RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 MIEF2Q96C03 454 aa10.44□□□□□ -0.74
UBE4B-210ENST00000488228 CNDP1Q96KN2 507 aa10.44□□□□□ -0.74
UBE4B-210ENST00000488228 KCNC2Q96PR1 638 aa10.44□□□□□ -0.74
UBE4B-210ENST00000488228 CSF3RQ99062 836 aa10.44□□□□□ -0.74
UBE4B-210ENST00000488228 CENPKQ9BS16 269 aa10.44□□□□□ -0.74
UBE4B-210ENST00000488228 CRB3Q9BUF7 120 aa10.44□□□□□ -0.74
UBE4B-210ENST00000488228 EFHD1Q9BUP0 239 aa10.44□□□□□ -0.74
UBE4B-210ENST00000488228 MRPL1Q9BYD6 325 aaKnown RBP10.44□□□□□ -0.74
UBE4B-210ENST00000488228 ACPTQ9BZG2 426 aa10.44□□□□□ -0.74
UBE4B-210ENST00000488228 MKKSQ9NPJ1 570 aaPredicted RBP10.44□□□□□ -0.74
UBE4B-210ENST00000488228 PRDM7Q9NQW5 492 aa10.44□□□□□ -0.74
UBE4B-210ENST00000488228 C14orf105Q9NVL8 296 aa10.44□□□□□ -0.74
UBE4B-210ENST00000488228 NXT1Q9UKK6 140 aaKnown RBP10.44□□□□□ -0.74
UBE4B-210ENST00000488228 SLC12A4Q9UP95 1085 aa10.44□□□□□ -0.74
UBE4B-210ENST00000488228 CROCCQ5TZA2 2017 aa10.44□□□□□ -0.74
UBE4B-210ENST00000488228 PIEZO2Q9H5I5 2752 aa10.44□□□□□ -0.74
UBE4B-210ENST00000488228 ATRXP46100 2492 aa10.44□□□□□ -0.74
UBE4B-210ENST00000488228 TNRC6AQ8NDV7 1962 aaKnown RBP10.43□□□□□ -0.74
UBE4B-210ENST00000488228 A0A088AWK7 358 aa10.43□□□□□ -0.74
UBE4B-210ENST00000488228 OR2W5A6NFC9 320 aa10.43□□□□□ -0.74
UBE4B-210ENST00000488228 K7ENP7 123 aa10.43□□□□□ -0.74
UBE4B-210ENST00000488228 AZIN1O14977 448 aa10.43□□□□□ -0.74
UBE4B-210ENST00000488228 SEMA3DO95025 777 aa10.43□□□□□ -0.74
UBE4B-210ENST00000488228 SCELO95171 688 aa10.43□□□□□ -0.74
UBE4B-210ENST00000488228 HSPA4LO95757 839 aa10.43□□□□□ -0.74
UBE4B-210ENST00000488228 ALBP02768 609 aa10.43□□□□□ -0.74
UBE4B-210ENST00000488228 NEFHP12036 1026 aa10.43□□□□□ -0.74
UBE4B-210ENST00000488228 ZNF10P21506 573 aaPredicted RBP10.43□□□□□ -0.74
UBE4B-210ENST00000488228 HIST1H1TP22492 207 aaPredicted RBP10.43□□□□□ -0.74
UBE4B-210ENST00000488228 ATP5A1P25705 553 aaKnown RBP10.43□□□□□ -0.74
UBE4B-210ENST00000488228 PTX3P26022 381 aaPredicted RBP10.43□□□□□ -0.74
UBE4B-210ENST00000488228 SLC18A1P54219 525 aa10.43□□□□□ -0.74
UBE4B-210ENST00000488228 HMGCS1Q01581 520 aa10.43□□□□□ -0.74
UBE4B-210ENST00000488228 BST1Q10588 318 aa10.43□□□□□ -0.74
UBE4B-210ENST00000488228 CSTF3Q12996 717 aaKnown RBP10.43□□□□□ -0.74
UBE4B-210ENST00000488228 CUL3Q13618 768 aa10.43□□□□□ -0.74
UBE4B-210ENST00000488228 ATP1A4Q13733 1029 aa10.43□□□□□ -0.74
UBE4B-210ENST00000488228 RUNX2Q13950 521 aa10.43□□□□□ -0.74
UBE4B-210ENST00000488228 UGT8Q16880 541 aa10.43□□□□□ -0.74
UBE4B-210ENST00000488228 MINDY4Q4G0A6 757 aa10.43□□□□□ -0.74
UBE4B-210ENST00000488228 SH2D4BQ5SQS7 431 aa10.43□□□□□ -0.74
UBE4B-210ENST00000488228 C10orf62Q5T681 223 aaPredicted RBP10.43□□□□□ -0.74
UBE4B-210ENST00000488228 DEPDC1Q5TB30 811 aa10.43□□□□□ -0.74
UBE4B-210ENST00000488228 FAAH2Q6GMR7 532 aa10.43□□□□□ -0.74
UBE4B-210ENST00000488228 INO80CQ6PI98 192 aaPredicted RBP10.43□□□□□ -0.74
UBE4B-210ENST00000488228 PPP1R32Q7Z5V6 425 aa10.43□□□□□ -0.74
UBE4B-210ENST00000488228 MRGPREQ86SM8 312 aa10.43□□□□□ -0.74
UBE4B-210ENST00000488228 LAPTM4BQ86VI4 370 aa10.43□□□□□ -0.74
UBE4B-210ENST00000488228 NUDT13Q86X67 352 aa10.43□□□□□ -0.74
UBE4B-210ENST00000488228 ACOT4Q8N9L9 421 aa10.43□□□□□ -0.74
UBE4B-210ENST00000488228 ZSCAN1Q8NBB4 408 aa10.43□□□□□ -0.74
UBE4B-210ENST00000488228 ADAMTS17Q8TE56 1095 aa10.43□□□□□ -0.74
UBE4B-210ENST00000488228 RGMAQ96B86 450 aa10.43□□□□□ -0.74
UBE4B-210ENST00000488228 SERINC2Q96SA4 455 aa10.43□□□□□ -0.74
UBE4B-210ENST00000488228 SERPINI1Q99574 410 aa10.43□□□□□ -0.74
UBE4B-210ENST00000488228 TBCDQ9BTW9 1192 aa10.43□□□□□ -0.74
UBE4B-210ENST00000488228 LANCL2Q9NS86 450 aa10.43□□□□□ -0.74
UBE4B-210ENST00000488228 C3orf18Q9UK00 162 aa10.43□□□□□ -0.74
UBE4B-210ENST00000488228 PPT2Q9UMR5 302 aa10.43□□□□□ -0.74
UBE4B-210ENST00000488228 CPAMD8Q8IZJ3 1885 aa10.42□□□□□ -0.74
UBE4B-210ENST00000488228 ATMQ13315 3056 aa10.42□□□□□ -0.74
UBE4B-210ENST00000488228 A0A0A6YYD5 115 aa10.42□□□□□ -0.74
UBE4B-210ENST00000488228 IDSB3KWA1 339 aa10.42□□□□□ -0.74
UBE4B-210ENST00000488228 TMEM114B3SHH9 223 aa10.42□□□□□ -0.74
UBE4B-210ENST00000488228 FAM227AF5H4B4 570 aa10.42□□□□□ -0.74
UBE4B-210ENST00000488228 PSMD12O00232 456 aaPredicted RBP10.42□□□□□ -0.74
UBE4B-210ENST00000488228 TMPRSS11DO60235 418 aa10.42□□□□□ -0.74
UBE4B-210ENST00000488228 B4GALT2O60909 372 aa10.42□□□□□ -0.74
UBE4B-210ENST00000488228 ALOX12BO75342 701 aa10.42□□□□□ -0.74
UBE4B-210ENST00000488228 ULK1O75385 1050 aa10.42□□□□□ -0.74
UBE4B-210ENST00000488228 SKAP2O75563 359 aaPredicted RBP10.42□□□□□ -0.74
UBE4B-210ENST00000488228 PRKRAO75569 313 aaKnown RBP10.42□□□□□ -0.74
UBE4B-210ENST00000488228 BMP10O95393 424 aa10.42□□□□□ -0.74
UBE4B-210ENST00000488228 GBAP04062 536 aa10.42□□□□□ -0.74
UBE4B-210ENST00000488228 FHP07954 510 aa10.42□□□□□ -0.74
UBE4B-210ENST00000488228 UROSP10746 265 aa10.42□□□□□ -0.74
UBE4B-210ENST00000488228 RNH1P13489 461 aaKnown RBP10.42□□□□□ -0.74
UBE4B-210ENST00000488228 BSGP35613 385 aa10.42□□□□□ -0.74
UBE4B-210ENST00000488228 SERPINB5P36952 375 aa10.42□□□□□ -0.74
UBE4B-210ENST00000488228 HNRNPFP52597 415 aaKnown RBP10.42□□□□□ -0.74
UBE4B-210ENST00000488228 LIM2P55344 173 aa10.42□□□□□ -0.74
UBE4B-210ENST00000488228 HNRNPH2P55795 449 aaKnown RBP10.42□□□□□ -0.74
UBE4B-210ENST00000488228 ABCE1P61221 599 aaKnown RBP10.42□□□□□ -0.74
UBE4B-210ENST00000488228 PPP2R2AP63151 447 aa10.42□□□□□ -0.74
UBE4B-210ENST00000488228 MC1RQ01726 317 aa10.42□□□□□ -0.74
UBE4B-210ENST00000488228 EEF1A2Q05639 463 aaKnown RBP10.42□□□□□ -0.74
UBE4B-210ENST00000488228 GALNT1Q10472 559 aaPredicted RBP10.42□□□□□ -0.74
UBE4B-210ENST00000488228 AP5B1Q2VPB7 878 aa10.42□□□□□ -0.74
UBE4B-210ENST00000488228 CPZQ66K79 652 aa10.42□□□□□ -0.74
UBE4B-210ENST00000488228 OR4C11Q6IEV9 310 aa10.42□□□□□ -0.74
UBE4B-210ENST00000488228 NIPAL1Q6NVV3 410 aa10.42□□□□□ -0.74
UBE4B-210ENST00000488228 LANCL3Q6ZV70 420 aa10.42□□□□□ -0.74
UBE4B-210ENST00000488228 COMMD6Q7Z4G1 85 aa10.42□□□□□ -0.74
UBE4B-210ENST00000488228 RAB43Q86YS6 212 aa10.42□□□□□ -0.74
UBE4B-210ENST00000488228 C1orf52Q8N6N3 182 aaKnown RBP10.42□□□□□ -0.74
UBE4B-210ENST00000488228 EFCAB3Q8N7B9 438 aa10.42□□□□□ -0.74
UBE4B-210ENST00000488228 TMEM52Q8NDY8 209 aa10.42□□□□□ -0.74
UBE4B-210ENST00000488228 SRFBP1Q8NEF9 429 aaKnown RBP10.42□□□□□ -0.74
UBE4B-210ENST00000488228 TWIST2Q8WVJ9 160 aa10.42□□□□□ -0.74
UBE4B-210ENST00000488228 TSLPQ969D9 159 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms