RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 PCDHGB4Q9UN71 923 aa17.13■□□□□ 0.33
VARS2-206ENST00000473916 SNX7Q9UNH6 387 aa17.13■□□□□ 0.33
VARS2-206ENST00000473916 AP3M1Q9Y2T2 418 aa17.13■□□□□ 0.33
VARS2-206ENST00000473916 PCDHGB5Q9Y5G0 923 aa17.13■□□□□ 0.33
VARS2-206ENST00000473916 A0A1W2PRB8 838 aa17.13■□□□□ 0.33
VARS2-206ENST00000473916 ZW10O43264 779 aa17.13■□□□□ 0.33
VARS2-206ENST00000473916 SH3BP5O60239 455 aa17.13■□□□□ 0.33
VARS2-206ENST00000473916 ZCCHC18P0CG32 403 aa17.13■□□□□ 0.33
VARS2-206ENST00000473916 AHRP35869 848 aa17.13■□□□□ 0.33
VARS2-206ENST00000473916 RGNQ15493 299 aa17.13■□□□□ 0.33
VARS2-206ENST00000473916 FCRL6Q6DN72 434 aa17.13■□□□□ 0.33
VARS2-206ENST00000473916 FBXO42Q6P3S6 717 aa17.13■□□□□ 0.33
VARS2-206ENST00000473916 ZNF438Q7Z4V0 828 aa17.13■□□□□ 0.33
VARS2-206ENST00000473916 SPEM1Q8N4L4 309 aa17.13■□□□□ 0.33
VARS2-206ENST00000473916 CATSPER1Q8NEC5 780 aa17.13■□□□□ 0.33
VARS2-206ENST00000473916 GOT1L1Q8NHS2 421 aaPredicted RBP17.13■□□□□ 0.33
VARS2-206ENST00000473916 MTERF3Q96E29 417 aa17.13■□□□□ 0.33
VARS2-206ENST00000473916 SARGQ9BW04 601 aa17.13■□□□□ 0.33
VARS2-206ENST00000473916 PRDM7Q9NQW5 492 aa17.13■□□□□ 0.33
VARS2-206ENST00000473916 POT1Q9NUX5 634 aa17.13■□□□□ 0.33
VARS2-206ENST00000473916 DCAF13Q9NV06 445 aaKnown RBP17.13■□□□□ 0.33
VARS2-206ENST00000473916 RAPGEFL1Q9UHV5 662 aa17.13■□□□□ 0.33
VARS2-206ENST00000473916 GLOD5A6NK44 160 aa17.12■□□□□ 0.33
VARS2-206ENST00000473916 UBTFL6P0CB48 400 aaPredicted RBP17.12■□□□□ 0.33
VARS2-206ENST00000473916 CERS1P27544 350 aa17.12■□□□□ 0.33
VARS2-206ENST00000473916 CD38P28907 300 aa17.12■□□□□ 0.33
VARS2-206ENST00000473916 RPL3P39023 403 aaKnown RBP17.12■□□□□ 0.33
VARS2-206ENST00000473916 GK3PQ14409 553 aa17.12■□□□□ 0.33
VARS2-206ENST00000473916 KIR2DS3Q14952 304 aa17.12■□□□□ 0.33
VARS2-206ENST00000473916 VMACQ2NL98 169 aa17.12■□□□□ 0.33
VARS2-206ENST00000473916 PUS10Q3MIT2 529 aaKnown RBP17.12■□□□□ 0.33
VARS2-206ENST00000473916 LRRC23Q53EV4 343 aaPredicted RBP17.12■□□□□ 0.33
VARS2-206ENST00000473916 ABHD17CQ6PCB6 329 aa17.12■□□□□ 0.33
VARS2-206ENST00000473916 ZDHHC1Q8WTX9 485 aa17.12■□□□□ 0.33
VARS2-206ENST00000473916 ZNF282Q9UDV7 671 aaPredicted RBP17.12■□□□□ 0.33
VARS2-206ENST00000473916 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.11■□□□□ 0.33
VARS2-206ENST00000473916 P2RX6O15547 441 aa17.11■□□□□ 0.33
VARS2-206ENST00000473916 ETFAP13804 333 aa17.11■□□□□ 0.33
VARS2-206ENST00000473916 PTGER1P34995 402 aa17.11■□□□□ 0.33
VARS2-206ENST00000473916 SOAT1P35610 550 aa17.11■□□□□ 0.33
VARS2-206ENST00000473916 NUDT1P36639 197 aa17.11■□□□□ 0.33
VARS2-206ENST00000473916 MAZP56270 477 aaKnown RBP17.11■□□□□ 0.33
VARS2-206ENST00000473916 ATP6AP1Q15904 470 aa17.11■□□□□ 0.33
VARS2-206ENST00000473916 FAM98BQ52LJ0 330 aaKnown RBP17.11■□□□□ 0.33
VARS2-206ENST00000473916 CPZQ66K79 652 aa17.11■□□□□ 0.33
VARS2-206ENST00000473916 ISLR2Q6UXK2 745 aa17.11■□□□□ 0.33
VARS2-206ENST00000473916 TMEFF1Q8IYR6 380 aa17.11■□□□□ 0.33
VARS2-206ENST00000473916 CBR4Q8N4T8 237 aa17.11■□□□□ 0.33
VARS2-206ENST00000473916 CLDN23Q96B33 292 aa17.11■□□□□ 0.33
VARS2-206ENST00000473916 SLC47A1Q96FL8 570 aa17.11■□□□□ 0.33
VARS2-206ENST00000473916 CENPNQ96H22 339 aaPredicted RBP17.11■□□□□ 0.33
VARS2-206ENST00000473916 CXorf36Q9H7Y0 433 aa17.11■□□□□ 0.33
VARS2-206ENST00000473916 TAS2R9Q9NYW1 312 aa17.11■□□□□ 0.33
VARS2-206ENST00000473916 A0A0J9YVX5 310 aa17.11■□□□□ 0.33
VARS2-206ENST00000473916 OR2A25A4D2G3 310 aa17.11■□□□□ 0.33
VARS2-206ENST00000473916 ACOX3O15254 700 aa17.11■□□□□ 0.33
VARS2-206ENST00000473916 RETP07949 1114 aa17.11■□□□□ 0.33
VARS2-206ENST00000473916 FAM58BPP0C7Q3 252 aa17.11■□□□□ 0.33
VARS2-206ENST00000473916 RAP2AP10114 183 aa17.11■□□□□ 0.33
VARS2-206ENST00000473916 ATP5A1P25705 553 aaKnown RBP17.11■□□□□ 0.33
VARS2-206ENST00000473916 TMEM35AQ53FP2 167 aa17.11■□□□□ 0.33
VARS2-206ENST00000473916 NDUFAF5Q5TEU4 345 aa17.11■□□□□ 0.33
VARS2-206ENST00000473916 ZBTB49Q6ZSB9 765 aa17.11■□□□□ 0.33
VARS2-206ENST00000473916 ACOT4Q8N9L9 421 aa17.11■□□□□ 0.33
VARS2-206ENST00000473916 VPS50Q96JG6 964 aa17.11■□□□□ 0.33
VARS2-206ENST00000473916 QRFPRQ96P65 431 aa17.11■□□□□ 0.33
VARS2-206ENST00000473916 NELL2Q99435 816 aa17.11■□□□□ 0.33
VARS2-206ENST00000473916 NTN4Q9HB63 628 aa17.11■□□□□ 0.33
VARS2-206ENST00000473916 ADAM29Q9UKF5 820 aa17.11■□□□□ 0.33
VARS2-206ENST00000473916 ATG4BQ9Y4P1 393 aa17.11■□□□□ 0.33
VARS2-206ENST00000473916 SNX8Q9Y5X2 465 aa17.11■□□□□ 0.33
VARS2-206ENST00000473916 AP4B1Q9Y6B7 739 aa17.11■□□□□ 0.33
VARS2-206ENST00000473916 CCDC88CQ9P219 2028 aa17.1■□□□□ 0.33
VARS2-206ENST00000473916 TYRP1P17643 537 aa17.1■□□□□ 0.33
VARS2-206ENST00000473916 HIST1H1TP22492 207 aaPredicted RBP17.1■□□□□ 0.33
VARS2-206ENST00000473916 AQP1P29972 269 aa17.1■□□□□ 0.33
VARS2-206ENST00000473916 CRATP43155 626 aa17.1■□□□□ 0.33
VARS2-206ENST00000473916 CRYBA2P53672 197 aa17.1■□□□□ 0.33
VARS2-206ENST00000473916 HHEXQ03014 270 aa17.1■□□□□ 0.33
VARS2-206ENST00000473916 CHRNB3Q05901 458 aa17.1■□□□□ 0.33
VARS2-206ENST00000473916 SLAMF1Q13291 335 aa17.1■□□□□ 0.33
VARS2-206ENST00000473916 HEPACAMQ14CZ8 416 aa17.1■□□□□ 0.33
VARS2-206ENST00000473916 SLC5A12Q1EHB4 618 aa17.1■□□□□ 0.33
VARS2-206ENST00000473916 FRMPD2BQ6IN97 320 aa17.1■□□□□ 0.33
VARS2-206ENST00000473916 IRGCQ6NXR0 463 aa17.1■□□□□ 0.33
VARS2-206ENST00000473916 MFSD2AQ8NA29 543 aa17.1■□□□□ 0.33
VARS2-206ENST00000473916 OR2L5Q8NG80 312 aa17.1■□□□□ 0.33
VARS2-206ENST00000473916 RSC1A1Q92681 617 aa17.1■□□□□ 0.33
VARS2-206ENST00000473916 SLC22A18Q96BI1 424 aa17.1■□□□□ 0.33
VARS2-206ENST00000473916 BTBD9Q96Q07 612 aa17.1■□□□□ 0.33
VARS2-206ENST00000473916 TM9SF3Q9HD45 589 aa17.1■□□□□ 0.33
VARS2-206ENST00000473916 HRASLS2Q9NWW9 162 aa17.1■□□□□ 0.33
VARS2-206ENST00000473916 MUTYHQ9UIF7 546 aa17.1■□□□□ 0.33
VARS2-206ENST00000473916 MAP4K5Q9Y4K4 846 aa17.1■□□□□ 0.33
VARS2-206ENST00000473916 THADAQ6YHU6 1953 aa17.1■□□□□ 0.33
VARS2-206ENST00000473916 VPS13AQ96RL7 3174 aa17.1■□□□□ 0.33
VARS2-206ENST00000473916 LOC105369274A0A096LPK9 316 aa17.09■□□□□ 0.33
VARS2-206ENST00000473916 KIR2DS5A0A0G2JLQ3 304 aa17.09■□□□□ 0.33
VARS2-206ENST00000473916 A0A0G2JNG1 304 aa17.09■□□□□ 0.33
VARS2-206ENST00000473916 LOC102723532A0A0G2JNH3 316 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms