RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 K7ESM1 405 aa12.82□□□□□ -0.36
USP42-203ENST00000426246 LEFTY2O00292 366 aa12.82□□□□□ -0.36
USP42-203ENST00000426246 C9P02748 559 aa12.82□□□□□ -0.36
USP42-203ENST00000426246 TYRP14679 529 aa12.82□□□□□ -0.36
USP42-203ENST00000426246 TARDBPQ13148 414 aaKnown RBP eCLIP12.82□□□□□ -0.364e-6■■□□□ 11.5
USP42-203ENST00000426246 SLC5A12Q1EHB4 618 aa12.82□□□□□ -0.36
USP42-203ENST00000426246 PAQR6Q6TCH4 344 aa12.82□□□□□ -0.36
USP42-203ENST00000426246 CEACAM20Q6UY09 585 aa12.82□□□□□ -0.36
USP42-203ENST00000426246 CPXM2Q8N436 756 aa12.82□□□□□ -0.36
USP42-203ENST00000426246 ATL1Q8WXF7 558 aa12.82□□□□□ -0.36
USP42-203ENST00000426246 COL21A1Q96P44 957 aa12.82□□□□□ -0.36
USP42-203ENST00000426246 TBC1D14Q9P2M4 693 aa12.82□□□□□ -0.36
USP42-203ENST00000426246 CARD8Q9Y2G2 431 aa12.82□□□□□ -0.36
USP42-203ENST00000426246 TNRC18O15417 2968 aaPredicted RBP12.82□□□□□ -0.36
USP42-203ENST00000426246 GRXCR1A8MXD5 290 aa12.82□□□□□ -0.36
USP42-203ENST00000426246 SLC22A1O15245 554 aa12.82□□□□□ -0.36
USP42-203ENST00000426246 SGTAO43765 313 aa12.82□□□□□ -0.36
USP42-203ENST00000426246 KIAA0513O60268 411 aa12.82□□□□□ -0.36
USP42-203ENST00000426246 PSMB5P28074 263 aa12.82□□□□□ -0.36
USP42-203ENST00000426246 CNR2P34972 360 aa12.82□□□□□ -0.36
USP42-203ENST00000426246 RUNX1T1Q06455 604 aa12.82□□□□□ -0.36
USP42-203ENST00000426246 GBX1Q14549 363 aa12.82□□□□□ -0.36
USP42-203ENST00000426246 STEAP3Q658P3 488 aa12.82□□□□□ -0.36
USP42-203ENST00000426246 TTC23LQ6PF05 361 aa12.82□□□□□ -0.36
USP42-203ENST00000426246 SHQ1Q6PI26 577 aaKnown RBP12.82□□□□□ -0.36
USP42-203ENST00000426246 CCBE1Q6UXH8 406 aaPredicted RBP12.82□□□□□ -0.36
USP42-203ENST00000426246 NANOGNBQ7Z5D8 188 aa12.82□□□□□ -0.36
USP42-203ENST00000426246 ANKRD13BQ86YJ7 626 aa12.82□□□□□ -0.36
USP42-203ENST00000426246 ZZZ3Q8IYH5 903 aa12.82□□□□□ -0.36
USP42-203ENST00000426246 CSGALNACT1Q8TDX6 532 aa12.82□□□□□ -0.36
USP42-203ENST00000426246 SH2B3Q9UQQ2 575 aa12.82□□□□□ -0.36
USP42-203ENST00000426246 SNX11Q9Y5W9 270 aa12.82□□□□□ -0.36
USP42-203ENST00000426246 C2orf16Q68DN1 1984 aa12.82□□□□□ -0.36
USP42-203ENST00000426246 TRAV19A0A0A6YYK7 116 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 PPM1DO15297 605 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 TLX2O43763 284 aaPredicted RBP12.81□□□□□ -0.36
USP42-203ENST00000426246 SLC28A2O43868 658 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 CPNE6O95741 557 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 IL3P08700 152 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 GRK5P34947 590 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 SPINT3P49223 89 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 ST8SIA6P61647 398 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 CDK6Q00534 326 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 NFE2L1Q14494 772 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 KCNJ8Q15842 424 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 ZNF385BQ569K4 471 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 C9orf50Q5SZB4 431 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 GALNT7Q86SF2 657 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 OR5D16Q8NGK9 328 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 CMTM7Q96FZ5 175 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 F2RL3Q96RI0 385 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 TTYH2Q9BSA4 534 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 RHBGQ9H310 441 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 TRPS1Q9UHF7 1281 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 CLEC2DQ9UHP7 191 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 SCN8AQ9UQD0 1980 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 A0A1W2PRB8 838 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 H7BY64 318 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 KRT75O95678 551 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 EPCAMP16422 314 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 ELP6Q0PNE2 266 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 MAP4K2Q12851 820 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 TMEM115Q12893 351 aaPredicted RBP12.81□□□□□ -0.36
USP42-203ENST00000426246 PIN1Q13526 163 aaPredicted RBP12.81□□□□□ -0.36
USP42-203ENST00000426246 TEAD2Q15562 447 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 CASP12Q6UXS9 341 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 GDPD4Q6W3E5 623 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 CCDC71Q8IV32 467 aaPredicted RBP12.81□□□□□ -0.36
USP42-203ENST00000426246 PAPD5Q8NDF8 572 aaKnown RBP12.81□□□□□ -0.36
USP42-203ENST00000426246 CHPT1Q8WUD6 406 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 SCRN2Q96FV2 425 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 PRAP1Q96NZ9 151 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 TRIT1Q9H3H1 467 aaKnown RBP12.81□□□□□ -0.36
USP42-203ENST00000426246 ASAH2Q9NR71 780 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 COMMD3Q9UBI1 195 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 RUVBL1Q9Y265 456 aaKnown RBP12.81□□□□□ -0.36
USP42-203ENST00000426246 CCL27Q9Y4X3 112 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 PCDHGB3Q9Y5G1 929 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 NUP210Q8TEM1 1887 aaPredicted RBP12.81□□□□□ -0.36
USP42-203ENST00000426246 AP3D1O14617 1153 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 WNT9AO14904 365 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 KLK8O60259 260 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 TMCC2O75069 709 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 C1SP09871 688 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 CD40LGP29965 261 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 TBPL1P62380 186 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 LSM11P83369 360 aaKnown RBP eCLIP12.81□□□□□ -0.36
USP42-203ENST00000426246 KIAA0040Q15053 153 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 RGNQ15493 299 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 HIST2H2ACQ16777 129 aaPredicted RBP12.81□□□□□ -0.36
USP42-203ENST00000426246 CCDC92Q53HC0 331 aaPredicted RBP12.81□□□□□ -0.36
USP42-203ENST00000426246 HIST2H2AA3Q6FI13 130 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 BRAT1Q6PJG6 821 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 PLEKHG7Q6ZR37 379 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 YTHDF1Q9BYJ9 559 aaKnown RBP12.81□□□□□ -0.36
USP42-203ENST00000426246 EHD1Q9H4M9 534 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 TAC3Q9UHF0 121 aa12.81□□□□□ -0.36
USP42-203ENST00000426246 NPPAP01160 153 aa12.8□□□□□ -0.36
USP42-203ENST00000426246 PSMA3P25788 255 aa12.8□□□□□ -0.36
USP42-203ENST00000426246 CDC42P60953 191 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms