RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 TBL3Q12788 808 aaKnown RBP16.86■□□□□ 0.29
CPNE1-224ENST00000483359 RUNX2Q13950 521 aa16.86■□□□□ 0.29
CPNE1-224ENST00000483359 ERV3-1Q14264 604 aa16.86■□□□□ 0.29
CPNE1-224ENST00000483359 OVCH1Q7RTY7 1134 aa16.86■□□□□ 0.29
CPNE1-224ENST00000483359 COMMD6Q7Z4G1 85 aa16.86■□□□□ 0.29
CPNE1-224ENST00000483359 NUDT13Q86X67 352 aa16.86■□□□□ 0.29
CPNE1-224ENST00000483359 SERINC2Q96SA4 455 aa16.86■□□□□ 0.29
CPNE1-224ENST00000483359 ACTL8Q9H568 366 aa16.86■□□□□ 0.29
CPNE1-224ENST00000483359 PSD3Q9NYI0 1048 aa16.86■□□□□ 0.29
CPNE1-224ENST00000483359 GIMAP2Q9UG22 337 aa16.86■□□□□ 0.29
CPNE1-224ENST00000483359 TAF4O00268 1085 aa16.86■□□□□ 0.29
CPNE1-224ENST00000483359 SEMA3DO95025 777 aa16.86■□□□□ 0.29
CPNE1-224ENST00000483359 SNUPNO95149 360 aaKnown RBP16.86■□□□□ 0.29
CPNE1-224ENST00000483359 RPS15P62841 145 aaKnown RBP16.86■□□□□ 0.29
CPNE1-224ENST00000483359 FOXK2Q01167 660 aa16.86■□□□□ 0.29
CPNE1-224ENST00000483359 OCA2Q04671 838 aa16.86■□□□□ 0.29
CPNE1-224ENST00000483359 ZNF33BQ06732 778 aa16.86■□□□□ 0.29
CPNE1-224ENST00000483359 NR6A1Q15406 480 aa16.86■□□□□ 0.29
CPNE1-224ENST00000483359 NKG7Q16617 165 aa16.86■□□□□ 0.29
CPNE1-224ENST00000483359 MFSD4BQ5TF39 518 aa16.86■□□□□ 0.29
CPNE1-224ENST00000483359 MRPL14Q6P1L8 145 aaKnown RBP16.86■□□□□ 0.29
CPNE1-224ENST00000483359 TRIM46Q7Z4K8 759 aa16.86■□□□□ 0.29
CPNE1-224ENST00000483359 CA13Q8N1Q1 262 aa16.86■□□□□ 0.29
CPNE1-224ENST00000483359 STT3BQ8TCJ2 826 aa16.86■□□□□ 0.29
CPNE1-224ENST00000483359 EBPLQ9BY08 206 aa16.86■□□□□ 0.29
CPNE1-224ENST00000483359 NMRK1Q9NWW6 199 aa16.86■□□□□ 0.29
CPNE1-224ENST00000483359 FBXW2Q9UKT8 454 aa16.86■□□□□ 0.29
CPNE1-224ENST00000483359 RRP8O43159 456 aaKnown RBP16.85■□□□□ 0.29
CPNE1-224ENST00000483359 KLK1P06870 262 aa16.85■□□□□ 0.29
CPNE1-224ENST00000483359 GALNTL6Q49A17 601 aa16.85■□□□□ 0.29
CPNE1-224ENST00000483359 NIPAL1Q6NVV3 410 aa16.85■□□□□ 0.29
CPNE1-224ENST00000483359 SPACA3Q8IXA5 215 aa16.85■□□□□ 0.29
CPNE1-224ENST00000483359 METTL4Q8N3J2 472 aa16.85■□□□□ 0.29
CPNE1-224ENST00000483359 FAM47BQ8NA70 645 aa16.85■□□□□ 0.29
CPNE1-224ENST00000483359 FKBP10Q96AY3 582 aa16.85■□□□□ 0.29
CPNE1-224ENST00000483359 MIEF2Q96C03 454 aa16.85■□□□□ 0.29
CPNE1-224ENST00000483359 C19orf60Q96EN9 201 aa16.85■□□□□ 0.29
CPNE1-224ENST00000483359 C3orf30Q96M34 536 aa16.85■□□□□ 0.29
CPNE1-224ENST00000483359 NUF2Q9BZD4 464 aa16.85■□□□□ 0.29
CPNE1-224ENST00000483359 ROGDIQ9GZN7 287 aa16.85■□□□□ 0.29
CPNE1-224ENST00000483359 AHSPQ9NZD4 102 aa16.85■□□□□ 0.29
CPNE1-224ENST00000483359 HAO1Q9UJM8 370 aa16.85■□□□□ 0.29
CPNE1-224ENST00000483359 FARSAQ9Y285 508 aaKnown RBP16.85■□□□□ 0.29
CPNE1-224ENST00000483359 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.85■□□□□ 0.29
CPNE1-224ENST00000483359 PTRH2Q9Y3E5 179 aaKnown RBP16.85■□□□□ 0.29
CPNE1-224ENST00000483359 CCDC88CQ9P219 2028 aa16.84■□□□□ 0.29
CPNE1-224ENST00000483359 OR2W5A6NFC9 320 aa16.84■□□□□ 0.29
CPNE1-224ENST00000483359 C21orf140B9A014 251 aa16.84■□□□□ 0.29
CPNE1-224ENST00000483359 TERTO14746 1132 aaKnown RBP16.84■□□□□ 0.29
CPNE1-224ENST00000483359 RGS14O43566 566 aa16.84■□□□□ 0.29
CPNE1-224ENST00000483359 TMPRSS11DO60235 418 aa16.84■□□□□ 0.29
CPNE1-224ENST00000483359 ZGLP1P0C6A0 271 aa16.84■□□□□ 0.29
CPNE1-224ENST00000483359 LIM2P55344 173 aa16.84■□□□□ 0.29
CPNE1-224ENST00000483359 ACSM2AQ08AH3 577 aa16.84■□□□□ 0.29
CPNE1-224ENST00000483359 SLAMF1Q13291 335 aa16.84■□□□□ 0.29
CPNE1-224ENST00000483359 MINDY4Q4G0A6 757 aa16.84■□□□□ 0.29
CPNE1-224ENST00000483359 ACSM2BQ68CK6 577 aa16.84■□□□□ 0.29
CPNE1-224ENST00000483359 CYP20A1Q6UW02 462 aa16.84■□□□□ 0.29
CPNE1-224ENST00000483359 RIPOR1Q6ZS17 1223 aa16.84■□□□□ 0.29
CPNE1-224ENST00000483359 Q6ZSR9 355 aa16.84■□□□□ 0.29
CPNE1-224ENST00000483359 CRLF3Q8IUI8 442 aa16.84■□□□□ 0.29
CPNE1-224ENST00000483359 ZC3H7AQ8IWR0 971 aaKnown RBP16.84■□□□□ 0.29
CPNE1-224ENST00000483359 EFCAB3Q8N7B9 438 aa16.84■□□□□ 0.29
CPNE1-224ENST00000483359 CSF3RQ99062 836 aa16.84■□□□□ 0.29
CPNE1-224ENST00000483359 SPSB2Q99619 263 aa16.84■□□□□ 0.29
CPNE1-224ENST00000483359 MAPKAP1Q9BPZ7 522 aa16.84■□□□□ 0.29
CPNE1-224ENST00000483359 MKKSQ9NPJ1 570 aaPredicted RBP16.84■□□□□ 0.29
CPNE1-224ENST00000483359 TCFL5Q9UL49 500 aa16.84■□□□□ 0.29
CPNE1-224ENST00000483359 DAPP1Q9UN19 280 aa16.84■□□□□ 0.29
CPNE1-224ENST00000483359 CCL27Q9Y4X3 112 aa16.84■□□□□ 0.29
CPNE1-224ENST00000483359 POLR3HQ9Y535 204 aaPredicted RBP16.84■□□□□ 0.29
CPNE1-224ENST00000483359 ARHGAP10A1A4S6 786 aa16.84■□□□□ 0.29
CPNE1-224ENST00000483359 SERTM1A2A2V5 107 aa16.84■□□□□ 0.29
CPNE1-224ENST00000483359 FAM227AF5H4B4 570 aa16.84■□□□□ 0.29
CPNE1-224ENST00000483359 PSMD12O00232 456 aaPredicted RBP16.84■□□□□ 0.29
CPNE1-224ENST00000483359 SLC28A1O00337 649 aa16.84■□□□□ 0.29
CPNE1-224ENST00000483359 KLF7O75840 302 aaPredicted RBP16.84■□□□□ 0.29
CPNE1-224ENST00000483359 RSL1D1O76021 490 aaKnown RBP16.84■□□□□ 0.29
CPNE1-224ENST00000483359 WT1P19544 449 aaPredicted RBP16.84■□□□□ 0.29
CPNE1-224ENST00000483359 PTPN4P29074 926 aa16.84■□□□□ 0.29
CPNE1-224ENST00000483359 TPP2P29144 1249 aaPredicted RBP16.84■□□□□ 0.29
CPNE1-224ENST00000483359 KLC1Q07866 573 aa16.84■□□□□ 0.29
CPNE1-224ENST00000483359 LAPTM4BQ86VI4 370 aa16.84■□□□□ 0.29
CPNE1-224ENST00000483359 STARD8Q92502 1023 aa16.84■□□□□ 0.29
CPNE1-224ENST00000483359 DPH1Q9BZG8 443 aa16.84■□□□□ 0.29
CPNE1-224ENST00000483359 KCND3Q9UK17 655 aa16.84■□□□□ 0.29
CPNE1-224ENST00000483359 PADI2Q9Y2J8 665 aa16.84■□□□□ 0.29
CPNE1-224ENST00000483359 SCN2AQ99250 2005 aa16.84■□□□□ 0.29
CPNE1-224ENST00000483359 A0A0A6YYD5 115 aa16.83■□□□□ 0.28
CPNE1-224ENST00000483359 TCP11X1B4DZS4 312 aa16.83■□□□□ 0.28
CPNE1-224ENST00000483359 B4GALT2O60909 372 aa16.83■□□□□ 0.28
CPNE1-224ENST00000483359 SEC22BO75396 215 aa16.83■□□□□ 0.28
CPNE1-224ENST00000483359 PRKRAO75569 313 aaKnown RBP16.83■□□□□ 0.28
CPNE1-224ENST00000483359 SCELO95171 688 aa16.83■□□□□ 0.28
CPNE1-224ENST00000483359 BMP10O95393 424 aa16.83■□□□□ 0.28
CPNE1-224ENST00000483359 ONECUT2O95948 504 aa16.83■□□□□ 0.28
CPNE1-224ENST00000483359 ALBP02768 609 aa16.83■□□□□ 0.28
CPNE1-224ENST00000483359 RAB40ALP0C0E4 278 aa16.83■□□□□ 0.28
CPNE1-224ENST00000483359 ITPKBP27987 946 aa16.83■□□□□ 0.28
CPNE1-224ENST00000483359 TSFMP43897 325 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms