RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 GPATCH2LQ9NWQ4 482 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 ALKBH4Q9NXW9 302 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 NCKIPSDQ9NZQ3 722 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 FZD10Q9ULW2 581 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 PCDHGB4Q9UN71 923 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 POMPQ9Y244 141 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 SNX8Q9Y5X2 465 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 GMEB1Q9Y692 573 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 NUP205Q92621 2012 aa4.85□□□□□ -1.63
LINC00458-202ENST00000427299 ZNF106Q9H2Y7 1883 aaKnown RBP4.84□□□□□ -1.63
LINC00458-202ENST00000427299 A0A096LPK6 155 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 C17orf113A0A1B0GUU1 675 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 PABPN1LA6NDY0 278 aaKnown RBP4.84□□□□□ -1.63
LINC00458-202ENST00000427299 TMEM247A6NEH6 219 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 BBIP1A8MTZ0 92 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 PAPSS1O43252 624 aaPredicted RBP4.84□□□□□ -1.63
LINC00458-202ENST00000427299 B4GALT5O43286 388 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 GRID2O43424 1007 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 DCXO43602 365 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 TSPAN1O60635 241 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 AVILO75366 819 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 GRAP2O75791 330 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 NEURL1O76050 574 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 ZNF432O94892 652 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 PGM3O95394 542 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 CLPTM1O96005 669 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 PENKP01210 267 aaPredicted RBP4.84□□□□□ -1.63
LINC00458-202ENST00000427299 LGALS2P05162 132 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 FCGR2AP12318 317 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 HOXB8P17481 243 aaPredicted RBP4.84□□□□□ -1.63
LINC00458-202ENST00000427299 ARF4P18085 180 aaPredicted RBP4.84□□□□□ -1.63
LINC00458-202ENST00000427299 PIK3R1P27986 724 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 RPL5P46777 297 aaKnown RBP4.84□□□□□ -1.63
LINC00458-202ENST00000427299 NPY2RP49146 381 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 RGS7P49802 495 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 TAF6P49848 677 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 AQP4P55087 323 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 CDH8P55286 799 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 STX1BP61266 288 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 NAA20P61599 178 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 MC1RQ01726 317 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 GBE1Q04446 702 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 CRYZQ08257 329 aaKnown RBP4.84□□□□□ -1.63
LINC00458-202ENST00000427299 PPIDQ08752 370 aaKnown RBP4.84□□□□□ -1.63
LINC00458-202ENST00000427299 CDH17Q12864 832 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 ART3Q13508 389 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 TDGQ13569 410 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 CYLC2Q14093 348 aaPredicted RBP4.84□□□□□ -1.63
LINC00458-202ENST00000427299 SQLEQ14534 574 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 PDK3Q15120 406 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 CNPY1Q3B7I2 92 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 HSDL1Q3SXM5 330 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 FBXO43Q4G163 708 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 ARL13AQ5H913 290 aaPredicted RBP4.84□□□□□ -1.63
LINC00458-202ENST00000427299 TRNP1Q6NT89 227 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 PRMT9Q6P2P2 845 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 SLC22A25Q6T423 547 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 EPGNQ6UW88 154 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 PARM1Q6UWI2 310 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 ZYG11AQ6WRX3 759 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 SZRD1Q7Z422 152 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 C10orf107Q8IVU9 208 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 FBXO16Q8IX29 292 aaPredicted RBP4.84□□□□□ -1.63
LINC00458-202ENST00000427299 ADGRF2Q8IZF7 708 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 SCAIQ8N9R8 606 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 DNAAF3Q8N9W5 541 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 APPL2Q8NEU8 664 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 UBA3Q8TBC4 463 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 SLC35F5Q8WV83 523 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 PYDC1Q8WXC3 89 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 CNOT9Q92600 299 aaKnown RBP4.84□□□□□ -1.63
LINC00458-202ENST00000427299 FAM149B1Q96BN6 582 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 PPP1R14BQ96C90 147 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 ASB9Q96DX5 294 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 FAM120BQ96EK7 910 aaKnown RBP4.84□□□□□ -1.63
LINC00458-202ENST00000427299 PIWIL1Q96J94 861 aaKnown RBP4.84□□□□□ -1.63
LINC00458-202ENST00000427299 VPS39Q96JC1 886 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 SORT1Q99523 831 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 GPR22Q99680 433 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 EBF4Q9BQW3 602 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 SEZ6LQ9BYH1 1024 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.84□□□□□ -1.63
LINC00458-202ENST00000427299 MUC13Q9H3R2 512 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 RHOJQ9H4E5 214 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 C6orf106Q9H6K1 298 aaPredicted RBP4.84□□□□□ -1.63
LINC00458-202ENST00000427299 C10orf88Q9H8K7 445 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 ZNF556Q9HAH1 456 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 NMRAL1Q9HBL8 299 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 EML4Q9HC35 981 aaKnown RBP4.84□□□□□ -1.63
LINC00458-202ENST00000427299 TRPC7Q9HCX4 862 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 FAM49BQ9NUQ9 324 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 UTP6Q9NYH9 597 aaKnown RBP4.84□□□□□ -1.63
LINC00458-202ENST00000427299 SEPT10Q9P0V9 454 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 ATXN10Q9UBB4 475 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 ERRFI1Q9UJM3 462 aaPredicted RBP4.84□□□□□ -1.63
LINC00458-202ENST00000427299 RPS6KA6Q9UK32 745 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 EMCNQ9ULC0 261 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 ICAM5Q9UMF0 924 aa4.84□□□□□ -1.63
LINC00458-202ENST00000427299 AAR2Q9Y312 384 aaKnown RBP4.84□□□□□ -1.63
LINC00458-202ENST00000427299 SNX9Q9Y5X1 595 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms