RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 CHD5Q8TDI0 1954 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 A0A0D9SEW6 157 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 FABP12A6NFH5 140 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 IQCF5A8MTL0 148 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 LOC730098B7Z3J9 87 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 SUV39H1O43463 412 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 KDELR3O43731 214 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 EPN2O95208 641 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 GUCA1CO95843 209 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 C1QCP02747 245 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 ZDHHC11BP0C7U3 371 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 CTRB1P17538 263 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 CRYBB2P43320 205 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 SNRPD2P62316 118 aaKnown RBP11.41□□□□□ -0.58
LTBR-203ENST00000441074 RPS24P62847 133 aaKnown RBP11.41□□□□□ -0.58
LTBR-203ENST00000441074 SMARCB1Q12824 385 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 DOC2BQ14184 412 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 VEPH1Q14D04 833 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 SUZ12Q15022 739 aaKnown RBP11.41□□□□□ -0.58
LTBR-203ENST00000441074 TATDN3Q17R31 274 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 TXNDC8Q6A555 127 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 CTRB2Q6GPI1 263 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 METTL2BQ6P1Q9 378 aaKnown RBP11.41□□□□□ -0.58
LTBR-203ENST00000441074 CHRDL2Q6WN34 429 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 GPR155Q7Z3F1 870 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 TMEM150AQ86TG1 271 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 SYNPOQ8N3V7 929 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 SDR16C5Q8N3Y7 309 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 ZNF557Q8N988 423 aaPredicted RBP11.41□□□□□ -0.58
LTBR-203ENST00000441074 NLGN4YQ8NFZ3 816 aaPredicted RBP11.41□□□□□ -0.58
LTBR-203ENST00000441074 HERVK_113Q902F9 699 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 ULK4Q96C45 1275 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 TSSK3Q96PN8 268 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 HDHD5Q9BXW7 423 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 ACPTQ9BZG2 426 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 RACGAP1Q9H0H5 632 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.41□□□□□ -0.58
LTBR-203ENST00000441074 MIXL1Q9H2W2 232 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 ABCB9Q9NP78 766 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 GLTPQ9NZD2 209 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 OARD1Q9Y530 152 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 ALG5Q9Y673 324 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 TRANK1O15050 2925 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 LINC00862A6NCI5 91 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 A8MVJ9 347 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 FPGTO14772 594 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 PROM1O43490 865 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 EFCAB14O75071 495 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 LGI1O95970 557 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 PRLP01236 227 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 CYP17A1P05093 508 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 URODP06132 367 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 LINC00271P0C7V0 271 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 PIPP12273 146 aaPredicted RBP11.41□□□□□ -0.58
LTBR-203ENST00000441074 IFI30P13284 250 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 NAGAP17050 411 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 PSMA1P25786 263 aaKnown RBP11.41□□□□□ -0.58
LTBR-203ENST00000441074 ATP5C1P36542 298 aaKnown RBP11.41□□□□□ -0.58
LTBR-203ENST00000441074 GDF5P43026 501 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 MAPK12P53778 367 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 CDH4P55283 916 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.41□□□□□ -0.58
LTBR-203ENST00000441074 SDE2Q6IQ49 451 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 TSEN54Q7Z6J9 526 aaKnown RBP11.41□□□□□ -0.58
LTBR-203ENST00000441074 DNAJB7Q7Z6W7 309 aaPredicted RBP11.41□□□□□ -0.58
LTBR-203ENST00000441074 OR4C15Q8NGM1 316 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 DNAJA4Q8WW22 397 aaPredicted RBP11.41□□□□□ -0.58
LTBR-203ENST00000441074 ZC3HAV1LQ96H79 300 aaKnown RBP11.41□□□□□ -0.58
LTBR-203ENST00000441074 MSLNLQ96KJ4 702 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 DPH2Q9BQC3 489 aaPredicted RBP11.41□□□□□ -0.58
LTBR-203ENST00000441074 P2RY12Q9H244 342 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 ZNF334Q9HCZ1 680 aaPredicted RBP11.41□□□□□ -0.58
LTBR-203ENST00000441074 RLIMQ9NVW2 624 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 AFF4Q9UHB7 1163 aaKnown RBP11.41□□□□□ -0.58
LTBR-203ENST00000441074 TSR3Q9UJK0 312 aaKnown RBP11.41□□□□□ -0.58
LTBR-203ENST00000441074 STUB1Q9UNE7 303 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 HSPB11Q9Y547 144 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 BACE2Q9Y5Z0 518 aa11.41□□□□□ -0.58
LTBR-203ENST00000441074 HIDE1A8MVS5 230 aa11.4□□□□□ -0.58
LTBR-203ENST00000441074 TGM5O43548 720 aa11.4□□□□□ -0.58
LTBR-203ENST00000441074 MPZL2O60487 215 aa11.4□□□□□ -0.58
LTBR-203ENST00000441074 PDGFAP04085 211 aa11.4□□□□□ -0.58
LTBR-203ENST00000441074 FHP07954 510 aa11.4□□□□□ -0.58
LTBR-203ENST00000441074 TACR1P25103 407 aa11.4□□□□□ -0.58
LTBR-203ENST00000441074 MAPK1P28482 360 aa11.4□□□□□ -0.58
LTBR-203ENST00000441074 GPC1P35052 558 aa11.4□□□□□ -0.58
LTBR-203ENST00000441074 PTGS2P35354 604 aa11.4□□□□□ -0.58
LTBR-203ENST00000441074 KIR3DL1P43629 444 aa11.4□□□□□ -0.58
LTBR-203ENST00000441074 RGS4P49798 205 aa11.4□□□□□ -0.58
LTBR-203ENST00000441074 CDC42P60953 191 aa11.4□□□□□ -0.58
LTBR-203ENST00000441074 MTAPQ13126 283 aa11.4□□□□□ -0.58
LTBR-203ENST00000441074 MICAQ29983 383 aa11.4□□□□□ -0.58
LTBR-203ENST00000441074 HKDC1Q2TB90 917 aa11.4□□□□□ -0.58
LTBR-203ENST00000441074 LCN1P1Q5VSP4 162 aa11.4□□□□□ -0.58
LTBR-203ENST00000441074 CERS6Q6ZMG9 384 aa11.4□□□□□ -0.58
LTBR-203ENST00000441074 CAMKK1Q8N5S9 505 aa11.4□□□□□ -0.58
LTBR-203ENST00000441074 OR7D4Q8NG98 312 aa11.4□□□□□ -0.58
LTBR-203ENST00000441074 LRRC20Q8TCA0 184 aa11.4□□□□□ -0.58
LTBR-203ENST00000441074 UBTD2Q8WUN7 234 aa11.4□□□□□ -0.58
LTBR-203ENST00000441074 MTFMTQ96DP5 389 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms