RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 ZNF846Q147U1 533 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 MTX3Q5HYI7 312 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 TRAF7Q6Q0C0 670 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 ALKAL1Q6UXT8 129 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 SVOPLQ8N434 492 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 FAM86B1Q8N7N1 296 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 LRRN4CLQ8ND94 238 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 GSTCDQ8NEC7 633 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 GEMIN6Q8WXD5 167 aaKnown RBP4.82□□□□□ -1.64
SCN3A-203ENST00000409101 FRMD6Q96NE9 622 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 USB1Q9BQ65 265 aaKnown RBP4.82□□□□□ -1.64
SCN3A-203ENST00000409101 PDCD10Q9BUL8 212 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 HOXD1Q9GZZ0 328 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 NUAK2Q9H093 628 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 SLC24A3Q9HC58 644 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 IFT46Q9NQC8 304 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 GALPQ9UBC7 116 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 CYTH4Q9UIA0 394 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 MUTYHQ9UIF7 546 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 WDR45Q9Y484 360 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 A0A087WXM4 84 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.82□□□□□ -1.64
SCN3A-203ENST00000409101 PGRMC2O15173 223 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 ABLIM3O94929 683 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 F11P03951 625 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 IL3P08700 152 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 PABPC4LP0CB38 370 aaKnown RBP4.82□□□□□ -1.64
SCN3A-203ENST00000409101 POU2F1P14859 743 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 ACPPP15309 386 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 IL1RNP18510 177 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 AK4P27144 223 aaPredicted RBP4.82□□□□□ -1.64
SCN3A-203ENST00000409101 HMGCLP35914 325 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 ARHGDIBP52566 201 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 MTPNP58546 118 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 FAM189BP81408 668 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 ST3GAL3Q11203 375 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 ECH1Q13011 328 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 MALLQ13021 153 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 SGCAQ16586 387 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 ZNF630Q2M218 657 aaPredicted RBP4.82□□□□□ -1.64
SCN3A-203ENST00000409101 TMEM201Q5SNT2 666 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 PSAPL1Q6NUJ1 521 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 LARP4Q71RC2 724 aaKnown RBP eCLIP4.82□□□□□ -1.64
SCN3A-203ENST00000409101 ZNF440Q8IYI8 595 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 ESX1Q8N693 406 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 TEX19Q8NA77 164 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 KBTBD8Q8NFY9 601 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 SFXN2Q96NB2 322 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 OR6C1Q96RD1 312 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 MYADMQ96S97 322 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 MGME1Q9BQP7 344 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 ZIM2Q9NZV7 527 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 LGALS13Q9UHV8 139 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 CACNA1FO60840 1977 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 NUP98P52948 1817 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 hCG_2014768A0A024R1R8 64 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 C2orf92A0A1B0GVN3 265 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 CLIC1O00299 241 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 E2F3O00716 465 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 ATP6V1G2O95670 118 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 CXCL10P02778 98 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 HMGN1P05114 100 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 ZCCHC18P0CG32 403 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 POU3F2P20265 443 aaPredicted RBP4.82□□□□□ -1.64
SCN3A-203ENST00000409101 DNAJA1P31689 397 aaKnown RBP4.82□□□□□ -1.64
SCN3A-203ENST00000409101 CHN2P52757 468 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 RAB14P61106 215 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 PPP2R2BQ00005 443 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 LASP1Q14847 261 aaKnown RBP4.82□□□□□ -1.64
SCN3A-203ENST00000409101 NPTX1Q15818 432 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 TRIM16LQ309B1 348 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 PYDC2Q56P42 97 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 SPANXN2Q5MJ10 180 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 LHX8Q68G74 356 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 MZT2BQ6NZ67 158 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 TMEM107Q6UX40 140 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 ABHD12BQ7Z5M8 362 aaPredicted RBP4.82□□□□□ -1.64
SCN3A-203ENST00000409101 AMIGO2Q86SJ2 522 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 RNF130Q86XS8 419 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 WDTC1Q8N5D0 677 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 DENND6BQ8NEG7 585 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 NLGN4YQ8NFZ3 816 aaPredicted RBP4.82□□□□□ -1.64
SCN3A-203ENST00000409101 C1orf216Q8TAB5 229 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 TCTN2Q96GX1 697 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 ZFRQ96KR1 1074 aaKnown RBP4.82□□□□□ -1.64
SCN3A-203ENST00000409101 F2RL3Q96RI0 385 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 GPR22Q99680 433 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 STARD5Q9NSY2 213 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 POT1Q9NUX5 634 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 EHD3Q9NZN3 535 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 CDH22Q9UJ99 828 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 MMP17Q9ULZ9 603 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 ACTL7AQ9Y615 435 aa4.82□□□□□ -1.64
SCN3A-203ENST00000409101 SCN7AQ01118 1682 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 TRBV11-1A0A0K0K1C0 115 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 C17orf105B2RV13 164 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 BCKDKO14874 412 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 AK1P00568 194 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 EDN1P05305 212 aa4.81□□□□□ -1.64
SCN3A-203ENST00000409101 CBLP22681 906 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms