RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 MRPL48Q96GC5 212 aaKnown RBP7.12□□□□□ -1.27
HDAC9-202ENST00000405010 EGLN2Q96KS0 407 aa7.12□□□□□ -1.27
HDAC9-202ENST00000405010 HDHD5Q9BXW7 423 aa7.12□□□□□ -1.27
HDAC9-202ENST00000405010 CNOT2Q9NZN8 540 aaKnown RBP7.12□□□□□ -1.27
HDAC9-202ENST00000405010 COMMD9Q9P000 198 aa7.12□□□□□ -1.27
HDAC9-202ENST00000405010 NDRG4Q9ULP0 352 aaKnown RBP7.12□□□□□ -1.27
HDAC9-202ENST00000405010 FCF1Q9Y324 198 aaKnown RBP7.12□□□□□ -1.27
HDAC9-202ENST00000405010 OARD1Q9Y530 152 aa7.12□□□□□ -1.27
HDAC9-202ENST00000405010 A0A0D9SEW6 157 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 A0A0G2JPF8 293 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 A0A1B0GTL3 188 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 A0A1B0GVM2 712 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 WASHC1A8K0Z3 465 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 HNRNPCL3B7ZW38 293 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 SMLR1H3BR10 107 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 SLC9A3R1O14745 358 aaPredicted RBP7.11□□□□□ -1.27
HDAC9-202ENST00000405010 PROM1O43490 865 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 APOC3P02656 99 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 HNRNPCL4P0DMR1 293 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 ETFAP13804 333 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 LHCGRP22888 699 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 CHRNA6Q15825 494 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 MICAQ29983 383 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 FLYWCH1Q4VC44 716 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 MFSD14CQ5VZR4 134 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 ARL9Q6T311 187 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 LHFPL3Q86UP9 236 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 SLC22A15Q8IZD6 547 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 COQ8AQ8NI60 647 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 IGSF8Q969P0 613 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 C1orf74Q96LT6 269 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 CXCL16Q9H2A7 254 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 IKZF5Q9H5V7 419 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 NUDT15Q9NV35 164 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 QPCTLQ9NXS2 382 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 KLHL21Q9UJP4 597 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 POLHQ9Y253 713 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 NINQ8N4C6 2090 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 LOC105369274A0A096LPK9 316 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 MROH6A6NGR9 719 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 H7C2Y5 167 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 SAP18O00422 153 aaKnown RBP7.11□□□□□ -1.27
HDAC9-202ENST00000405010 ERAL1O75616 437 aaKnown RBP7.11□□□□□ -1.27
HDAC9-202ENST00000405010 C6orf47O95873 294 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 PLATP00750 562 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 BCHEP06276 602 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 LAMP1P11279 417 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 APEX1P27695 318 aaKnown RBP7.11□□□□□ -1.27
HDAC9-202ENST00000405010 CD52P31358 61 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 PSMD4P55036 377 aaKnown RBP7.11□□□□□ -1.27
HDAC9-202ENST00000405010 CDH11P55287 796 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 RRAS2P62070 204 aaPredicted RBP7.11□□□□□ -1.27
HDAC9-202ENST00000405010 HSPB3Q12988 150 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 VEZF1Q14119 521 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 UAP1L1Q3KQV9 507 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 PAQR9Q6ZVX9 377 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 OR4N4Q8N0Y3 316 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 FTMTQ8N4E7 242 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 ZNF433Q8N7K0 673 aaPredicted RBP7.11□□□□□ -1.27
HDAC9-202ENST00000405010 OR10H4Q8NGA5 316 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 GATAD2BQ8WXI9 593 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 USP7Q93009 1102 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 APIPQ96GX9 242 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 LRR1Q96L50 414 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 UROC1Q96N76 676 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 PSKH2Q96QS6 385 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 TBX5Q99593 518 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 CACNG6Q9BXT2 260 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 SLITRK2Q9H156 845 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 SAV1Q9H4B6 383 aaPredicted RBP7.11□□□□□ -1.27
HDAC9-202ENST00000405010 PRDM5Q9NQX1 630 aaPredicted RBP7.11□□□□□ -1.27
HDAC9-202ENST00000405010 TMPRSS11EQ9UL52 423 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 ZFR2Q9UPR6 939 aaKnown RBP7.11□□□□□ -1.27
HDAC9-202ENST00000405010 TRIP11Q15643 1979 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.11□□□□□ -1.27
HDAC9-202ENST00000405010 H7C4K7 107 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 PCDH17O14917 1159 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 SEPT4O43236 478 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 CH25HO95992 272 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 GBAP04062 536 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 S100A6P06703 90 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 SLC10A3P09131 477 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 SMPD1P17405 629 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 SDC1P18827 310 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 DDCP20711 480 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 PCMT1P22061 227 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 RPS19P39019 145 aaKnown RBP7.11□□□□□ -1.27
HDAC9-202ENST00000405010 GZMKP49863 264 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 HNMTP50135 292 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 AP3S2P59780 193 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 BTN1A1Q13410 526 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 SF3A2Q15428 464 aaKnown RBP7.11□□□□□ -1.27
HDAC9-202ENST00000405010 SLC14A2Q15849 920 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 OTUD1Q5VV17 481 aaPredicted RBP7.11□□□□□ -1.27
HDAC9-202ENST00000405010 LIN54Q6MZP7 749 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 NCEH1Q6PIU2 408 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 CEACAM20Q6UY09 585 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 TRAPPC5Q8IUR0 188 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 GRAMD2AQ8IUY3 354 aa7.11□□□□□ -1.27
HDAC9-202ENST00000405010 TBC1D19Q8N5T2 526 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms