RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 IKZF3Q9UKT9 509 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 CKAP5Q14008 2032 aa7.1□□□□□ -1.27
UBE4B-204ENST00000462658 VPS13AQ96RL7 3174 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 CACNA1HO95180 2353 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 NEMP2A6NFY4 417 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 OR2AG2A6NM03 316 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 SYCE1LA8MT33 242 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 A8MT66 165 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 TMEM114B3SHH9 223 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 SUPT3HB4E1H0 165 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 ITM2AO43736 263 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 VEGFDO43915 354 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 SNX3O60493 162 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 KERAO60938 352 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 SUPT3HO75486 399 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 TGDSO95455 350 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 PDGFBP01127 241 aaPredicted RBP7.09□□□□□ -1.27
UBE4B-204ENST00000462658 TEAD1P28347 426 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 SERPINB3P29508 390 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 PTH2RP49190 550 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 PRLHRP49683 370 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 TPMTP51580 245 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 CTSCP53634 463 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 NAGLUP54802 743 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 DNAJB13P59910 316 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 ABCE1P61221 599 aaKnown RBP7.09□□□□□ -1.27
UBE4B-204ENST00000462658 OVGP1Q12889 678 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 CCNIQ14094 377 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 IRF4Q15306 451 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 TSNQ15631 228 aaKnown RBP7.09□□□□□ -1.27
UBE4B-204ENST00000462658 PLEKHS1Q5SXH7 462 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 CGB2Q6NT52 195 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 CYHR1Q6ZMK1 362 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 PIWIL4Q7Z3Z4 852 aaKnown RBP7.09□□□□□ -1.27
UBE4B-204ENST00000462658 SPATA21Q7Z572 469 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 TRIM74Q86UV6 250 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 GPSM1Q86YR5 675 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 CRLF3Q8IUI8 442 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 UBALD2Q8IYN6 164 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 CCNYL1Q8N7R7 359 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 SIMC1Q8NDZ2 872 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 PPP4R1Q8TF05 950 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 ASB12Q8WXK4 309 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 ELMO1Q92556 727 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 EXT2Q93063 718 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 PHF21BQ96EK2 531 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 COX14Q96I36 57 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 ZNF514Q96K75 400 aaPredicted RBP7.09□□□□□ -1.27
UBE4B-204ENST00000462658 C7orf26Q96N11 449 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 ATOH8Q96SQ7 321 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 CCM2Q9BSQ5 444 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 C1QTNF7Q9BXJ2 289 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 C20orf27Q9GZN8 174 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 OR2AG1Q9H205 316 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 MBNL1Q9NR56 388 aaKnown RBP7.09□□□□□ -1.27
UBE4B-204ENST00000462658 NCKIPSDQ9NZQ3 722 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 ATXN10Q9UBB4 475 aa7.09□□□□□ -1.27
UBE4B-204ENST00000462658 ZNF106Q9H2Y7 1883 aaKnown RBP7.09□□□□□ -1.28
UBE4B-204ENST00000462658 BPTFQ12830 3046 aa7.08□□□□□ -1.28
UBE4B-204ENST00000462658 LRRC72A6NJI9 287 aa7.08□□□□□ -1.28
UBE4B-204ENST00000462658 UBXN8O00124 270 aa7.08□□□□□ -1.28
UBE4B-204ENST00000462658 EIF3FO00303 357 aaPredicted RBP7.08□□□□□ -1.28
UBE4B-204ENST00000462658 SLC31A1O15431 190 aa7.08□□□□□ -1.28
UBE4B-204ENST00000462658 LYPLA1O75608 230 aaPredicted RBP7.08□□□□□ -1.28
UBE4B-204ENST00000462658 HSPA4LO95757 839 aa7.08□□□□□ -1.28
UBE4B-204ENST00000462658 EBLN1P0CF75 366 aa7.08□□□□□ -1.28
UBE4B-204ENST00000462658 MPC1LP0DKB6 136 aa7.08□□□□□ -1.28
UBE4B-204ENST00000462658 TROVE2P10155 538 aaKnown RBP eCLIP7.08□□□□□ -1.28
UBE4B-204ENST00000462658 ENO3P13929 434 aaPredicted RBP7.08□□□□□ -1.28
UBE4B-204ENST00000462658 GFAPP14136 432 aa7.08□□□□□ -1.28
UBE4B-204ENST00000462658 ZNF8P17098 575 aaPredicted RBP7.08□□□□□ -1.28
UBE4B-204ENST00000462658 IMPDH1P20839 514 aa7.08□□□□□ -1.28
UBE4B-204ENST00000462658 MAT2AP31153 395 aaKnown RBP7.08□□□□□ -1.28
UBE4B-204ENST00000462658 PRKAR1BP31321 381 aa7.08□□□□□ -1.28
UBE4B-204ENST00000462658 UQCRC1P31930 480 aa7.08□□□□□ -1.28
UBE4B-204ENST00000462658 ACSL1P33121 698 aa7.08□□□□□ -1.28
UBE4B-204ENST00000462658 TRIM23P36406 574 aa7.08□□□□□ -1.28
UBE4B-204ENST00000462658 CDK3Q00526 305 aa7.08□□□□□ -1.28
UBE4B-204ENST00000462658 HSPA14Q0VDF9 509 aa7.08□□□□□ -1.28
UBE4B-204ENST00000462658 PFKFB4Q16877 469 aa7.08□□□□□ -1.28
UBE4B-204ENST00000462658 BCL7AQ4VC05 210 aa7.08□□□□□ -1.28
UBE4B-204ENST00000462658 CFAP157Q5JU67 520 aa7.08□□□□□ -1.28
UBE4B-204ENST00000462658 ANO7Q6IWH7 933 aa7.08□□□□□ -1.28
UBE4B-204ENST00000462658 FRA10AC1Q70Z53 315 aa7.08□□□□□ -1.28
UBE4B-204ENST00000462658 ZNF771Q7L3S4 317 aaPredicted RBP7.08□□□□□ -1.28
UBE4B-204ENST00000462658 ADAMTSL2Q86TH1 951 aa7.08□□□□□ -1.28
UBE4B-204ENST00000462658 HEATR4Q86WZ0 1026 aa7.08□□□□□ -1.28
UBE4B-204ENST00000462658 TRAPPC5Q8IUR0 188 aa7.08□□□□□ -1.28
UBE4B-204ENST00000462658 CACNA2D3Q8IZS8 1091 aa7.08□□□□□ -1.28
UBE4B-204ENST00000462658 FBXO39Q8N4B4 442 aa7.08□□□□□ -1.28
UBE4B-204ENST00000462658 CCDC197Q8NCU1 140 aa7.08□□□□□ -1.28
UBE4B-204ENST00000462658 TSTD1Q8NFU3 115 aa7.08□□□□□ -1.28
UBE4B-204ENST00000462658 OR2T34Q8NGX1 318 aa7.08□□□□□ -1.28
UBE4B-204ENST00000462658 ASZ1Q8WWH4 475 aa7.08□□□□□ -1.28
UBE4B-204ENST00000462658 MOCOSQ96EN8 888 aa7.08□□□□□ -1.28
UBE4B-204ENST00000462658 THOC1Q96FV9 657 aaKnown RBP7.08□□□□□ -1.28
UBE4B-204ENST00000462658 CNDP1Q96KN2 507 aa7.08□□□□□ -1.28
UBE4B-204ENST00000462658 SGCZQ96LD1 299 aa7.08□□□□□ -1.28
UBE4B-204ENST00000462658 DRC3Q9H069 523 aa7.08□□□□□ -1.28
UBE4B-204ENST00000462658 WDR26Q9H7D7 661 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms