RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 NMNAT1Q9HAN9 279 aaPredicted RBP18.73■□□□□ 0.59
CNEP1R1-203ENST00000458059 TIGARQ9NQ88 270 aa18.73■□□□□ 0.59
CNEP1R1-203ENST00000458059 ANXA8P13928 327 aa18.73■□□□□ 0.59
CNEP1R1-203ENST00000458059 IFITM2Q01629 132 aa18.73■□□□□ 0.59
CNEP1R1-203ENST00000458059 GRHL2Q6ISB3 625 aa18.73■□□□□ 0.59
CNEP1R1-203ENST00000458059 CFAP206Q8IYR0 622 aa18.73■□□□□ 0.59
CNEP1R1-203ENST00000458059 OR4C15Q8NGM1 316 aa18.73■□□□□ 0.59
CNEP1R1-203ENST00000458059 LYSMD1Q96S90 227 aa18.73■□□□□ 0.59
CNEP1R1-203ENST00000458059 BEX2Q9BXY8 128 aa18.73■□□□□ 0.59
CNEP1R1-203ENST00000458059 NEK6Q9HC98 313 aa18.73■□□□□ 0.59
CNEP1R1-203ENST00000458059 ZNF282Q9UDV7 671 aaPredicted RBP18.73■□□□□ 0.59
CNEP1R1-203ENST00000458059 PCDHGA3Q9Y5H0 932 aa18.73■□□□□ 0.59
CNEP1R1-203ENST00000458059 PLXND1Q9Y4D7 1925 aa18.73■□□□□ 0.59
CNEP1R1-203ENST00000458059 PRMT3O60678 531 aa18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 CATP04040 527 aaKnown RBP18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 XPAP23025 273 aaPredicted RBP18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 CDC42P60953 191 aa18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 TEAD4Q15561 434 aa18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 SSX1Q16384 188 aa18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 ANXA8L1Q5VT79 327 aa18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 GDPD4Q6W3E5 623 aa18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 DEF8Q6ZN54 512 aa18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 GPR65Q8IYL9 337 aa18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 GPR151Q8TDV0 419 aa18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 ECHDC3Q96DC8 303 aa18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 HOXD1Q9GZZ0 328 aa18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 HCFC1R1Q9NWW0 138 aa18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 FBXL12Q9NXK8 326 aa18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 KCNE2Q9Y6J6 123 aa18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 CHD7Q9P2D1 2997 aa18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 SAGE2PA6NJ88 616 aa18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 LEFTY2O00292 366 aa18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 CCNB2O95067 398 aa18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 GSTM1P09488 218 aa18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 GABRB1P18505 474 aa18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 UGT2B10P36537 528 aa18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 RECQLP46063 649 aaPredicted RBP18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 ASMTP46597 345 aa18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 IRF3Q14653 427 aa18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 GRIN2CQ14957 1233 aa18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 TRIM60Q495X7 471 aa18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 MED27Q6P2C8 311 aa18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 CHTF18Q8WVB6 975 aa18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 TRMT61AQ96FX7 289 aaKnown RBP18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 TRMT2BQ96GJ1 504 aaKnown RBP18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 TXNDC15Q96J42 360 aa18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 WFDC6Q9BQY6 131 aa18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 LINC00597Q9H2U6 94 aa18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 REEP4Q9H6H4 257 aa18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 BTNL2Q9UIR0 455 aa18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 MYO10Q9HD67 2058 aa18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 PDZK1P1A8MUH7 402 aa18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 TAF4O00268 1085 aa18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 TEX28O15482 410 aa18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 TNFRSF21O75509 655 aa18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 POP4O95707 220 aaKnown RBP18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 FHP07954 510 aa18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 HOXB6P17509 224 aaKnown RBP18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 SOX6P35712 828 aa18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 LINC00299Q6ZSB3 139 aa18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 ZNF480Q8WV37 535 aa18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 C11orf24Q96F05 449 aaPredicted RBP18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 MCCC1Q96RQ3 725 aaPredicted RBP18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 SDHCQ99643 169 aaPredicted RBP18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 SLC25A13Q9UJS0 675 aa18.72■□□□□ 0.59
CNEP1R1-203ENST00000458059 A0A0G2JN53 185 aa18.71■□□□□ 0.59
CNEP1R1-203ENST00000458059 APOA1P02647 267 aa18.71■□□□□ 0.59
CNEP1R1-203ENST00000458059 STATHP02808 62 aa18.71■□□□□ 0.59
CNEP1R1-203ENST00000458059 SOD2P04179 222 aa18.71■□□□□ 0.59
CNEP1R1-203ENST00000458059 BCHEP06276 602 aa18.71■□□□□ 0.59
CNEP1R1-203ENST00000458059 IL3P08700 152 aa18.71■□□□□ 0.59
CNEP1R1-203ENST00000458059 TNFSF8P32971 234 aa18.71■□□□□ 0.59
CNEP1R1-203ENST00000458059 RPS19P39019 145 aaKnown RBP18.71■□□□□ 0.59
CNEP1R1-203ENST00000458059 HNF4AP41235 474 aa18.71■□□□□ 0.59
CNEP1R1-203ENST00000458059 METAP1P53582 386 aa18.71■□□□□ 0.59
CNEP1R1-203ENST00000458059 LSM11P83369 360 aaKnown RBP eCLIP18.71■□□□□ 0.59
CNEP1R1-203ENST00000458059 ZNF763Q0D2J5 394 aa18.71■□□□□ 0.59
CNEP1R1-203ENST00000458059 CDC20Q12834 499 aa18.71■□□□□ 0.59
CNEP1R1-203ENST00000458059 CDKL4Q5MAI5 379 aa18.71■□□□□ 0.59
CNEP1R1-203ENST00000458059 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.71■□□□□ 0.59
CNEP1R1-203ENST00000458059 DEPDC4Q8N2C3 294 aa18.71■□□□□ 0.59
CNEP1R1-203ENST00000458059 FCRL1Q96LA6 429 aa18.71■□□□□ 0.59
CNEP1R1-203ENST00000458059 MUTYHQ9UIF7 546 aa18.71■□□□□ 0.59
CNEP1R1-203ENST00000458059 ISPDA4D126 451 aa18.71■□□□□ 0.59
CNEP1R1-203ENST00000458059 ANKDD1BA6NHY2 528 aa18.71■□□□□ 0.59
CNEP1R1-203ENST00000458059 PLK4O00444 970 aa18.71■□□□□ 0.59
CNEP1R1-203ENST00000458059 KRT8P05787 483 aa18.71■□□□□ 0.59
CNEP1R1-203ENST00000458059 SLC15A1P46059 708 aa18.71■□□□□ 0.59
CNEP1R1-203ENST00000458059 OR2B6P58173 313 aa18.71■□□□□ 0.59
CNEP1R1-203ENST00000458059 SP140Q13342 867 aa18.71■□□□□ 0.59
CNEP1R1-203ENST00000458059 TRAPPC5Q8IUR0 188 aa18.71■□□□□ 0.59
CNEP1R1-203ENST00000458059 LAX1Q8IWV1 398 aa18.71■□□□□ 0.59
CNEP1R1-203ENST00000458059 OR2A12Q8NGT7 310 aa18.71■□□□□ 0.59
CNEP1R1-203ENST00000458059 ASPNQ9BXN1 380 aa18.71■□□□□ 0.59
CNEP1R1-203ENST00000458059 MIEF1Q9NQG6 463 aa18.71■□□□□ 0.59
CNEP1R1-203ENST00000458059 HCN4Q9Y3Q4 1203 aa18.71■□□□□ 0.59
CNEP1R1-203ENST00000458059 DNMT3AQ9Y6K1 912 aaPredicted RBP18.71■□□□□ 0.59
CNEP1R1-203ENST00000458059 H0YIV9 168 aa18.7■□□□□ 0.58
CNEP1R1-203ENST00000458059 HOXA2O43364 376 aa18.7■□□□□ 0.58
CNEP1R1-203ENST00000458059 DYRK3O43781 588 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms