RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 BHLHE41Q9C0J9 482 aaPredicted RBP13.45□□□□□ -0.26
VPS26A-205ENST00000489656 GID8Q9NWU2 228 aa13.45□□□□□ -0.26
VPS26A-205ENST00000489656 FAM120CQ9NX05 1096 aaKnown RBP13.45□□□□□ -0.26
VPS26A-205ENST00000489656 SOHLH2Q9NX45 425 aa13.45□□□□□ -0.26
VPS26A-205ENST00000489656 MAN2B2Q9Y2E5 1009 aa13.45□□□□□ -0.26
VPS26A-205ENST00000489656 HCN4Q9Y3Q4 1203 aa13.45□□□□□ -0.26
VPS26A-205ENST00000489656 FITM1A5D6W6 292 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 ANKRD65E5RJM6 399 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 FXYD1O00168 92 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 AKAP10O43572 662 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 TMPRSS11DO60235 418 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 GUCY1B2O75343 617 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 RASSF9O75901 435 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 RPLP0P05388 317 aaKnown RBP13.44□□□□□ -0.26
VPS26A-205ENST00000489656 IL3P08700 152 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 FAM58BPP0C7Q3 252 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 COX7A2P14406 83 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 DRD2P14416 443 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 NQO1P15559 274 aaKnown RBP13.44□□□□□ -0.26
VPS26A-205ENST00000489656 CKMT2P17540 419 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 DDX5P17844 614 aaKnown RBP13.44□□□□□ -0.26
VPS26A-205ENST00000489656 ALOX12P18054 663 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 DDCP20711 480 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 ACP1P24666 158 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 NBL1P41271 181 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 PHC1P78364 1004 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 C2orf80Q0P641 193 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 LRRC74AQ0VAA2 488 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 SLC9A5Q14940 896 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 HEPACAMQ14CZ8 416 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 SF3A2Q15428 464 aaKnown RBP13.44□□□□□ -0.26
VPS26A-205ENST00000489656 CSRP2Q16527 193 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 MAPKAPK3Q16644 382 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 PAGE3Q5JUK9 113 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 WASHC2DQ5SRD0 308 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 CPTPQ5TA50 214 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 NIPAL1Q6NVV3 410 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 PRMT9Q6P2P2 845 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 USP53Q70EK8 1073 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 GPR180Q86V85 440 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 DEFB107AQ8IZN7 70 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 ARHGAP24Q8N264 748 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 NATD1Q8N6N6 113 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 OR8K5Q8NH50 307 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 CDC26Q8NHZ8 85 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 NUDT8Q8WV74 236 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 GTF2H4Q92759 462 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 CNDP2Q96KP4 475 aaKnown RBP13.44□□□□□ -0.26
VPS26A-205ENST00000489656 RAB3IPQ96QF0 476 aaPredicted RBP13.44□□□□□ -0.26
VPS26A-205ENST00000489656 OR52E6Q96RD3 313 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 HOPXQ9BPY8 73 aaPredicted RBP13.44□□□□□ -0.26
VPS26A-205ENST00000489656 GPATCH1Q9BRR8 931 aaKnown RBP13.44□□□□□ -0.26
VPS26A-205ENST00000489656 ZMYND15Q9H091 742 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 RMND5AQ9H871 391 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 COPS7BQ9H9Q2 264 aaPredicted RBP13.44□□□□□ -0.26
VPS26A-205ENST00000489656 WDR41Q9HAD4 459 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 TMEM9Q9P0T7 183 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 CROTQ9UKG9 612 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 PRPF19Q9UMS4 504 aaKnown RBP13.44□□□□□ -0.26
VPS26A-205ENST00000489656 RRP15Q9Y3B9 282 aaKnown RBP13.44□□□□□ -0.26
VPS26A-205ENST00000489656 ASB4Q9Y574 426 aa13.44□□□□□ -0.26
VPS26A-205ENST00000489656 A0A0G2JN53 185 aa13.43□□□□□ -0.26
VPS26A-205ENST00000489656 GABRR3A8MPY1 467 aa13.43□□□□□ -0.26
VPS26A-205ENST00000489656 NTN3O00634 580 aaPredicted RBP13.43□□□□□ -0.26
VPS26A-205ENST00000489656 SEC16AO15027 2179 aa13.43□□□□□ -0.26
VPS26A-205ENST00000489656 SCN2BO60939 215 aa13.43□□□□□ -0.26
VPS26A-205ENST00000489656 LDOC1O95751 146 aaPredicted RBP13.43□□□□□ -0.26
VPS26A-205ENST00000489656 PIM1P11309 404 aaPredicted RBP13.43□□□□□ -0.26
VPS26A-205ENST00000489656 CD59P13987 128 aa13.43□□□□□ -0.26
VPS26A-205ENST00000489656 NELFEP18615 380 aaKnown RBP13.43□□□□□ -0.26
VPS26A-205ENST00000489656 CERS1P27544 350 aa13.43□□□□□ -0.26
VPS26A-205ENST00000489656 WNT3P56703 355 aa13.43□□□□□ -0.26
VPS26A-205ENST00000489656 RAB8AP61006 207 aa13.43□□□□□ -0.26
VPS26A-205ENST00000489656 KCNJ2P63252 427 aa13.43□□□□□ -0.26
VPS26A-205ENST00000489656 SLAMF1Q13291 335 aa13.43□□□□□ -0.26
VPS26A-205ENST00000489656 DEFB110Q30KQ9 67 aa13.43□□□□□ -0.26
VPS26A-205ENST00000489656 TMTC4Q5T4D3 741 aa13.43□□□□□ -0.26
VPS26A-205ENST00000489656 ANXA8L1Q5VT79 327 aa13.43□□□□□ -0.26
VPS26A-205ENST00000489656 GARNL3Q5VVW2 1013 aa13.43□□□□□ -0.26
VPS26A-205ENST00000489656 ZNF574Q6ZN55 896 aaPredicted RBP13.43□□□□□ -0.26
VPS26A-205ENST00000489656 ARHGAP22Q7Z5H3 698 aa13.43□□□□□ -0.26
VPS26A-205ENST00000489656 AMER3Q8N944 861 aa13.43□□□□□ -0.26
VPS26A-205ENST00000489656 OR7A2PQ8NGA2 310 aa13.43□□□□□ -0.26
VPS26A-205ENST00000489656 GFM2Q969S9 779 aaKnown RBP13.43□□□□□ -0.26
VPS26A-205ENST00000489656 UTP4Q969X6 686 aaKnown RBP13.43□□□□□ -0.26
VPS26A-205ENST00000489656 LRRC58Q96CX6 371 aa13.43□□□□□ -0.26
VPS26A-205ENST00000489656 DUSP26Q9BV47 211 aa13.43□□□□□ -0.26
VPS26A-205ENST00000489656 EDEM2Q9BV94 578 aa13.43□□□□□ -0.26
VPS26A-205ENST00000489656 NPLQ9BXD5 320 aaPredicted RBP13.43□□□□□ -0.26
VPS26A-205ENST00000489656 TMEM9BQ9NQ34 198 aa13.43□□□□□ -0.26
VPS26A-205ENST00000489656 SERHLQ9NQF3 203 aa13.43□□□□□ -0.26
VPS26A-205ENST00000489656 PRDM9Q9NQV7 894 aa13.43□□□□□ -0.26
VPS26A-205ENST00000489656 SEMA4GQ9NTN9 838 aa13.43□□□□□ -0.26
VPS26A-205ENST00000489656 ATAD3AQ9NVI7 634 aa13.43□□□□□ -0.26
VPS26A-205ENST00000489656 TAS2R7Q9NYW3 318 aa13.43□□□□□ -0.26
VPS26A-205ENST00000489656 EHD3Q9NZN3 535 aa13.43□□□□□ -0.26
VPS26A-205ENST00000489656 KLHL3Q9UH77 587 aa13.43□□□□□ -0.26
VPS26A-205ENST00000489656 PCDHGA7Q9Y5G6 932 aa13.43□□□□□ -0.26
VPS26A-205ENST00000489656 PCNX2A6NKB5 2137 aa13.42□□□□□ -0.26
VPS26A-205ENST00000489656 A0A096LPI6 279 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms