RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 VBP1P61758 197 aa14.04□□□□□ -0.16
HDAC6-220ENST00000477528 RPA4Q13156 261 aa14.04□□□□□ -0.16
HDAC6-220ENST00000477528 CYP27C1Q4G0S4 372 aa14.04□□□□□ -0.16
HDAC6-220ENST00000477528 NR4A3Q92570 626 aa14.04□□□□□ -0.16
HDAC6-220ENST00000477528 KCNS3Q9BQ31 491 aa14.04□□□□□ -0.16
HDAC6-220ENST00000477528 SPRTNQ9H040 489 aaPredicted RBP14.04□□□□□ -0.16
HDAC6-220ENST00000477528 PREBQ9HCU5 417 aa14.04□□□□□ -0.16
HDAC6-220ENST00000477528 MITFO75030 526 aaPredicted RBP14.04□□□□□ -0.16
HDAC6-220ENST00000477528 MAP2K4P45985 399 aa14.04□□□□□ -0.16
HDAC6-220ENST00000477528 MXD1Q05195 221 aa14.04□□□□□ -0.16
HDAC6-220ENST00000477528 TRIM46Q7Z4K8 759 aa14.04□□□□□ -0.16
HDAC6-220ENST00000477528 FGD2Q7Z6J4 655 aa14.04□□□□□ -0.16
HDAC6-220ENST00000477528 FLCNQ8NFG4 579 aa14.04□□□□□ -0.16
HDAC6-220ENST00000477528 OR4E2Q8NGC2 313 aa14.04□□□□□ -0.16
HDAC6-220ENST00000477528 GPR151Q8TDV0 419 aa14.04□□□□□ -0.16
HDAC6-220ENST00000477528 BADQ92934 168 aa14.04□□□□□ -0.16
HDAC6-220ENST00000477528 MOAP1Q96BY2 351 aa14.04□□□□□ -0.16
HDAC6-220ENST00000477528 TCEAL4Q96EI5 215 aa14.04□□□□□ -0.16
HDAC6-220ENST00000477528 SAMD11Q96NU1 681 aa14.04□□□□□ -0.16
HDAC6-220ENST00000477528 ZNF451Q9Y4E5 1061 aa14.04□□□□□ -0.16
HDAC6-220ENST00000477528 ACOX3O15254 700 aa14.04□□□□□ -0.16
HDAC6-220ENST00000477528 KAT7O95251 611 aa14.04□□□□□ -0.16
HDAC6-220ENST00000477528 HMGN1P05114 100 aa14.04□□□□□ -0.16
HDAC6-220ENST00000477528 RORCP51449 518 aa14.04□□□□□ -0.16
HDAC6-220ENST00000477528 CTSCP53634 463 aa14.04□□□□□ -0.16
HDAC6-220ENST00000477528 RPS21P63220 83 aaKnown RBP14.04□□□□□ -0.16
HDAC6-220ENST00000477528 ZNF404Q494X3 552 aa14.04□□□□□ -0.16
HDAC6-220ENST00000477528 CATSPEREQ5SY80 951 aa14.04□□□□□ -0.16
HDAC6-220ENST00000477528 MYEOVQ96EZ4 313 aa14.04□□□□□ -0.16
HDAC6-220ENST00000477528 SNTG1Q9NSN8 517 aa14.04□□□□□ -0.16
HDAC6-220ENST00000477528 ACSL6Q9UKU0 697 aa14.04□□□□□ -0.16
HDAC6-220ENST00000477528 CEPT1Q9Y6K0 416 aa14.04□□□□□ -0.16
HDAC6-220ENST00000477528 POLR2AP24928 1970 aaKnown RBP14.03□□□□□ -0.16
HDAC6-220ENST00000477528 A0A0J9YVX5 310 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 IGLON5A6NGN9 336 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 EPCAMP16422 314 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 RHCEP18577 417 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 ITGB7P26010 798 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 ST3GAL3Q11203 375 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 GRIN2CQ14957 1233 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 TSTQ16762 297 aaKnown RBP14.03□□□□□ -0.16
HDAC6-220ENST00000477528 UGT3A2Q3SY77 523 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 CRTC2Q53ET0 693 aaPredicted RBP14.03□□□□□ -0.16
HDAC6-220ENST00000477528 ATG14Q6ZNE5 492 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 BBS10Q8TAM1 723 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 WFDC5Q8TCV5 224 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 MND1Q9BWT6 205 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 C1QTNF3Q9BXJ4 246 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 XKR8Q9H6D3 395 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 FBXL21Q9UKT6 434 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 AP1G1O43747 822 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 GPR37L1O60883 481 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 SOX14O95416 240 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 DGKEP52429 567 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 SCN1BQ07699 218 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 TMC8Q8IU68 726 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 MRPL43Q8N983 215 aaKnown RBP14.03□□□□□ -0.16
HDAC6-220ENST00000477528 MAL2Q969L2 176 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 NEIL2Q969S2 332 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 DTD2Q96FN9 168 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 ZNF583Q96ND8 569 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 CCDC115Q96NT0 180 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 DEPDC7Q96QD5 511 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 SPIN1Q9Y657 262 aaPredicted RBP14.03□□□□□ -0.16
HDAC6-220ENST00000477528 RNASET2O00584 256 aaKnown RBP14.03□□□□□ -0.16
HDAC6-220ENST00000477528 HOXB2P14652 356 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 IRAK1BP1Q5VVH5 260 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 RTL4Q6ZR62 310 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 PARS2Q7L3T8 475 aaKnown RBP14.03□□□□□ -0.16
HDAC6-220ENST00000477528 ZSWIM9Q86XI8 627 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 DCP2Q8IU60 420 aaKnown RBP14.03□□□□□ -0.16
HDAC6-220ENST00000477528 NAGSQ8N159 534 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 CADM2Q8N3J6 435 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 FEVQ99581 238 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 FUNDC2Q9BWH2 189 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 MS4A12Q9NXJ0 267 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 GIN1Q9NXP7 522 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 STT3AP46977 705 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 PRLHRP49683 370 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 ST3GAL4Q11206 333 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 C6orf120Q7Z4R8 191 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 ZNF548Q8NEK5 533 aaPredicted RBP14.03□□□□□ -0.16
HDAC6-220ENST00000477528 OR2A12Q8NGT7 310 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 EGLN2Q96KS0 407 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 TNFRSF12AQ9NP84 129 aa14.03□□□□□ -0.16
HDAC6-220ENST00000477528 LYARQ9NX58 379 aaKnown RBP14.03□□□□□ -0.16
HDAC6-220ENST00000477528 MRTO4Q9UKD2 239 aaKnown RBP14.03□□□□□ -0.16
HDAC6-220ENST00000477528 MRPS7Q9Y2R9 242 aaKnown RBP14.03□□□□□ -0.16
HDAC6-220ENST00000477528 A0A1W2PP55 124 aa14.02□□□□□ -0.16
HDAC6-220ENST00000477528 FAM170BA6NMN3 283 aa14.02□□□□□ -0.16
HDAC6-220ENST00000477528 FAAHO00519 579 aa14.02□□□□□ -0.16
HDAC6-220ENST00000477528 C8orf89P0DMQ9 161 aa14.02□□□□□ -0.16
HDAC6-220ENST00000477528 HRH2P25021 359 aa14.02□□□□□ -0.16
HDAC6-220ENST00000477528 SHMT2P34897 504 aa14.02□□□□□ -0.16
HDAC6-220ENST00000477528 ABATP80404 500 aa14.02□□□□□ -0.16
HDAC6-220ENST00000477528 NFATC3Q12968 1075 aa14.02□□□□□ -0.16
HDAC6-220ENST00000477528 TPRG1LQ5T0D9 272 aa14.02□□□□□ -0.16
HDAC6-220ENST00000477528 KHDRBS2Q5VWX1 349 aaKnown RBP14.02□□□□□ -0.16
HDAC6-220ENST00000477528 CAPSLQ8WWF8 208 aa14.02□□□□□ -0.16
HDAC6-220ENST00000477528 TMCO6Q96DC7 493 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms