RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 SORBS1Q9BX66 1292 aaKnown RBP10.12□□□□□ -0.79
CALD1-203ENST00000393118 XKR8Q9H6D3 395 aa10.12□□□□□ -0.79
CALD1-203ENST00000393118 CLN6Q9NWW5 311 aa10.12□□□□□ -0.79
CALD1-203ENST00000393118 GULP1Q9UBP9 304 aa10.12□□□□□ -0.79
CALD1-203ENST00000393118 SBF1O95248 1867 aa10.12□□□□□ -0.79
CALD1-203ENST00000393118 MIA3Q5JRA6 1907 aa10.12□□□□□ -0.79
CALD1-203ENST00000393118 TRBC2A0A5B9 178 aa10.12□□□□□ -0.79
CALD1-203ENST00000393118 AIREO43918 545 aa10.12□□□□□ -0.79
CALD1-203ENST00000393118 PAK4O96013 591 aaPredicted RBP10.12□□□□□ -0.79
CALD1-203ENST00000393118 RETP07949 1114 aa10.12□□□□□ -0.79
CALD1-203ENST00000393118 IL3P08700 152 aa10.12□□□□□ -0.79
CALD1-203ENST00000393118 RPP38P78345 283 aaKnown RBP10.12□□□□□ -0.79
CALD1-203ENST00000393118 PYCR3Q53H96 274 aa10.12□□□□□ -0.79
CALD1-203ENST00000393118 KIAA1614Q5VZ46 1190 aa10.12□□□□□ -0.79
CALD1-203ENST00000393118 ADNP2Q6IQ32 1131 aa10.12□□□□□ -0.79
CALD1-203ENST00000393118 COMMD6Q7Z4G1 85 aa10.12□□□□□ -0.79
CALD1-203ENST00000393118 TRIM46Q7Z4K8 759 aa10.12□□□□□ -0.79
CALD1-203ENST00000393118 BPIFB1Q8TDL5 484 aa10.12□□□□□ -0.79
CALD1-203ENST00000393118 SH3YL1Q96HL8 342 aaPredicted RBP10.12□□□□□ -0.79
CALD1-203ENST00000393118 CTRCQ99895 268 aa10.12□□□□□ -0.79
CALD1-203ENST00000393118 FUNDC2Q9BWH2 189 aa10.12□□□□□ -0.79
CALD1-203ENST00000393118 OR2B2Q9GZK3 357 aa10.12□□□□□ -0.79
CALD1-203ENST00000393118 REEP4Q9H6H4 257 aa10.12□□□□□ -0.79
CALD1-203ENST00000393118 H2AFY2Q9P0M6 372 aaPredicted RBP10.12□□□□□ -0.79
CALD1-203ENST00000393118 PCDHGA10Q9Y5H3 936 aa10.12□□□□□ -0.79
CALD1-203ENST00000393118 MYO10Q9HD67 2058 aa10.11□□□□□ -0.79
CALD1-203ENST00000393118 GABRR3A8MPY1 467 aa10.11□□□□□ -0.79
CALD1-203ENST00000393118 SLC16A5O15375 505 aa10.11□□□□□ -0.79
CALD1-203ENST00000393118 SOX14O95416 240 aa10.11□□□□□ -0.79
CALD1-203ENST00000393118 MT-ND2P03891 347 aa10.11□□□□□ -0.79
CALD1-203ENST00000393118 C6P13671 934 aa10.11□□□□□ -0.79
CALD1-203ENST00000393118 KELP23276 732 aa10.11□□□□□ -0.79
CALD1-203ENST00000393118 HEPACAMQ14CZ8 416 aa10.11□□□□□ -0.79
CALD1-203ENST00000393118 TCEAL5Q5H9L2 206 aa10.11□□□□□ -0.79
CALD1-203ENST00000393118 VITQ6UXI7 678 aa10.11□□□□□ -0.79
CALD1-203ENST00000393118 LIPIQ6XZB0 460 aa10.11□□□□□ -0.79
CALD1-203ENST00000393118 PARS2Q7L3T8 475 aaKnown RBP10.11□□□□□ -0.79
CALD1-203ENST00000393118 FAM20CQ8IXL6 584 aa10.11□□□□□ -0.79
CALD1-203ENST00000393118 WDR36Q8NI36 951 aaKnown RBP10.11□□□□□ -0.79
CALD1-203ENST00000393118 SGCDQ92629 289 aa10.11□□□□□ -0.79
CALD1-203ENST00000393118 CIDECQ96AQ7 238 aaPredicted RBP10.11□□□□□ -0.79
CALD1-203ENST00000393118 COL21A1Q96P44 957 aa10.11□□□□□ -0.79
CALD1-203ENST00000393118 RBM38Q9H0Z9 239 aaKnown RBP10.11□□□□□ -0.79
CALD1-203ENST00000393118 ACTL8Q9H568 366 aa10.11□□□□□ -0.79
CALD1-203ENST00000393118 ARPC4-TTLL3A0A0A6YYG9 625 aa10.11□□□□□ -0.79
CALD1-203ENST00000393118 ISPDA4D126 451 aa10.11□□□□□ -0.79
CALD1-203ENST00000393118 SAGE2PA6NJ88 616 aa10.11□□□□□ -0.79
CALD1-203ENST00000393118 C1GALT1C1LP0DN25 315 aa10.11□□□□□ -0.79
CALD1-203ENST00000393118 HOXB6P17509 224 aaKnown RBP10.11□□□□□ -0.79
CALD1-203ENST00000393118 MAPK9P45984 424 aa10.11□□□□□ -0.79
CALD1-203ENST00000393118 CSNK1DP48730 415 aa10.11□□□□□ -0.79
CALD1-203ENST00000393118 ANXA11P50995 505 aaKnown RBP10.11□□□□□ -0.79
CALD1-203ENST00000393118 TBRG1Q3YBR2 411 aa10.11□□□□□ -0.79
CALD1-203ENST00000393118 PDZK1Q5T2W1 519 aa10.11□□□□□ -0.79
CALD1-203ENST00000393118 C7orf61Q8IZ16 206 aa10.11□□□□□ -0.79
CALD1-203ENST00000393118 RDH12Q96NR8 316 aa10.11□□□□□ -0.79
CALD1-203ENST00000393118 UHRF1Q96T88 793 aaPredicted RBP10.11□□□□□ -0.79
CALD1-203ENST00000393118 FNDC11Q9BVV2 318 aa10.11□□□□□ -0.79
CALD1-203ENST00000393118 CPEB1Q9BZB8 566 aaKnown RBP10.11□□□□□ -0.79
CALD1-203ENST00000393118 DNMT3BQ9UBC3 853 aaKnown RBP10.11□□□□□ -0.79
CALD1-203ENST00000393118 OR51B4Q9Y5P0 310 aa10.11□□□□□ -0.79
CALD1-203ENST00000393118 FEZF1A0PJY2 475 aa10.11□□□□□ -0.79
CALD1-203ENST00000393118 SCAMP2O15127 329 aaKnown RBP10.11□□□□□ -0.79
CALD1-203ENST00000393118 CCR2P41597 374 aa10.11□□□□□ -0.79
CALD1-203ENST00000393118 TMBIM6P55061 237 aa10.11□□□□□ -0.79
CALD1-203ENST00000393118 FPGSQ05932 587 aa10.11□□□□□ -0.79
CALD1-203ENST00000393118 PPIGQ13427 754 aaKnown RBP eCLIP10.11□□□□□ -0.791e-6■■■■□ 24.6
CALD1-203ENST00000393118 C1DQ13901 141 aaKnown RBP10.11□□□□□ -0.79
CALD1-203ENST00000393118 SMN1Q16637 294 aaKnown RBP10.11□□□□□ -0.79
CALD1-203ENST00000393118 GPR149Q86SP6 731 aa10.11□□□□□ -0.79
CALD1-203ENST00000393118 TMEM150AQ86TG1 271 aa10.11□□□□□ -0.79
CALD1-203ENST00000393118 HDDC3Q8N4P3 179 aa10.11□□□□□ -0.79
CALD1-203ENST00000393118 CHCHD4Q8N4Q1 142 aa10.11□□□□□ -0.79
CALD1-203ENST00000393118 OR10G6Q8NH81 332 aa10.11□□□□□ -0.79
CALD1-203ENST00000393118 ISG20Q96AZ6 181 aaKnown RBP10.11□□□□□ -0.79
CALD1-203ENST00000393118 ZNF514Q96K75 400 aaPredicted RBP10.11□□□□□ -0.79
CALD1-203ENST00000393118 F2RL3Q96RI0 385 aa10.11□□□□□ -0.79
CALD1-203ENST00000393118 FEVQ99581 238 aa10.11□□□□□ -0.79
CALD1-203ENST00000393118 CPPED1Q9BRF8 314 aaPredicted RBP10.11□□□□□ -0.79
CALD1-203ENST00000393118 TRMT61BQ9BVS5 477 aaKnown RBP10.11□□□□□ -0.79
CALD1-203ENST00000393118 SLC6A13Q9NSD5 602 aa10.11□□□□□ -0.79
CALD1-203ENST00000393118 ZCCHC3Q9NUD5 404 aaKnown RBP10.11□□□□□ -0.79
CALD1-203ENST00000393118 TCRBV5S2A0A599 114 aa10.1□□□□□ -0.79
CALD1-203ENST00000393118 GRXCR2A6NFK2 248 aa10.1□□□□□ -0.79
CALD1-203ENST00000393118 FADS2P1A8MWK0 482 aa10.1□□□□□ -0.79
CALD1-203ENST00000393118 MYL12BO14950 172 aa10.1□□□□□ -0.79
CALD1-203ENST00000393118 PDPK1O15530 556 aa10.1□□□□□ -0.79
CALD1-203ENST00000393118 CCNB2O95067 398 aa10.1□□□□□ -0.79
CALD1-203ENST00000393118 WISP3O95389 354 aaPredicted RBP10.1□□□□□ -0.79
CALD1-203ENST00000393118 HPRP00739 348 aa10.1□□□□□ -0.79
CALD1-203ENST00000393118 PRR35P0CG20 571 aa10.1□□□□□ -0.79
CALD1-203ENST00000393118 CEBPBP17676 345 aa10.1□□□□□ -0.79
CALD1-203ENST00000393118 CD9P21926 228 aa10.1□□□□□ -0.79
CALD1-203ENST00000393118 DDX6P26196 483 aaKnown RBP eCLIP10.1□□□□□ -0.79
CALD1-203ENST00000393118 ALDH3B2P48448 385 aa10.1□□□□□ -0.79
CALD1-203ENST00000393118 UGT2B15P54855 530 aa10.1□□□□□ -0.79
CALD1-203ENST00000393118 DSTNP60981 165 aa10.1□□□□□ -0.79
CALD1-203ENST00000393118 RACK1P63244 317 aaKnown RBP10.1□□□□□ -0.79
CALD1-203ENST00000393118 FAM209AQ5JX71 171 aa10.1□□□□□ -0.79
CALD1-203ENST00000393118 AMIGO1Q86WK6 493 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms