RNA–Protein interactions for RNA: ENST00000421922.6

CCDC28B-202, Transcript of coiled-coil domain containing 28B, humanhuman

TSL 1 (best) BASIC

Gene CCDC28B, Length 1,415 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-202ENST00000421922 GRM7Q14831 915 aa16.27■□□□□ 0.19
CCDC28B-202ENST00000421922 MAPKAPK3Q16644 382 aa16.27■□□□□ 0.19
CCDC28B-202ENST00000421922 DEFB134Q4QY38 66 aa16.27■□□□□ 0.19
CCDC28B-202ENST00000421922 PHF19Q5T6S3 580 aa16.27■□□□□ 0.19
CCDC28B-202ENST00000421922 FAM71E1Q6IPT2 247 aa16.27■□□□□ 0.19
CCDC28B-202ENST00000421922 RIPOR1Q6ZS17 1223 aa16.27■□□□□ 0.19
CCDC28B-202ENST00000421922 MSANTD1Q6ZTZ1 278 aa16.27■□□□□ 0.19
CCDC28B-202ENST00000421922 D2HGDHQ8N465 521 aa16.27■□□□□ 0.19
CCDC28B-202ENST00000421922 VPS37AQ8NEZ2 397 aa16.27■□□□□ 0.19
CCDC28B-202ENST00000421922 ROPN1LQ96C74 230 aa16.27■□□□□ 0.19
CCDC28B-202ENST00000421922 SLC7A6OSQ96CW6 309 aaPredicted RBP16.27■□□□□ 0.19
CCDC28B-202ENST00000421922 MTERF3Q96E29 417 aa16.27■□□□□ 0.19
CCDC28B-202ENST00000421922 SLC41A2Q96JW4 573 aa16.27■□□□□ 0.19
CCDC28B-202ENST00000421922 CCDC74BQ96LY2 380 aa16.27■□□□□ 0.19
CCDC28B-202ENST00000421922 TMEM74Q96NL1 305 aa16.27■□□□□ 0.19
CCDC28B-202ENST00000421922 CDC6Q99741 560 aa16.27■□□□□ 0.19
CCDC28B-202ENST00000421922 AICDAQ9GZX7 198 aa16.27■□□□□ 0.19
CCDC28B-202ENST00000421922 LHX9Q9NQ69 397 aa16.27■□□□□ 0.19
CCDC28B-202ENST00000421922 PRDM7Q9NQW5 492 aa16.27■□□□□ 0.19
CCDC28B-202ENST00000421922 SEMA5BQ9P283 1151 aa16.27■□□□□ 0.19
CCDC28B-202ENST00000421922 PHF11Q9UIL8 331 aa16.27■□□□□ 0.19
CCDC28B-202ENST00000421922 SCN3AQ9NY46 2000 aa16.26■□□□□ 0.19
CCDC28B-202ENST00000421922 CFAP73A6NFT4 308 aa16.26■□□□□ 0.19
CCDC28B-202ENST00000421922 C4orf47A7E2U8 309 aa16.26■□□□□ 0.19
CCDC28B-202ENST00000421922 TMPRSS11DO60235 418 aa16.26■□□□□ 0.19
CCDC28B-202ENST00000421922 OR2B3O76000 313 aa16.26■□□□□ 0.19
CCDC28B-202ENST00000421922 ANKRD34CP0C6C1 535 aa16.26■□□□□ 0.19
CCDC28B-202ENST00000421922 CD59P13987 128 aa16.26■□□□□ 0.19
CCDC28B-202ENST00000421922 CD1EP15812 388 aa16.26■□□□□ 0.19
CCDC28B-202ENST00000421922 SLC25A3Q00325 362 aa16.26■□□□□ 0.19
CCDC28B-202ENST00000421922 ACY1Q03154 408 aa16.26■□□□□ 0.19
CCDC28B-202ENST00000421922 DMTNQ08495 405 aa16.26■□□□□ 0.19
CCDC28B-202ENST00000421922 KCNAB1Q14722 419 aa16.26■□□□□ 0.19
CCDC28B-202ENST00000421922 C6orf10Q5SRN2 563 aa16.26■□□□□ 0.19
CCDC28B-202ENST00000421922 ANXA8L1Q5VT79 327 aa16.26■□□□□ 0.19
CCDC28B-202ENST00000421922 TMEM214Q6NUQ4 689 aaKnown RBP16.26■□□□□ 0.19
CCDC28B-202ENST00000421922 ZNF793Q6ZN11 406 aa16.26■□□□□ 0.19
CCDC28B-202ENST00000421922 ERMP1Q7Z2K6 904 aa16.26■□□□□ 0.19
CCDC28B-202ENST00000421922 RIMKLAQ8IXN7 391 aa16.26■□□□□ 0.19
CCDC28B-202ENST00000421922 KIF2BQ8N4N8 673 aa16.26■□□□□ 0.19
CCDC28B-202ENST00000421922 OR7A2PQ8NGA2 310 aa16.26■□□□□ 0.19
CCDC28B-202ENST00000421922 KLHL6Q8WZ60 621 aa16.26■□□□□ 0.19
CCDC28B-202ENST00000421922 ITCHQ96J02 903 aa16.26■□□□□ 0.19
CCDC28B-202ENST00000421922 DUSP26Q9BV47 211 aa16.26■□□□□ 0.19
CCDC28B-202ENST00000421922 WDR41Q9HAD4 459 aa16.26■□□□□ 0.19
CCDC28B-202ENST00000421922 FAM120CQ9NX05 1096 aaKnown RBP16.26■□□□□ 0.19
CCDC28B-202ENST00000421922 TAS2R1Q9NYW7 299 aa16.26■□□□□ 0.19
CCDC28B-202ENST00000421922 FBXW2Q9UKT8 454 aa16.26■□□□□ 0.19
CCDC28B-202ENST00000421922 CLCA2Q9UQC9 943 aa16.26■□□□□ 0.19
CCDC28B-202ENST00000421922 SLC22A7Q9Y694 548 aa16.26■□□□□ 0.19
CCDC28B-202ENST00000421922 C4orf51C9J302 202 aa16.25■□□□□ 0.19
CCDC28B-202ENST00000421922 D6RAR5 112 aa16.25■□□□□ 0.19
CCDC28B-202ENST00000421922 ANKRD65E5RJM6 399 aa16.25■□□□□ 0.19
CCDC28B-202ENST00000421922 FBP2O00757 339 aa16.25■□□□□ 0.19
CCDC28B-202ENST00000421922 DNAJC8O75937 253 aaPredicted RBP16.25■□□□□ 0.19
CCDC28B-202ENST00000421922 SCELO95171 688 aa16.25■□□□□ 0.19
CCDC28B-202ENST00000421922 KCNH1O95259 989 aa16.25■□□□□ 0.19
CCDC28B-202ENST00000421922 DRD2P14416 443 aa16.25■□□□□ 0.19
CCDC28B-202ENST00000421922 IL1RNP18510 177 aa16.25■□□□□ 0.19
CCDC28B-202ENST00000421922 ITGAXP20702 1163 aa16.25■□□□□ 0.19
CCDC28B-202ENST00000421922 TLX1P31314 330 aaPredicted RBP16.25■□□□□ 0.19
CCDC28B-202ENST00000421922 BUD31P41223 144 aaPredicted RBP16.25■□□□□ 0.19
CCDC28B-202ENST00000421922 ZFP36L2P47974 494 aaKnown RBP16.25■□□□□ 0.19
CCDC28B-202ENST00000421922 ITGA1P56199 1179 aa16.25■□□□□ 0.19
CCDC28B-202ENST00000421922 GPR19Q15760 415 aa16.25■□□□□ 0.19
CCDC28B-202ENST00000421922 UGT8Q16880 541 aa16.25■□□□□ 0.19
CCDC28B-202ENST00000421922 MUM1Q2TAK8 710 aa16.25■□□□□ 0.19
CCDC28B-202ENST00000421922 CCDC157Q569K6 752 aa16.25■□□□□ 0.19
CCDC28B-202ENST00000421922 GARNL3Q5VVW2 1013 aa16.25■□□□□ 0.19
CCDC28B-202ENST00000421922 PRMT9Q6P2P2 845 aa16.25■□□□□ 0.19
CCDC28B-202ENST00000421922 CYB5D1Q6P9G0 228 aa16.25■□□□□ 0.19
CCDC28B-202ENST00000421922 HACD2Q6Y1H2 254 aa16.25■□□□□ 0.19
CCDC28B-202ENST00000421922 DGLUCYQ7Z3D6 616 aa16.25■□□□□ 0.19
CCDC28B-202ENST00000421922 DHDDSQ86SQ9 333 aa16.25■□□□□ 0.19
CCDC28B-202ENST00000421922 DEFB107AQ8IZN7 70 aa16.25■□□□□ 0.19
CCDC28B-202ENST00000421922 DSELQ8IZU8 1212 aa16.25■□□□□ 0.19
CCDC28B-202ENST00000421922 TM4SF18Q96CE8 201 aa16.25■□□□□ 0.19
CCDC28B-202ENST00000421922 IL1RL2Q9HB29 575 aa16.25■□□□□ 0.19
CCDC28B-202ENST00000421922 ATP6V1HQ9UI12 483 aa16.25■□□□□ 0.19
CCDC28B-202ENST00000421922 SERTAD3Q9UJW9 196 aa16.25■□□□□ 0.19
CCDC28B-202ENST00000421922 CROTQ9UKG9 612 aa16.25■□□□□ 0.19
CCDC28B-202ENST00000421922 ASCC3Q8N3C0 2202 aaKnown RBP16.25■□□□□ 0.19
CCDC28B-202ENST00000421922 CROCCQ5TZA2 2017 aa16.25■□□□□ 0.19
CCDC28B-202ENST00000421922 LAMA1P25391 3075 aa16.25■□□□□ 0.19
CCDC28B-202ENST00000421922 IGHV5-10-1A0A0J9YXX1 117 aa16.24■□□□□ 0.19
CCDC28B-202ENST00000421922 HYKKA2RU49 373 aa16.24■□□□□ 0.19
CCDC28B-202ENST00000421922 HCRTR1O43613 425 aa16.24■□□□□ 0.19
CCDC28B-202ENST00000421922 KLHL18O94889 574 aa16.24■□□□□ 0.19
CCDC28B-202ENST00000421922 ANP32DO95626 131 aa16.24■□□□□ 0.19
CCDC28B-202ENST00000421922 FURINP09958 794 aa16.24■□□□□ 0.19
CCDC28B-202ENST00000421922 DDCP20711 480 aa16.24■□□□□ 0.19
CCDC28B-202ENST00000421922 PGM1P36871 562 aa16.24■□□□□ 0.19
CCDC28B-202ENST00000421922 AVPR1BP47901 424 aa16.24■□□□□ 0.19
CCDC28B-202ENST00000421922 ACTN3Q08043 901 aaPredicted RBP16.24■□□□□ 0.19
CCDC28B-202ENST00000421922 LRRC74AQ0VAA2 488 aa16.24■□□□□ 0.19
CCDC28B-202ENST00000421922 TRA2AQ13595 282 aaKnown RBP eCLIP16.24■□□□□ 0.19
CCDC28B-202ENST00000421922 PRTGQ2VWP7 1150 aa16.24■□□□□ 0.19
CCDC28B-202ENST00000421922 FAM214AQ32MH5 1076 aa16.24■□□□□ 0.19
CCDC28B-202ENST00000421922 TRMT5Q32P41 509 aaKnown RBP16.24■□□□□ 0.19
CCDC28B-202ENST00000421922 OR4F3Q6IEY1 312 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms