RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 NUP54Q7Z3B4 507 aa17.98■□□□□ 0.47
SHANK3-203ENST00000445220 OR2AJ1Q8NGZ0 328 aa17.98■□□□□ 0.47
SHANK3-203ENST00000445220 COQ10AQ96MF6 247 aa17.98■□□□□ 0.47
SHANK3-203ENST00000445220 PSKH2Q96QS6 385 aa17.98■□□□□ 0.47
SHANK3-203ENST00000445220 POPDC3Q9HBV1 291 aa17.98■□□□□ 0.47
SHANK3-203ENST00000445220 NEUROD4Q9HD90 331 aa17.98■□□□□ 0.47
SHANK3-203ENST00000445220 NUFIP1Q9UHK0 495 aaKnown RBP17.98■□□□□ 0.47
SHANK3-203ENST00000445220 FZD9O00144 591 aa17.97■□□□□ 0.47
SHANK3-203ENST00000445220 TGFB1P01137 390 aa17.97■□□□□ 0.47
SHANK3-203ENST00000445220 SYPL2Q5VXT5 272 aa17.97■□□□□ 0.47
SHANK3-203ENST00000445220 TSPYL5Q86VY4 417 aaPredicted RBP17.97■□□□□ 0.47
SHANK3-203ENST00000445220 OR7G2Q8NG99 324 aa17.97■□□□□ 0.47
SHANK3-203ENST00000445220 SLC22A17Q8WUG5 538 aa17.97■□□□□ 0.47
SHANK3-203ENST00000445220 ENPP5Q9UJA9 477 aa17.97■□□□□ 0.47
SHANK3-203ENST00000445220 ERVW-1Q9UQF0 538 aa17.97■□□□□ 0.47
SHANK3-203ENST00000445220 CPQQ9Y646 472 aa17.97■□□□□ 0.47
SHANK3-203ENST00000445220 COLEC10Q9Y6Z7 277 aa17.97■□□□□ 0.47
SHANK3-203ENST00000445220 BMP8BP34820 402 aa17.97■□□□□ 0.47
SHANK3-203ENST00000445220 BMP8AQ7Z5Y6 402 aa17.97■□□□□ 0.47
SHANK3-203ENST00000445220 GID4Q8IVV7 300 aa17.97■□□□□ 0.47
SHANK3-203ENST00000445220 CHDHQ8NE62 594 aaPredicted RBP17.97■□□□□ 0.47
SHANK3-203ENST00000445220 FBXO22Q8NEZ5 403 aa17.97■□□□□ 0.47
SHANK3-203ENST00000445220 OR4K3Q96R72 315 aa17.97■□□□□ 0.47
SHANK3-203ENST00000445220 REEP3Q6NUK4 255 aa17.97■□□□□ 0.47
SHANK3-203ENST00000445220 PQLC3Q8N755 202 aa17.97■□□□□ 0.47
SHANK3-203ENST00000445220 AP1S3Q96PC3 154 aa17.97■□□□□ 0.47
SHANK3-203ENST00000445220 YIPF4Q9BSR8 244 aa17.97■□□□□ 0.47
SHANK3-203ENST00000445220 NALCNQ8IZF0 1738 aa17.97■□□□□ 0.47
SHANK3-203ENST00000445220 WNT9AO14904 365 aa17.97■□□□□ 0.47
SHANK3-203ENST00000445220 HTR1AP08908 422 aa17.97■□□□□ 0.47
SHANK3-203ENST00000445220 VEGFBP49765 207 aa17.97■□□□□ 0.47
SHANK3-203ENST00000445220 PLEKHN1Q494U1 663 aaPredicted RBP17.97■□□□□ 0.47
SHANK3-203ENST00000445220 ZNF382Q96SR6 550 aa17.97■□□□□ 0.47
SHANK3-203ENST00000445220 PPA2Q9H2U2 334 aa17.97■□□□□ 0.47
SHANK3-203ENST00000445220 RHCGQ9UBD6 479 aa17.97■□□□□ 0.47
SHANK3-203ENST00000445220 TBC1D3DA0A087WVF3 549 aa17.96■□□□□ 0.47
SHANK3-203ENST00000445220 TBC1D3IA0A087WXS9 549 aa17.96■□□□□ 0.47
SHANK3-203ENST00000445220 TBC1D3EA0A087X179 549 aa17.96■□□□□ 0.47
SHANK3-203ENST00000445220 TBC1D3KA0A087X1G2 549 aa17.96■□□□□ 0.47
SHANK3-203ENST00000445220 TBC1D3FA6NER0 549 aaPredicted RBP17.96■□□□□ 0.47
SHANK3-203ENST00000445220 LRRC72A6NJI9 287 aa17.96■□□□□ 0.47
SHANK3-203ENST00000445220 TBC1D3LB9A6J9 549 aa17.96■□□□□ 0.47
SHANK3-203ENST00000445220 C9IYK1 514 aa17.96■□□□□ 0.47
SHANK3-203ENST00000445220 MRPS14O60783 128 aaKnown RBP17.96■□□□□ 0.47
SHANK3-203ENST00000445220 RFPL3O75679 317 aa17.96■□□□□ 0.47
SHANK3-203ENST00000445220 TBC1D3HP0C7X1 549 aa17.96■□□□□ 0.47
SHANK3-203ENST00000445220 PTPN2P17706 415 aa17.96■□□□□ 0.47
SHANK3-203ENST00000445220 GJA9P57773 515 aa17.96■□□□□ 0.47
SHANK3-203ENST00000445220 SNTA1Q13424 505 aa17.96■□□□□ 0.47
SHANK3-203ENST00000445220 KCNJ8Q15842 424 aa17.96■□□□□ 0.47
SHANK3-203ENST00000445220 SLC35G1Q2M3R5 365 aa17.96■□□□□ 0.47
SHANK3-203ENST00000445220 TBC1D3GQ6DHY5 549 aa17.96■□□□□ 0.47
SHANK3-203ENST00000445220 TBC1D3CQ6IPX1 549 aa17.96■□□□□ 0.47
SHANK3-203ENST00000445220 TBC1D3Q8IZP1 549 aaPredicted RBP17.96■□□□□ 0.47
SHANK3-203ENST00000445220 ADAP2Q9NPF8 381 aa17.96■□□□□ 0.47
SHANK3-203ENST00000445220 PIGVQ9NUD9 493 aa17.96■□□□□ 0.47
SHANK3-203ENST00000445220 VIRMAQ69YN4 1812 aaKnown RBP17.96■□□□□ 0.47
SHANK3-203ENST00000445220 PPIGQ13427 754 aaKnown RBP eCLIP17.96■□□□□ 0.476e-7■■□□□ 13.7
SHANK3-203ENST00000445220 GRHL2Q6ISB3 625 aa17.96■□□□□ 0.47
SHANK3-203ENST00000445220 BEST3Q8N1M1 668 aa17.96■□□□□ 0.47
SHANK3-203ENST00000445220 TTLQ8NG68 377 aa17.96■□□□□ 0.47
SHANK3-203ENST00000445220 GNPDA2Q8TDQ7 276 aa17.96■□□□□ 0.47
SHANK3-203ENST00000445220 NELL2Q99435 816 aa17.96■□□□□ 0.47
SHANK3-203ENST00000445220 POTEKPQ9BYX7 375 aa17.96■□□□□ 0.47
SHANK3-203ENST00000445220 ZDHHC3Q9NYG2 299 aa17.96■□□□□ 0.47
SHANK3-203ENST00000445220 SLC22A14Q9Y267 594 aa17.96■□□□□ 0.47
SHANK3-203ENST00000445220 A0A1B0GVI7 797 aa17.96■□□□□ 0.47
SHANK3-203ENST00000445220 IFNA2P01563 188 aa17.96■□□□□ 0.47
SHANK3-203ENST00000445220 CBSLP0DN79 551 aa17.96■□□□□ 0.47
SHANK3-203ENST00000445220 GTF2F2P13984 249 aa17.96■□□□□ 0.47
SHANK3-203ENST00000445220 CBSP35520 551 aa17.96■□□□□ 0.47
SHANK3-203ENST00000445220 CLCN7P51798 805 aa17.96■□□□□ 0.47
SHANK3-203ENST00000445220 GFOD2Q3B7J2 385 aa17.96■□□□□ 0.47
SHANK3-203ENST00000445220 SLC8B1Q6J4K2 584 aa17.96■□□□□ 0.47
SHANK3-203ENST00000445220 CYS1Q717R9 158 aa17.96■□□□□ 0.47
SHANK3-203ENST00000445220 ZC3H3Q8IXZ2 948 aaKnown RBP17.96■□□□□ 0.47
SHANK3-203ENST00000445220 DOHHQ9BU89 302 aa17.96■□□□□ 0.47
SHANK3-203ENST00000445220 SYT4Q9H2B2 425 aa17.96■□□□□ 0.47
SHANK3-203ENST00000445220 AIG1Q9NVV5 245 aa17.96■□□□□ 0.47
SHANK3-203ENST00000445220 NLGN3Q9NZ94 848 aa17.96■□□□□ 0.47
SHANK3-203ENST00000445220 TMEM5Q9Y2B1 443 aa17.96■□□□□ 0.47
SHANK3-203ENST00000445220 LYRM1O43325 122 aa17.96■□□□□ 0.46
SHANK3-203ENST00000445220 STC1P52823 247 aa17.96■□□□□ 0.46
SHANK3-203ENST00000445220 OR4D2P58180 307 aa17.96■□□□□ 0.46
SHANK3-203ENST00000445220 FXYD6P3P58550 94 aa17.96■□□□□ 0.46
SHANK3-203ENST00000445220 ZNF33AQ06730 810 aa17.96■□□□□ 0.46
SHANK3-203ENST00000445220 UBXN11Q5T124 520 aa17.96■□□□□ 0.46
SHANK3-203ENST00000445220 BLOC1S3Q6QNY0 202 aa17.96■□□□□ 0.46
SHANK3-203ENST00000445220 RAB11FIP2Q7L804 512 aa17.96■□□□□ 0.46
SHANK3-203ENST00000445220 SNAPC3Q92966 411 aa17.96■□□□□ 0.46
SHANK3-203ENST00000445220 TCEAL3Q969E4 200 aa17.96■□□□□ 0.46
SHANK3-203ENST00000445220 GON7Q9BXV9 100 aa17.96■□□□□ 0.46
SHANK3-203ENST00000445220 BIN3Q9NQY0 253 aa17.96■□□□□ 0.46
SHANK3-203ENST00000445220 TCHHQ07283 1943 aa17.95■□□□□ 0.46
SHANK3-203ENST00000445220 ZNF487B1APH4 448 aa17.95■□□□□ 0.46
SHANK3-203ENST00000445220 CCL16O15467 120 aa17.95■□□□□ 0.46
SHANK3-203ENST00000445220 TLX3O43711 291 aaPredicted RBP17.95■□□□□ 0.46
SHANK3-203ENST00000445220 FCER2P06734 321 aa17.95■□□□□ 0.46
SHANK3-203ENST00000445220 GRB7Q14451 532 aa17.95■□□□□ 0.46
SHANK3-203ENST00000445220 FAM182AQ5T1J6 154 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms