RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 TCAIMQ8N3R3 496 aa15.95■□□□□ 0.14
TRIM39-209ENST00000428728 APCDD1LQ8NCL9 501 aa15.95■□□□□ 0.14
TRIM39-209ENST00000428728 BBOF1Q8ND07 529 aa15.95■□□□□ 0.14
TRIM39-209ENST00000428728 TMEM52Q8NDY8 209 aa15.95■□□□□ 0.14
TRIM39-209ENST00000428728 SREK1Q8WXA9 508 aaKnown RBP15.95■□□□□ 0.14
TRIM39-209ENST00000428728 CDKL2Q92772 493 aa15.95■□□□□ 0.14
TRIM39-209ENST00000428728 RBBP8Q99708 897 aa15.95■□□□□ 0.14
TRIM39-209ENST00000428728 CNOT10Q9H9A5 744 aaKnown RBP15.95■□□□□ 0.14
TRIM39-209ENST00000428728 COPS7BQ9H9Q2 264 aaPredicted RBP15.95■□□□□ 0.14
TRIM39-209ENST00000428728 PRM3Q9NNZ6 103 aa15.95■□□□□ 0.14
TRIM39-209ENST00000428728 GPRC5BQ9NZH0 403 aa15.95■□□□□ 0.14
TRIM39-209ENST00000428728 CD274Q9NZQ7 290 aa15.95■□□□□ 0.14
TRIM39-209ENST00000428728 ZNF835Q9Y2P0 537 aa15.95■□□□□ 0.14
TRIM39-209ENST00000428728 A0A088AWK7 358 aa15.94■□□□□ 0.14
TRIM39-209ENST00000428728 TCRBV9S1A1TA0A576 114 aa15.94■□□□□ 0.14
TRIM39-209ENST00000428728 PRAMEF4O60810 478 aa15.94■□□□□ 0.14
TRIM39-209ENST00000428728 CLEC3AO75596 197 aa15.94■□□□□ 0.14
TRIM39-209ENST00000428728 CD1DP15813 335 aa15.94■□□□□ 0.14
TRIM39-209ENST00000428728 STMN1P16949 149 aa15.94■□□□□ 0.14
TRIM39-209ENST00000428728 ZNF10P21506 573 aaPredicted RBP15.94■□□□□ 0.14
TRIM39-209ENST00000428728 GSTM2P28161 218 aa15.94■□□□□ 0.14
TRIM39-209ENST00000428728 GMPRP36959 345 aa15.94■□□□□ 0.14
TRIM39-209ENST00000428728 MEOX1P50221 254 aa15.94■□□□□ 0.14
TRIM39-209ENST00000428728 C2orf54Q08AI8 447 aa15.94■□□□□ 0.14
TRIM39-209ENST00000428728 XKR6Q5GH73 641 aa15.94■□□□□ 0.14
TRIM39-209ENST00000428728 PRAMEF9Q5VWM5 478 aa15.94■□□□□ 0.14
TRIM39-209ENST00000428728 C3P1Q6ZMU1 363 aa15.94■□□□□ 0.14
TRIM39-209ENST00000428728 Q6ZPB1 254 aaPredicted RBP15.94■□□□□ 0.14
TRIM39-209ENST00000428728 VN1R5Q7Z5H4 357 aa15.94■□□□□ 0.14
TRIM39-209ENST00000428728 CYP4Z2PQ8N1L4 340 aa15.94■□□□□ 0.14
TRIM39-209ENST00000428728 OR2L5Q8NG80 312 aa15.94■□□□□ 0.14
TRIM39-209ENST00000428728 NCLNQ969V3 563 aa15.94■□□□□ 0.14
TRIM39-209ENST00000428728 QRFPRQ96P65 431 aa15.94■□□□□ 0.14
TRIM39-209ENST00000428728 CSF3RQ99062 836 aa15.94■□□□□ 0.14
TRIM39-209ENST00000428728 GPR22Q99680 433 aa15.94■□□□□ 0.14
TRIM39-209ENST00000428728 CPNE1Q99829 537 aa15.94■□□□□ 0.14
TRIM39-209ENST00000428728 NPLQ9BXD5 320 aaPredicted RBP15.94■□□□□ 0.14
TRIM39-209ENST00000428728 CAPS2Q9BXY5 557 aa15.94■□□□□ 0.14
TRIM39-209ENST00000428728 REXO4Q9GZR2 422 aaKnown RBP15.94■□□□□ 0.14
TRIM39-209ENST00000428728 ZNF223Q9UK11 482 aaPredicted RBP15.94■□□□□ 0.14
TRIM39-209ENST00000428728 MRPS33Q9Y291 106 aaKnown RBP15.94■□□□□ 0.14
TRIM39-209ENST00000428728 KLF13Q9Y2Y9 288 aaPredicted RBP15.94■□□□□ 0.14
TRIM39-209ENST00000428728 ZNF407Q9C0G0 2248 aa15.93■□□□□ 0.14
TRIM39-209ENST00000428728 MYOCOSA0A1B0GUC4 107 aa15.93■□□□□ 0.14
TRIM39-209ENST00000428728 CLDN4O14493 209 aa15.93■□□□□ 0.14
TRIM39-209ENST00000428728 TFECO14948 347 aaPredicted RBP15.93■□□□□ 0.14
TRIM39-209ENST00000428728 RAD51CO43502 376 aa15.93■□□□□ 0.14
TRIM39-209ENST00000428728 CCNT2O60583 730 aaKnown RBP15.93■□□□□ 0.14
TRIM39-209ENST00000428728 ITGA10O75578 1167 aa15.93■□□□□ 0.14
TRIM39-209ENST00000428728 TBX6O95947 436 aaPredicted RBP15.93■□□□□ 0.14
TRIM39-209ENST00000428728 S100BP04271 92 aaPredicted RBP15.93■□□□□ 0.14
TRIM39-209ENST00000428728 TRHRP34981 398 aaPredicted RBP15.93■□□□□ 0.14
TRIM39-209ENST00000428728 PTGER1P34995 402 aa15.93■□□□□ 0.14
TRIM39-209ENST00000428728 GP5P40197 560 aa15.93■□□□□ 0.14
TRIM39-209ENST00000428728 SMSP52788 366 aa15.93■□□□□ 0.14
TRIM39-209ENST00000428728 TERF2Q15554 542 aa15.93■□□□□ 0.14
TRIM39-209ENST00000428728 PDK4Q16654 411 aa15.93■□□□□ 0.14
TRIM39-209ENST00000428728 ZNF630Q2M218 657 aaPredicted RBP15.93■□□□□ 0.14
TRIM39-209ENST00000428728 SULT1C3Q6IMI6 304 aa15.93■□□□□ 0.14
TRIM39-209ENST00000428728 XKRXQ6PP77 449 aa15.93■□□□□ 0.14
TRIM39-209ENST00000428728 CTAGE3PQ8IX95 158 aa15.93■□□□□ 0.14
TRIM39-209ENST00000428728 TMEM156Q8N614 296 aa15.93■□□□□ 0.14
TRIM39-209ENST00000428728 AGAP11Q8TF27 550 aa15.93■□□□□ 0.14
TRIM39-209ENST00000428728 VMP1Q96GC9 406 aa15.93■□□□□ 0.14
TRIM39-209ENST00000428728 CCDC77Q9BR77 488 aa15.93■□□□□ 0.14
TRIM39-209ENST00000428728 ERP44Q9BS26 406 aa15.93■□□□□ 0.14
TRIM39-209ENST00000428728 RUBCNLQ9H714 662 aa15.93■□□□□ 0.14
TRIM39-209ENST00000428728 NT5DC2Q9H857 520 aa15.93■□□□□ 0.14
TRIM39-209ENST00000428728 TRIM45Q9H8W5 580 aaPredicted RBP15.93■□□□□ 0.14
TRIM39-209ENST00000428728 ADAP2Q9NPF8 381 aa15.93■□□□□ 0.14
TRIM39-209ENST00000428728 WHRNQ9P202 907 aa15.93■□□□□ 0.14
TRIM39-209ENST00000428728 RNF14Q9UBS8 474 aa15.93■□□□□ 0.14
TRIM39-209ENST00000428728 RNF112Q9ULX5 631 aa15.93■□□□□ 0.14
TRIM39-209ENST00000428728 MEMO1Q9Y316 297 aa15.93■□□□□ 0.14
TRIM39-209ENST00000428728 CLDN16Q9Y5I7 305 aa15.93■□□□□ 0.14
TRIM39-209ENST00000428728 FAM187AA6NFU0 413 aa15.92■□□□□ 0.14
TRIM39-209ENST00000428728 FAM159BA6NKW6 160 aa15.92■□□□□ 0.14
TRIM39-209ENST00000428728 CDK2AP1O14519 115 aa15.92■□□□□ 0.14
TRIM39-209ENST00000428728 EIF3HO15372 352 aaKnown RBP eCLIP15.92■□□□□ 0.14
TRIM39-209ENST00000428728 PRKNO60260 465 aaPredicted RBP15.92■□□□□ 0.14
TRIM39-209ENST00000428728 STK16O75716 305 aa15.92■□□□□ 0.14
TRIM39-209ENST00000428728 COX6B1P14854 86 aa15.92■□□□□ 0.14
TRIM39-209ENST00000428728 CD22P20273 847 aa15.92■□□□□ 0.14
TRIM39-209ENST00000428728 HPDP32754 393 aaPredicted RBP15.92■□□□□ 0.14
TRIM39-209ENST00000428728 MTTPP55157 894 aa15.92■□□□□ 0.14
TRIM39-209ENST00000428728 LIM2P55344 173 aa15.92■□□□□ 0.14
TRIM39-209ENST00000428728 HSD17B7P56937 341 aa15.92■□□□□ 0.14
TRIM39-209ENST00000428728 GPR85P60893 370 aa15.92■□□□□ 0.14
TRIM39-209ENST00000428728 ATP6V0D1P61421 351 aa15.92■□□□□ 0.14
TRIM39-209ENST00000428728 ILF2Q12905 390 aaKnown RBP15.92■□□□□ 0.14
TRIM39-209ENST00000428728 DOC2AQ14183 400 aa15.92■□□□□ 0.14
TRIM39-209ENST00000428728 CDSNQ15517 529 aa15.92■□□□□ 0.14
TRIM39-209ENST00000428728 ADPRMQ3LIE5 342 aa15.92■□□□□ 0.14
TRIM39-209ENST00000428728 CCDC25Q86WR0 208 aa15.92■□□□□ 0.14
TRIM39-209ENST00000428728 SULF2Q8IWU5 870 aa15.92■□□□□ 0.14
TRIM39-209ENST00000428728 CHERPQ8IWX8 916 aaKnown RBP15.92■□□□□ 0.14
TRIM39-209ENST00000428728 ARMC10Q8N2F6 343 aa15.92■□□□□ 0.14
TRIM39-209ENST00000428728 PDPRQ8NCN5 879 aa15.92■□□□□ 0.14
TRIM39-209ENST00000428728 ADAMTS18Q8TE60 1221 aa15.92■□□□□ 0.14
TRIM39-209ENST00000428728 PTCD3Q96EY7 689 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms