aa18.52■□□□□ 0.56
SNAPC3-206ENST00000490969 RPL17P18621 184 aaKnown RBP18.52■□□□□ 0.56
SNAPC3-206ENST00000490969 SSTR4P31391 388 aa18.52■□□□□ 0.56
SNAPC3-206ENST00000490969 RPS24P62847 133 aaKnown RBP18.52■□□□□ 0.56
SNAPC3-206ENST00000490969 TAF10Q12962 218 aa18.52■□□□□ 0.56
SNAPC3-206ENST00000490969 HNRNPA0Q13151 305 aaKnown RBP18.52■□□□□ 0.56
SNAPC3-206ENST00000490969 GAB1Q13480 694 aa18.52■□□□□ 0.56
SNAPC3-206ENST00000490969 MRPL58Q14197 206 aaKnown RBP18.52■□□□□ 0.56
SNAPC3-206ENST00000490969 ZXDCQ2QGD7 858 aaPredicted RBP18.52■□□□□ 0.56
SNAPC3-206ENST00000490969 FRG2Q64ET8 278 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms