RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 SPDYE7PQ495Y7 208 aa13.72□□□□□ -0.21
CLIP2-203ENST00000395060 FBXO43Q4G163 708 aa13.72□□□□□ -0.21
CLIP2-203ENST00000395060 SLX4IPQ5VYV7 408 aa13.72□□□□□ -0.21
CLIP2-203ENST00000395060 C1GALT1C1Q96EU7 318 aa13.72□□□□□ -0.21
CLIP2-203ENST00000395060 FUBP3Q96I24 572 aaKnown RBP eCLIP13.72□□□□□ -0.21
CLIP2-203ENST00000395060 TM9SF2Q99805 663 aa13.72□□□□□ -0.21
CLIP2-203ENST00000395060 SLC35A5Q9BS91 424 aa13.72□□□□□ -0.21
CLIP2-203ENST00000395060 SLC29A3Q9BZD2 475 aa13.72□□□□□ -0.21
CLIP2-203ENST00000395060 SGK2Q9HBY8 427 aa13.72□□□□□ -0.21
CLIP2-203ENST00000395060 DNAJC11Q9NVH1 559 aa13.72□□□□□ -0.21
CLIP2-203ENST00000395060 NLKQ9UBE8 527 aa13.72□□□□□ -0.21
CLIP2-203ENST00000395060 HSPB11Q9Y547 144 aa13.72□□□□□ -0.21
CLIP2-203ENST00000395060 MYO10Q9HD67 2058 aa13.72□□□□□ -0.21
CLIP2-203ENST00000395060 TRBV4-1A0A0J9YWV2 114 aa13.71□□□□□ -0.21
CLIP2-203ENST00000395060 A0A1W2PQ72 361 aa13.71□□□□□ -0.21
CLIP2-203ENST00000395060 TMEM202A6NGA9 273 aa13.71□□□□□ -0.21
CLIP2-203ENST00000395060 CENPBD1B2RD01 187 aa13.71□□□□□ -0.21
CLIP2-203ENST00000395060 CSO75390 466 aaKnown RBP13.71□□□□□ -0.21
CLIP2-203ENST00000395060 YES1P07947 543 aa13.71□□□□□ -0.21
CLIP2-203ENST00000395060 UQCRC1P31930 480 aa13.71□□□□□ -0.21
CLIP2-203ENST00000395060 GPC1P35052 558 aa13.71□□□□□ -0.21
CLIP2-203ENST00000395060 KIR2DL3P43628 341 aa13.71□□□□□ -0.21
CLIP2-203ENST00000395060 STK19P49842 368 aaPredicted RBP13.71□□□□□ -0.21
CLIP2-203ENST00000395060 LSM11P83369 360 aaKnown RBP eCLIP13.71□□□□□ -0.21
CLIP2-203ENST00000395060 B4GALNT1Q00973 533 aa13.71□□□□□ -0.21
CLIP2-203ENST00000395060 SRSF11Q05519 484 aaKnown RBP13.71□□□□□ -0.21
CLIP2-203ENST00000395060 SCN1BQ07699 218 aa13.71□□□□□ -0.21
CLIP2-203ENST00000395060 HYAL2Q12891 473 aa13.71□□□□□ -0.21
CLIP2-203ENST00000395060 PLD1Q13393 1074 aa13.71□□□□□ -0.21
CLIP2-203ENST00000395060 DOC2AQ14183 400 aa13.71□□□□□ -0.21
CLIP2-203ENST00000395060 SPHARQ15513 63 aa13.71□□□□□ -0.21
CLIP2-203ENST00000395060 DUSP7Q16829 419 aa13.71□□□□□ -0.21
CLIP2-203ENST00000395060 BTBD16Q32M84 506 aa13.71□□□□□ -0.21
CLIP2-203ENST00000395060 PLAG1Q6DJT9 500 aa13.71□□□□□ -0.21
CLIP2-203ENST00000395060 NPAS3Q8IXF0 933 aa13.71□□□□□ -0.21
CLIP2-203ENST00000395060 HJURPQ8NCD3 748 aaPredicted RBP13.71□□□□□ -0.21
CLIP2-203ENST00000395060 SCAMP4Q969E2 229 aa13.71□□□□□ -0.21
CLIP2-203ENST00000395060 CEP295NLQ96MC4 621 aa13.71□□□□□ -0.21
CLIP2-203ENST00000395060 UCK2Q9BZX2 261 aa13.71□□□□□ -0.21
CLIP2-203ENST00000395060 NMNAT1Q9HAN9 279 aaPredicted RBP13.71□□□□□ -0.21
CLIP2-203ENST00000395060 TVP23BQ9NYZ1 205 aa13.71□□□□□ -0.21
CLIP2-203ENST00000395060 DKK3Q9UBP4 350 aa13.71□□□□□ -0.21
CLIP2-203ENST00000395060 H7C0S8 307 aa13.71□□□□□ -0.21
CLIP2-203ENST00000395060 OR10H3O60404 316 aa13.71□□□□□ -0.21
CLIP2-203ENST00000395060 GABRB1P18505 474 aa13.71□□□□□ -0.21
CLIP2-203ENST00000395060 SDC2P34741 201 aa13.71□□□□□ -0.21
CLIP2-203ENST00000395060 DDOSTP39656 456 aa13.71□□□□□ -0.21
CLIP2-203ENST00000395060 IL12RB1P42701 662 aa13.71□□□□□ -0.21
CLIP2-203ENST00000395060 PREPP48147 710 aa13.71□□□□□ -0.21
CLIP2-203ENST00000395060 PTPN5P54829 565 aa13.71□□□□□ -0.21
CLIP2-203ENST00000395060 MBTPS1Q14703 1052 aa13.71□□□□□ -0.21
CLIP2-203ENST00000395060 TIMM50Q3ZCQ8 353 aa13.71□□□□□ -0.21
CLIP2-203ENST00000395060 OR2G6Q5TZ20 316 aa13.71□□□□□ -0.21
CLIP2-203ENST00000395060 TNFAIP8L2Q6P589 184 aaPredicted RBP13.71□□□□□ -0.21
CLIP2-203ENST00000395060 ZNF367Q7RTV3 350 aa13.71□□□□□ -0.21
CLIP2-203ENST00000395060 RBM45Q8IUH3 476 aaKnown RBP13.71□□□□□ -0.21
CLIP2-203ENST00000395060 TIGD4Q8IY51 512 aa13.71□□□□□ -0.21
CLIP2-203ENST00000395060 NLGN4YQ8NFZ3 816 aaPredicted RBP13.71□□□□□ -0.21
CLIP2-203ENST00000395060 CSGALNACT1Q8TDX6 532 aa13.71□□□□□ -0.21
CLIP2-203ENST00000395060 MTERF3Q96E29 417 aa13.71□□□□□ -0.21
CLIP2-203ENST00000395060 SNX7Q9UNH6 387 aa13.71□□□□□ -0.21
CLIP2-203ENST00000395060 CMAHPQ9Y471 501 aa13.71□□□□□ -0.21
CLIP2-203ENST00000395060 SNX11Q9Y5W9 270 aa13.71□□□□□ -0.21
CLIP2-203ENST00000395060 B4DXG7 233 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 PLK4O00444 970 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 PSIP1O75475 530 aaKnown RBP13.7□□□□□ -0.22
CLIP2-203ENST00000395060 TGFB1P01137 390 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 HBQ1P09105 142 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 CSF3P09919 207 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 IFNA8P32881 189 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 PTGER1P34995 402 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 MAN2A2P49641 1150 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 CSNK2BP67870 215 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 INSL4Q14641 139 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 MPPE1Q53F39 396 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 TYW3Q6IPR3 259 aaKnown RBP13.7□□□□□ -0.22
CLIP2-203ENST00000395060 DEF8Q6ZN54 512 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 FRMD6Q96NE9 622 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 SLC22A12Q96S37 553 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 CCDC32Q9BV29 185 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 SRRQ9GZT4 340 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 PCDH10Q9P2E7 1040 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 CLEC4EQ9ULY5 219 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 KLK4Q9Y5K2 254 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 NLRC5Q86WI3 1866 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 KCNE1BA0A087WTH5 132 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 TRBC2A0A5B9 178 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 CKBP12277 381 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 ANXA8P13928 327 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 ITGA2P17301 1181 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 RING1Q06587 406 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 TTC23LQ6PF05 361 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 USP30Q70CQ3 517 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 RAB8BQ92930 207 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 SORBS1Q9BX66 1292 aaKnown RBP13.7□□□□□ -0.22
CLIP2-203ENST00000395060 ZNF717Q9BY31 904 aaPredicted RBP13.7□□□□□ -0.22
CLIP2-203ENST00000395060 SLC22A4Q9H015 551 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 KCTD5Q9NXV2 234 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 PRKAB1Q9Y478 270 aa13.7□□□□□ -0.22
CLIP2-203ENST00000395060 SPIN1Q9Y657 262 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms