RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 LPCAT3Q6P1A2 487 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 GGT6Q6P531 493 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 LAYNQ6UX15 382 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 HSD17B13Q7Z5P4 300 aaPredicted RBP5.03□□□□□ -1.6
HERC4-205ENST00000412272 STX19Q8N4C7 294 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 CBR4Q8N4T8 237 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 CCDC54Q8NEL0 328 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 OR1N1Q8NGS0 311 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 DUSP19Q8WTR2 217 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 TCEAL4Q96EI5 215 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 L3HYPDHQ96EM0 354 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 TAAR1Q96RJ0 339 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 SLC38A3Q99624 504 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 RTP3Q9BQQ7 232 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 RNF32Q9H0A6 362 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 POFUT1Q9H488 388 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 FBXO44Q9H4M3 255 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 ZNF395Q9H8N7 513 aaPredicted RBP5.03□□□□□ -1.6
HERC4-205ENST00000412272 NT5MQ9NPB1 228 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 TRMT13Q9NUP7 481 aaKnown RBP5.03□□□□□ -1.6
HERC4-205ENST00000412272 FAM50BQ9Y247 325 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 PCDHB7Q9Y5E2 793 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 CNTNAP4Q9C0A0 1308 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 A0A087X0M5 115 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 A0A1B0GX30 115 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 WASHC1A8K0Z3 465 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 ATP5J2-PTCD1G3V325 749 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 CBX4O00257 560 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 SMAD9O15198 467 aaKnown RBP5.03□□□□□ -1.6
HERC4-205ENST00000412272 CHADO15335 359 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 TGFB1I1O43294 461 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 TULP3O75386 442 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 LPLP06858 475 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 HLA-EP13747 358 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 IFNGR1P15260 489 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 CYP2B6P20813 491 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 MAGEA3P43357 314 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 NOVP48745 357 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 CLK2P49760 499 aaKnown RBP5.03□□□□□ -1.6
HERC4-205ENST00000412272 PRRX1P54821 245 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 SLC10A2Q12908 348 aaPredicted RBP5.03□□□□□ -1.6
HERC4-205ENST00000412272 RPA4Q13156 261 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 C1orf141Q5JVX7 400 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 AVPI1Q5T686 147 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 TNS2Q63HR2 1409 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 ESRP1Q6NXG1 681 aaKnown RBP5.03□□□□□ -1.6
HERC4-205ENST00000412272 SPESP1Q6UW49 350 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 CCDC190Q86UF4 302 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 DHRSXQ8N5I4 330 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 TMEM145Q8NBT3 493 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 ITFG1Q8TB96 612 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 STK35Q8TDR2 534 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 TM4SF18Q96CE8 201 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 SLITRK1Q96PX8 696 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 TRNT1Q96Q11 434 aaKnown RBP5.03□□□□□ -1.6
HERC4-205ENST00000412272 KLHL31Q9H511 634 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 EVA1AQ9H8M9 152 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 VAT1LQ9HCJ6 419 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 C6orf50Q9HD87 102 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 NIP7Q9Y221 180 aaKnown RBP eCLIP5.03□□□□□ -1.6
HERC4-205ENST00000412272 PADI2Q9Y2J8 665 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 KLK4Q9Y5K2 254 aa5.03□□□□□ -1.6
HERC4-205ENST00000412272 COL18A1P39060 1754 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 A0A1W2PPQ1 181 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 SOWAHBA6NEL2 793 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 TCAF2A6NFQ2 919 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 PDCD5O14737 125 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 SIGLEC5O15389 551 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 OIP5O43482 229 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 GPRIN2O60269 458 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 MED26O95402 600 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 MLYCDO95822 493 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 C6orf47O95873 294 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 LRG1P02750 347 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 LBPP18428 481 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 GIFP27352 417 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 THBS4P35443 961 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 ASPAP45381 313 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 SLC11A2P49281 568 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 SIGLEC14Q08ET2 396 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 EPS8Q12929 822 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 MAB21L1Q13394 359 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 ATP13A5Q4VNC0 1218 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 FBXW9Q5XUX1 488 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 MOXD1Q6UVY6 613 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 CES3Q6UWW8 571 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 ZNF551Q7Z340 670 aaPredicted RBP5.02□□□□□ -1.61
HERC4-205ENST00000412272 SAMD7Q7Z3H4 446 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 SIAH1Q8IUQ4 282 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 GPR137CQ8N3F9 429 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 NEK7Q8TDX7 302 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 UBASH3BQ8TF42 649 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 TRAPPC12Q8WVT3 735 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 SHDQ96IW2 340 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 MRI1Q9BV20 369 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 SARGQ9BW04 601 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 APOL6Q9BWW8 343 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 CRISPLD2Q9H0B8 497 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 RNF121Q9H920 327 aa5.02□□□□□ -1.61
HERC4-205ENST00000412272 CERS4Q9HA82 394 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms