RNA–Protein interactions for RNA: ENST00000466845.1

LRCH3-212, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 662 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-212ENST00000466845 PDK4Q16654 411 aa5.44□□□□□ -1.54
LRCH3-212ENST00000466845 TMEM44Q2T9K0 475 aa5.44□□□□□ -1.54
LRCH3-212ENST00000466845 LACTB2Q53H82 288 aaPredicted RBP5.44□□□□□ -1.54
LRCH3-212ENST00000466845 NKAIN2Q5VXU1 208 aa5.44□□□□□ -1.54
LRCH3-212ENST00000466845 ARL6IP4Q66PJ3 421 aaKnown RBP5.44□□□□□ -1.54
LRCH3-212ENST00000466845 B3GNTL1Q67FW5 361 aaPredicted RBP5.44□□□□□ -1.54
LRCH3-212ENST00000466845 NADSYN1Q6IA69 706 aa5.44□□□□□ -1.54
LRCH3-212ENST00000466845 MRNIPQ6NTE8 343 aa5.44□□□□□ -1.54
LRCH3-212ENST00000466845 TMEM71Q6P5X7 295 aa5.44□□□□□ -1.54
LRCH3-212ENST00000466845 SYT13Q7L8C5 426 aa5.44□□□□□ -1.54
LRCH3-212ENST00000466845 SMG6Q86US8 1419 aaKnown RBP5.44□□□□□ -1.54
LRCH3-212ENST00000466845 TMC8Q8IU68 726 aa5.44□□□□□ -1.54
LRCH3-212ENST00000466845 VSTM4Q8IW00 320 aa5.44□□□□□ -1.54
LRCH3-212ENST00000466845 KIRREL3Q8IZU9 778 aa5.44□□□□□ -1.54
LRCH3-212ENST00000466845 FAM58AQ8N1B3 248 aa5.44□□□□□ -1.54
LRCH3-212ENST00000466845 ELMOD1Q8N336 334 aa5.44□□□□□ -1.54
LRCH3-212ENST00000466845 DDHD1Q8NEL9 900 aa5.44□□□□□ -1.54
LRCH3-212ENST00000466845 GPRC5AQ8NFJ5 357 aa5.44□□□□□ -1.54
LRCH3-212ENST00000466845 OR6Q1Q8NGQ2 317 aa5.44□□□□□ -1.54
LRCH3-212ENST00000466845 OR13F1Q8NGS4 319 aa5.44□□□□□ -1.54
LRCH3-212ENST00000466845 SLC2A14Q8TDB8 520 aa5.44□□□□□ -1.54
LRCH3-212ENST00000466845 MYDGFQ969H8 173 aa5.44□□□□□ -1.54
LRCH3-212ENST00000466845 NMD3Q96D46 503 aaKnown RBP5.44□□□□□ -1.54
LRCH3-212ENST00000466845 DTD2Q96FN9 168 aa5.44□□□□□ -1.54
LRCH3-212ENST00000466845 MRGPRX1Q96LB2 322 aa5.44□□□□□ -1.54
LRCH3-212ENST00000466845 TEFMQ96QE5 360 aaKnown RBP5.44□□□□□ -1.54
LRCH3-212ENST00000466845 SEC22CQ9BRL7 303 aa5.44□□□□□ -1.54
LRCH3-212ENST00000466845 TUBGCP2Q9BSJ2 902 aa5.44□□□□□ -1.54
LRCH3-212ENST00000466845 EGLN1Q9GZT9 426 aa5.44□□□□□ -1.54
LRCH3-212ENST00000466845 TTYH1Q9H313 450 aaPredicted RBP5.44□□□□□ -1.54
LRCH3-212ENST00000466845 TP63Q9H3D4 680 aaPredicted RBP5.44□□□□□ -1.54
LRCH3-212ENST00000466845 MED20Q9H944 212 aa5.44□□□□□ -1.54
LRCH3-212ENST00000466845 CCNB1IP1Q9NPC3 277 aa5.44□□□□□ -1.54
LRCH3-212ENST00000466845 CHRAC1Q9NRG0 131 aa5.44□□□□□ -1.54
LRCH3-212ENST00000466845 SAMSN1Q9NSI8 373 aaKnown RBP5.44□□□□□ -1.54
LRCH3-212ENST00000466845 UFSP2Q9NUQ7 469 aa5.44□□□□□ -1.54
LRCH3-212ENST00000466845 SEMA5BQ9P283 1151 aa5.44□□□□□ -1.54
LRCH3-212ENST00000466845 CTNNAL1Q9UBT7 734 aa5.44□□□□□ -1.54
LRCH3-212ENST00000466845 SLC25A10Q9UBX3 287 aaPredicted RBP5.44□□□□□ -1.54
LRCH3-212ENST00000466845 TESQ9UGI8 421 aaKnown RBP5.44□□□□□ -1.54
LRCH3-212ENST00000466845 SLC23A1Q9UHI7 598 aa5.44□□□□□ -1.54
LRCH3-212ENST00000466845 UTS2RQ9UKP6 389 aa5.44□□□□□ -1.54
LRCH3-212ENST00000466845 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.44□□□□□ -1.54
LRCH3-212ENST00000466845 MAP3K2Q9Y2U5 619 aa5.44□□□□□ -1.54
LRCH3-212ENST00000466845 ACTL7AQ9Y615 435 aa5.44□□□□□ -1.54
LRCH3-212ENST00000466845 RAD54BQ9Y620 910 aa5.44□□□□□ -1.54
LRCH3-212ENST00000466845 COL18A1P39060 1754 aa5.44□□□□□ -1.54
LRCH3-212ENST00000466845 LRP5O75197 1615 aa5.44□□□□□ -1.54
LRCH3-212ENST00000466845 CD163L1Q9NR16 1453 aa5.44□□□□□ -1.54
LRCH3-212ENST00000466845 ASTN2O75129 1339 aaPredicted RBP5.44□□□□□ -1.54
LRCH3-212ENST00000466845 FAM208AQ9UK61 1670 aaKnown RBP5.43□□□□□ -1.54
LRCH3-212ENST00000466845 ANKRD36BQ8N2N9 1353 aa5.43□□□□□ -1.54
LRCH3-212ENST00000466845 NCAPD2Q15021 1401 aa5.43□□□□□ -1.54
LRCH3-212ENST00000466845 TNS2Q63HR2 1409 aa5.43□□□□□ -1.54
LRCH3-212ENST00000466845 C17orf102A2RUQ5 167 aa5.43□□□□□ -1.54
LRCH3-212ENST00000466845 ARHGEF35A5YM69 484 aa5.43□□□□□ -1.54
LRCH3-212ENST00000466845 ANKRD61A6NGH8 418 aa5.43□□□□□ -1.54
LRCH3-212ENST00000466845 ANXA2P2A6NMY6 339 aa5.43□□□□□ -1.54
LRCH3-212ENST00000466845 PDZK1P1A8MUH7 402 aa5.43□□□□□ -1.54
LRCH3-212ENST00000466845 BECN2A8MW95 431 aa5.43□□□□□ -1.54
LRCH3-212ENST00000466845 LINC00587B1AMM8 73 aa5.43□□□□□ -1.54
LRCH3-212ENST00000466845 E7ESA3 106 aa5.43□□□□□ -1.54
LRCH3-212ENST00000466845 QSOX1O00391 747 aa5.43□□□□□ -1.54
LRCH3-212ENST00000466845 CLIC2O15247 247 aa5.43□□□□□ -1.54
LRCH3-212ENST00000466845 DFNA5O60443 496 aa5.43□□□□□ -1.54
LRCH3-212ENST00000466845 CCNT2O60583 730 aaKnown RBP5.43□□□□□ -1.54
LRCH3-212ENST00000466845 HCN1O60741 890 aa5.43□□□□□ -1.54
LRCH3-212ENST00000466845 NME6O75414 186 aaPredicted RBP5.43□□□□□ -1.54
LRCH3-212ENST00000466845 CSDE1O75534 798 aaKnown RBP5.43□□□□□ -1.54
LRCH3-212ENST00000466845 WBP4O75554 376 aaKnown RBP5.43□□□□□ -1.54
LRCH3-212ENST00000466845 KDM4BO94953 1096 aa5.43□□□□□ -1.54
LRCH3-212ENST00000466845 CXCL14O95715 111 aa5.43□□□□□ -1.54
LRCH3-212ENST00000466845 SNAP29O95721 258 aa5.43□□□□□ -1.54
LRCH3-212ENST00000466845 MBD3O95983 291 aa5.43□□□□□ -1.54
LRCH3-212ENST00000466845 LCATP04180 440 aa5.43□□□□□ -1.54
LRCH3-212ENST00000466845 CALB1P05937 261 aa5.43□□□□□ -1.54
LRCH3-212ENST00000466845 RNF224P0DH78 156 aa5.43□□□□□ -1.54
LRCH3-212ENST00000466845 MCF2P10911 925 aa5.43□□□□□ -1.54
LRCH3-212ENST00000466845 GABRB1P18505 474 aa5.43□□□□□ -1.54
LRCH3-212ENST00000466845 ITIH1P19827 911 aa5.43□□□□□ -1.54
LRCH3-212ENST00000466845 CNR1P21554 472 aa5.43□□□□□ -1.54
LRCH3-212ENST00000466845 CD38P28907 300 aa5.43□□□□□ -1.54
LRCH3-212ENST00000466845 GNA11P29992 359 aa5.43□□□□□ -1.54
LRCH3-212ENST00000466845 OR1E1P30953 314 aa5.43□□□□□ -1.54
LRCH3-212ENST00000466845 CXCR5P32302 372 aa5.43□□□□□ -1.54
LRCH3-212ENST00000466845 MPLP40238 635 aa5.43□□□□□ -1.54
LRCH3-212ENST00000466845 EIF2S3P41091 472 aaKnown RBP5.43□□□□□ -1.54
LRCH3-212ENST00000466845 ACTR1BP42025 376 aa5.43□□□□□ -1.54
LRCH3-212ENST00000466845 HK3P52790 923 aa5.43□□□□□ -1.54
LRCH3-212ENST00000466845 NKX2-5P52952 324 aaPredicted RBP5.43□□□□□ -1.54
LRCH3-212ENST00000466845 CEBPGP53567 150 aa5.43□□□□□ -1.54
LRCH3-212ENST00000466845 ELLP55199 621 aaPredicted RBP5.43□□□□□ -1.54
LRCH3-212ENST00000466845 CXCR4P61073 352 aa5.43□□□□□ -1.54
LRCH3-212ENST00000466845 RPL10AP62906 217 aaKnown RBP5.43□□□□□ -1.54
LRCH3-212ENST00000466845 REEP5Q00765 189 aa5.43□□□□□ -1.54
LRCH3-212ENST00000466845 CDH17Q12864 832 aa5.43□□□□□ -1.54
LRCH3-212ENST00000466845 TMEM115Q12893 351 aaPredicted RBP5.43□□□□□ -1.54
LRCH3-212ENST00000466845 PPP1R3AQ16821 1122 aa5.43□□□□□ -1.54
LRCH3-212ENST00000466845 PDLIM3Q53GG5 364 aaPredicted RBP5.43□□□□□ -1.54
LRCH3-212ENST00000466845 CCNYL2Q5T2Q4 361 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms