RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 TMX3Q96JJ7 454 aa-2.63□□□□□ -2.83
RNU6-1340P-201ENST00000384438 QRFPRQ96P65 431 aa-2.63□□□□□ -2.83
RNU6-1340P-201ENST00000384438 CHAC1Q9BUX1 264 aa-2.63□□□□□ -2.83
RNU6-1340P-201ENST00000384438 NT5C1AQ9BXI3 368 aa-2.63□□□□□ -2.83
RNU6-1340P-201ENST00000384438 IFIH1Q9BYX4 1025 aaKnown RBP-2.63□□□□□ -2.83
RNU6-1340P-201ENST00000384438 DCLRE1BQ9H816 532 aa-2.63□□□□□ -2.83
RNU6-1340P-201ENST00000384438 MOB1AQ9H8S9 216 aa-2.63□□□□□ -2.83
RNU6-1340P-201ENST00000384438 ZNF490Q9ULM2 529 aaPredicted RBP-2.63□□□□□ -2.83
RNU6-1340P-201ENST00000384438 MTMR7Q9Y216 660 aa-2.63□□□□□ -2.83
RNU6-1340P-201ENST00000384438 F5P12259 2224 aa-2.63□□□□□ -2.83
RNU6-1340P-201ENST00000384438 USF3Q68DE3 2245 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 A0A1B0GTI1 187 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 TCRBV7S3A2A0A539 114 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 RGSL1A5PLK6 1076 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 OR5K3A6NET4 321 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 C2orf81A6NN90 581 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 FOXI3A8MTJ6 420 aaPredicted RBP-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 XKRYO14609 159 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 GEMIN2O14893 280 aaKnown RBP-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 MCF2LO15068 1137 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 NKX2-8O15522 239 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 RBFOX2O43251 390 aaKnown RBP eCLIP-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 PRODHO43272 600 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 ZNF749O43361 778 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 ICMTO60725 284 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 ERLIN1O75477 346 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 ASMTLO95671 621 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 ZNF682O95780 498 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 GNAI3P08754 354 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 VIL1P09327 827 aaKnown RBP-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 CTRB1P17538 263 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 CKMT2P17540 419 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 IGFBP2P18065 325 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 PGAM1P18669 254 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 RRM1P23921 792 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 HOXD10P28358 340 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 RAD52P43351 418 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 OR3A4PP47883 348 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 TDO2P48775 406 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 THOP1P52888 689 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 CASP7P55210 303 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 CDH11P55287 796 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 NLRP11P59045 1033 aaKnown RBP-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 GNAI1P63096 354 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 RACK1P63244 317 aaKnown RBP-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 CSNK2A1P68400 391 aaPredicted RBP-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 SATB1Q01826 763 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 DMTNQ08495 405 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 SPAG11BQ08648 103 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 CAPSQ13938 189 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 SLC9A3R2Q15599 337 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 ASPRV1Q53RT3 343 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 CMPK2Q5EBM0 449 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 ARL13AQ5H913 290 aaPredicted RBP-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 TMEM164Q5U3C3 297 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 SLC22A10Q63ZE4 541 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 STUMQ69YW2 141 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 LGALS9CQ6DKI2 356 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 ACSM5Q6NUN0 579 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 UFSP1Q6NVU6 142 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 CXCL17Q6UXB2 119 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 CLEC18BQ6UXF7 455 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 CASP12Q6UXS9 341 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 PRSS58Q8IYP2 241 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 PGAM4Q8N0Y7 254 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 SLC22A18ASQ8N1D0 253 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 C2orf73Q8N5S3 287 aaPredicted RBP-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 ZBTB2Q8N680 514 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 FAM86B1Q8N7N1 296 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 ZDHHC22Q8N966 263 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 L3MBTL4Q8NA19 623 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 CSNK2A3Q8NEV1 391 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 CSGALNACT1Q8TDX6 532 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 RNF139Q8WU17 664 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 RNF133Q8WVZ7 376 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 KCNE4Q8WWG9 221 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 DCUN1D4Q92564 292 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 SLC25A38Q96DW6 304 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 TRIM44Q96DX7 344 aaPredicted RBP-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 IGF2BP2-AS1Q96M15 143 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 CDC6Q99741 560 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 TEX13AQ9BXU3 409 aaPredicted RBP-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 RAB34Q9BZG1 259 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 PPP1R3EQ9H7J1 279 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 ST6GALNAC1Q9NSC7 600 aaPredicted RBP-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 TMEM161AQ9NX61 479 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 C6orf203Q9P0P8 240 aaPredicted RBP-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 BAIAP2L1Q9UHR4 511 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 ZNF346Q9UL40 294 aaKnown RBP-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 MKLN1Q9UL63 735 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 PRPF19Q9UMS4 504 aaKnown RBP-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 ZNF148Q9UQR1 794 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 OSGIN2Q9Y236 505 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 SLC27A6Q9Y2P4 619 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 ANKRD12Q6UB98 2062 aa-2.64□□□□□ -2.83
RNU6-1340P-201ENST00000384438 PSMB11A5LHX3 300 aa-2.65□□□□□ -2.83
RNU6-1340P-201ENST00000384438 TREHO43280 583 aa-2.65□□□□□ -2.83
RNU6-1340P-201ENST00000384438 ERAL1O75616 437 aaKnown RBP-2.65□□□□□ -2.83
RNU6-1340P-201ENST00000384438 KRT38O76015 456 aa-2.65□□□□□ -2.83
RNU6-1340P-201ENST00000384438 LY6HO94772 140 aa-2.65□□□□□ -2.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms