RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 HAS2Q92819 552 aa8.14□□□□□ -1.11
RFX3-209ENST00000451859 GAL3ST3Q96A11 431 aa8.14□□□□□ -1.11
RFX3-209ENST00000451859 ZNF354BQ96LW1 612 aa8.14□□□□□ -1.11
RFX3-209ENST00000451859 SIGLEC12Q96PQ1 595 aa8.14□□□□□ -1.11
RFX3-209ENST00000451859 BARD1Q99728 777 aaKnown RBP8.14□□□□□ -1.11
RFX3-209ENST00000451859 NPAS2Q99743 824 aa8.14□□□□□ -1.11
RFX3-209ENST00000451859 SLX1AQ9BQ83 275 aa8.14□□□□□ -1.11
RFX3-209ENST00000451859 LRRC1Q9BTT6 524 aa8.14□□□□□ -1.11
RFX3-209ENST00000451859 CNOT10Q9H9A5 744 aaKnown RBP8.14□□□□□ -1.11
RFX3-209ENST00000451859 COPS7BQ9H9Q2 264 aaPredicted RBP8.14□□□□□ -1.11
RFX3-209ENST00000451859 MMP25Q9NPA2 562 aa8.14□□□□□ -1.11
RFX3-209ENST00000451859 NECTIN3Q9NQS3 549 aa8.14□□□□□ -1.11
RFX3-209ENST00000451859 ABI3Q9P2A4 366 aa8.14□□□□□ -1.11
RFX3-209ENST00000451859 SH3BGRL2Q9UJC5 107 aa8.14□□□□□ -1.11
RFX3-209ENST00000451859 NINQ8N4C6 2090 aa8.14□□□□□ -1.11
RFX3-209ENST00000451859 GABRR3A8MPY1 467 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 UBXN8O00124 270 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 PRAMEF4O60810 478 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 STK16O75716 305 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 UNC5CO95185 931 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 CLDN1O95832 211 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 DDAH2O95865 285 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 C1QAP02745 245 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 CYC1P08574 325 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 GSTA2P09210 222 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 SLC35E2BP0CK96 405 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 PCNAP12004 261 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 TFEBP19484 476 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 IL10P22301 178 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 CERS1P27544 350 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 PPP2R1BP30154 601 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 STXBP1P61764 594 aaKnown RBP8.13□□□□□ -1.11
RFX3-209ENST00000451859 IRF9Q00978 393 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 CKAP4Q07065 602 aaKnown RBP8.13□□□□□ -1.11
RFX3-209ENST00000451859 DLG1Q12959 904 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 SLC13A2Q13183 592 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 TUBA3CQ13748 450 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 RUNX2Q13950 521 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 DOC2AQ14183 400 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 OR1C1Q15619 314 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 ZKSCAN8Q15776 578 aaPredicted RBP8.13□□□□□ -1.11
RFX3-209ENST00000451859 MEP1AQ16819 746 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 ZNF766Q5HY98 468 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 GRTP1Q5TC63 336 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 PRAMEF9Q5VWM5 478 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 SULT1C3Q6IMI6 304 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 NIPAL1Q6NVV3 410 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 RPUSD3Q6P087 351 aaKnown RBP8.13□□□□□ -1.11
RFX3-209ENST00000451859 TUBA3EQ6PEY2 450 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 GFRALQ6UXV0 394 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 CLNKQ7Z7G1 428 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 TBC1D1Q86TI0 1168 aaPredicted RBP8.13□□□□□ -1.11
RFX3-209ENST00000451859 TCAIMQ8N3R3 496 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 SLC5A8Q8N695 610 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 M1APQ8TC57 530 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 THAP3Q8WTV1 239 aaPredicted RBP8.13□□□□□ -1.11
RFX3-209ENST00000451859 NR4A3Q92570 626 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 MS4A6EQ96DS6 147 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 CSF3RQ99062 836 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 UTP23Q9BRU9 249 aaKnown RBP8.13□□□□□ -1.11
RFX3-209ENST00000451859 KRTAP9-2Q9BYQ4 174 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 RNF32Q9H0A6 362 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 TSPAN10Q9H1Z9 355 aaPredicted RBP8.13□□□□□ -1.11
RFX3-209ENST00000451859 CDCP1Q9H5V8 836 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 PNO1Q9NRX1 252 aaKnown RBP8.13□□□□□ -1.11
RFX3-209ENST00000451859 ASB1Q9Y576 335 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 TEX15Q9BXT5 2789 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 EXPH5Q8NEV8 1989 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 NCKAP5O14513 1909 aa8.13□□□□□ -1.11
RFX3-209ENST00000451859 NCOA6Q14686 2063 aaPredicted RBP8.12□□□□□ -1.11
RFX3-209ENST00000451859 ITPR2Q14571 2701 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 TRGV8A0A0C4DH27 118 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 TRBV11-1A0A0K0K1C0 115 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 LRIT2A6NDA9 550 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 SAGE2PA6NJ88 616 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 RTCAO00442 366 aaKnown RBP8.12□□□□□ -1.11
RFX3-209ENST00000451859 B3GALT2O43825 422 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 ZG16O60844 167 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 MYO1DO94832 1006 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 CRYABP02511 175 aaKnown RBP8.12□□□□□ -1.11
RFX3-209ENST00000451859 SMIM10L1P0DMW3 83 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 MYBL2P10244 700 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 CD22P20273 847 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 MST1P26927 711 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 TPP2P29144 1249 aaPredicted RBP8.12□□□□□ -1.11
RFX3-209ENST00000451859 EEF1DP29692 281 aaKnown RBP8.12□□□□□ -1.11
RFX3-209ENST00000451859 CD96P40200 585 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 MSH2P43246 934 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 KCNC1P48547 511 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 TDGF1P3P51864 188 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 HNRNPFP52597 415 aaKnown RBP8.12□□□□□ -1.11
RFX3-209ENST00000451859 IRF8Q02556 426 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 GUCY2DQ02846 1103 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 ILF2Q12905 390 aaKnown RBP8.12□□□□□ -1.11
RFX3-209ENST00000451859 CHIT1Q13231 466 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 DDX39BQ13838 428 aaKnown RBP8.12□□□□□ -1.11
RFX3-209ENST00000451859 INAQ16352 499 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 UBAP2Q5T6F2 1119 aaKnown RBP8.12□□□□□ -1.11
RFX3-209ENST00000451859 MROH9Q5TGP6 573 aa8.12□□□□□ -1.11
RFX3-209ENST00000451859 ZNF468Q5VIY5 522 aaPredicted RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms