RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 PRKNO60260 465 aaPredicted RBP5.94□□□□□ -1.46
SMC5-202ENST00000471372 TSHBP01222 138 aa5.94□□□□□ -1.46
SMC5-202ENST00000471372 CALCAP01258 141 aa5.94□□□□□ -1.46
SMC5-202ENST00000471372 PDHBP11177 359 aa5.94□□□□□ -1.46
SMC5-202ENST00000471372 RALAP11233 206 aa5.94□□□□□ -1.46
SMC5-202ENST00000471372 PRDX2P32119 198 aa5.94□□□□□ -1.46
SMC5-202ENST00000471372 LTBQ06643 244 aa5.94□□□□□ -1.46
SMC5-202ENST00000471372 GPR17Q13304 367 aa5.94□□□□□ -1.46
SMC5-202ENST00000471372 SNX1Q13596 522 aa5.94□□□□□ -1.46
SMC5-202ENST00000471372 TRIM29Q14134 588 aa5.94□□□□□ -1.46
SMC5-202ENST00000471372 USH1GQ495M9 461 aa5.94□□□□□ -1.46
SMC5-202ENST00000471372 CAPRIN2Q6IMN6 1127 aaKnown RBP5.94□□□□□ -1.46
SMC5-202ENST00000471372 CYP4V2Q6ZWL3 525 aaPredicted RBP5.94□□□□□ -1.46
SMC5-202ENST00000471372 G2E3Q7L622 706 aa5.94□□□□□ -1.46
SMC5-202ENST00000471372 ERASQ7Z444 233 aa5.94□□□□□ -1.46
SMC5-202ENST00000471372 TRMT11Q7Z4G4 463 aaKnown RBP5.94□□□□□ -1.46
SMC5-202ENST00000471372 ISCA2Q86U28 154 aa5.94□□□□□ -1.46
SMC5-202ENST00000471372 PIGZQ86VD9 579 aa5.94□□□□□ -1.46
SMC5-202ENST00000471372 GPC2Q8N158 579 aa5.94□□□□□ -1.46
SMC5-202ENST00000471372 IQCF1Q8N6M8 205 aa5.94□□□□□ -1.46
SMC5-202ENST00000471372 SLC37A3Q8NCC5 494 aa5.94□□□□□ -1.46
SMC5-202ENST00000471372 OR13C5Q8NGS8 318 aa5.94□□□□□ -1.46
SMC5-202ENST00000471372 SECTM1Q8WVN6 248 aa5.94□□□□□ -1.46
SMC5-202ENST00000471372 IL17FQ96PD4 163 aa5.94□□□□□ -1.46
SMC5-202ENST00000471372 AGPAT1Q99943 283 aa5.94□□□□□ -1.46
SMC5-202ENST00000471372 JPH2Q9BR39 696 aaPredicted RBP5.94□□□□□ -1.46
SMC5-202ENST00000471372 RAB33BQ9H082 229 aa5.94□□□□□ -1.46
SMC5-202ENST00000471372 SLC52A3Q9NQ40 469 aa5.94□□□□□ -1.46
SMC5-202ENST00000471372 DCAF16Q9NXF7 216 aa5.94□□□□□ -1.46
SMC5-202ENST00000471372 PLEK2Q9NYT0 353 aa5.94□□□□□ -1.46
SMC5-202ENST00000471372 ZNF624Q9P2J8 865 aaPredicted RBP5.94□□□□□ -1.46
SMC5-202ENST00000471372 ATXN10Q9UBB4 475 aa5.94□□□□□ -1.46
SMC5-202ENST00000471372 TEKT2Q9UIF3 430 aa5.94□□□□□ -1.46
SMC5-202ENST00000471372 MAN1B1Q9UKM7 699 aa5.94□□□□□ -1.46
SMC5-202ENST00000471372 TRBV4-1A0A0J9YWV2 114 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 A0A0U1RQV5 110 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 CLRN2A0PK11 232 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 PRAC2D3DTV9 90 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 GLRA3O75311 464 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 VPS26AO75436 327 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 CDK2AP2O75956 126 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 APBB3O95704 486 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 TXNDC12O95881 172 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 SERPINF2P08697 491 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 GSTA2P09210 222 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 CT45A8P0DMV1 189 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 CT45A9P0DMV2 189 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 IGHV4-38-2P0DP08 117 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 FBLP22087 321 aaKnown RBP5.93□□□□□ -1.46
SMC5-202ENST00000471372 ACKR3P25106 362 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 MYBPC1Q00872 1141 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 HSF2Q03933 536 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 AGKQ53H12 422 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 CT45A2Q5DJT8 189 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 C9orf50Q5SZB4 431 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 IL23RQ5VWK5 629 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 LIPKQ5VXJ0 399 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 CES3Q6UWW8 571 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 TMEM207Q6UWW9 146 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 CDHR3Q6ZTQ4 885 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 YRDCQ86U90 279 aaKnown RBP5.93□□□□□ -1.46
SMC5-202ENST00000471372 MISPQ8IVT2 679 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 KIRREL3Q8IZU9 778 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 CERS5Q8N5B7 392 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 GANCQ8TET4 914 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 SLC5A11Q8WWX8 675 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 SHC3Q92529 594 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 PHYHIPQ92561 330 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 TMEM143Q96AN5 459 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 MAGED4Q96JG8 741 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 MARK4Q96L34 752 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 ZNF778Q96MU6 729 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 ZNF48Q96MX3 618 aaPredicted RBP5.93□□□□□ -1.46
SMC5-202ENST00000471372 S1PR3Q99500 378 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 CBWD1Q9BRT8 395 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 HPS4Q9NQG7 708 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.93□□□□□ -1.46
SMC5-202ENST00000471372 EXTL2Q9UBQ6 330 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 MRTO4Q9UKD2 239 aaKnown RBP5.93□□□□□ -1.46
SMC5-202ENST00000471372 PRDM4Q9UKN5 801 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 POMT2Q9UKY4 750 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 WDR37Q9Y2I8 494 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 COL3A1P02461 1466 aaPredicted RBP5.93□□□□□ -1.46
SMC5-202ENST00000471372 SPATA31D1Q6ZQQ2 1576 aa5.93□□□□□ -1.46
SMC5-202ENST00000471372 RAD54L2Q9Y4B4 1467 aa5.92□□□□□ -1.46
SMC5-202ENST00000471372 FAM230AA0A1W2PPH8 454 aa5.92□□□□□ -1.46
SMC5-202ENST00000471372 EPHB6O15197 1021 aa5.92□□□□□ -1.46
SMC5-202ENST00000471372 TLX2O43763 284 aaPredicted RBP5.92□□□□□ -1.46
SMC5-202ENST00000471372 SAP30O75446 220 aa5.92□□□□□ -1.46
SMC5-202ENST00000471372 PPP1R3DO95685 299 aa5.92□□□□□ -1.46
SMC5-202ENST00000471372 CALCBP10092 127 aa5.92□□□□□ -1.46
SMC5-202ENST00000471372 EPB41P11171 864 aaKnown RBP5.92□□□□□ -1.46
SMC5-202ENST00000471372 HNRNPA2B1P22626 353 aaKnown RBP5.92□□□□□ -1.46
SMC5-202ENST00000471372 IL4RP24394 825 aa5.92□□□□□ -1.46
SMC5-202ENST00000471372 PTPN4P29074 926 aa5.92□□□□□ -1.46
SMC5-202ENST00000471372 C21orf58P58505 322 aa5.92□□□□□ -1.46
SMC5-202ENST00000471372 DSCR9P59020 149 aa5.92□□□□□ -1.46
SMC5-202ENST00000471372 ACTR1AP61163 376 aa5.92□□□□□ -1.46
SMC5-202ENST00000471372 HERV-K104P61576 105 aa5.92□□□□□ -1.46
SMC5-202ENST00000471372 BTG1P62324 171 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms