RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 RBMX2Q9Y388 322 aaKnown RBP17.13■□□□□ 0.33
CNTNAP3-204ENST00000377656 TTC34A8MYJ7 566 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 IL3P08700 152 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 PEPDP12955 493 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 PGAM2P15259 253 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 CD9P21926 228 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 KCNC1P48547 511 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 TUBA3CQ13748 450 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 UAP1L1Q3KQV9 507 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 SFT2D3Q587I9 215 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 PDLIM7Q9NR12 457 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 TUBA8Q9NY65 449 aaPredicted RBP17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 DNAJC27Q9NZQ0 273 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 MAFFQ9ULX9 164 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 CYP8B1Q9UNU6 501 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 HTRA2O43464 458 aaPredicted RBP17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 IVDP26440 423 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 GRIK2Q13002 908 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 RAB33AQ14088 237 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 DSG2Q14126 1118 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 EZH1Q92800 747 aaPredicted RBP17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 PNPLA2Q96AD5 504 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 TMEM80Q96HE8 168 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 HAPLN2Q9GZV7 340 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 GRHPRQ9UBQ7 328 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 PCDHB14Q9Y5E9 798 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 GON4LQ3T8J9 2241 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 RFPL2O75678 378 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 TBPL1P62380 186 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 ZNF550Q7Z398 422 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 TOMM5Q8N4H5 51 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 SORCS1Q8WY21 1168 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 SH3YL1Q96HL8 342 aaPredicted RBP17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 SLC45A3Q96JT2 553 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 PTCHD1Q96NR3 888 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 CCDC106Q9BWC9 280 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 B3GAT2Q9NPZ5 323 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 AIG1Q9NVV5 245 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 PCDHGA10Q9Y5H3 936 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 METTL21EPA6NDL7 271 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 GRXCR1A8MXD5 290 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 VILLO15195 856 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 RNGTTO60942 597 aaKnown RBP17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 TRAPPC6AO75865 159 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 CD72P21854 359 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 GADD45AP24522 165 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 SUOXP51687 545 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 CBFBQ13951 182 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 DOC2AQ14183 400 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 SLC36A4Q6YBV0 504 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 CEP76Q8TAP6 659 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 CCDC107Q8WV48 283 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 ZNF689Q96CS4 500 aaPredicted RBP17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 STRA6Q9BX79 667 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 WDR6Q9NNW5 1121 aaKnown RBP17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 MGAT4AQ9UM21 535 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 MEMO1Q9Y316 297 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 PCDHGB2Q9Y5G2 931 aa17.12■□□□□ 0.33
CNTNAP3-204ENST00000377656 CSTBP04080 98 aaKnown RBP17.11■□□□□ 0.33
CNTNAP3-204ENST00000377656 ITGB1P05556 798 aa17.11■□□□□ 0.33
CNTNAP3-204ENST00000377656 CDKN2DP55273 166 aa17.11■□□□□ 0.33
CNTNAP3-204ENST00000377656 FLYWCH1Q4VC44 716 aa17.11■□□□□ 0.33
CNTNAP3-204ENST00000377656 ABCA11PQ4W5N1 156 aa17.11■□□□□ 0.33
CNTNAP3-204ENST00000377656 SLC35F1Q5T1Q4 408 aa17.11■□□□□ 0.33
CNTNAP3-204ENST00000377656 TUBA3EQ6PEY2 450 aa17.11■□□□□ 0.33
CNTNAP3-204ENST00000377656 CARM1Q86X55 608 aa17.11■□□□□ 0.33
CNTNAP3-204ENST00000377656 KRTCAP2Q8N6L1 136 aa17.11■□□□□ 0.33
CNTNAP3-204ENST00000377656 ZNF548Q8NEK5 533 aaPredicted RBP17.11■□□□□ 0.33
CNTNAP3-204ENST00000377656 MEAF6Q9HAF1 191 aa17.11■□□□□ 0.33
CNTNAP3-204ENST00000377656 C2orf92A0A1B0GVN3 265 aa17.11■□□□□ 0.33
CNTNAP3-204ENST00000377656 TPD52L2O43399 206 aaKnown RBP17.11■□□□□ 0.33
CNTNAP3-204ENST00000377656 ABCB7O75027 752 aa17.11■□□□□ 0.33
CNTNAP3-204ENST00000377656 PFKLP17858 780 aa17.11■□□□□ 0.33
CNTNAP3-204ENST00000377656 FDXRP22570 491 aa17.11■□□□□ 0.33
CNTNAP3-204ENST00000377656 F8A1P23610 371 aa17.11■□□□□ 0.33
CNTNAP3-204ENST00000377656 OR2B6P58173 313 aa17.11■□□□□ 0.33
CNTNAP3-204ENST00000377656 ZNF234Q14588 700 aa17.11■□□□□ 0.33
CNTNAP3-204ENST00000377656 WSCD2Q2TBF2 565 aa17.11■□□□□ 0.33
CNTNAP3-204ENST00000377656 CYP27C1Q4G0S4 372 aa17.11■□□□□ 0.33
CNTNAP3-204ENST00000377656 DEFB134Q4QY38 66 aa17.11■□□□□ 0.33
CNTNAP3-204ENST00000377656 NCEH1Q6PIU2 408 aa17.11■□□□□ 0.33
CNTNAP3-204ENST00000377656 ZNF773Q6PK81 442 aa17.11■□□□□ 0.33
CNTNAP3-204ENST00000377656 HSPBAP1Q96EW2 488 aa17.11■□□□□ 0.33
CNTNAP3-204ENST00000377656 IL21RQ9HBE5 538 aa17.11■□□□□ 0.33
CNTNAP3-204ENST00000377656 LIPT1Q9Y234 373 aa17.11■□□□□ 0.33
CNTNAP3-204ENST00000377656 TCRBV21S2A2A0A5A6 115 aa17.11■□□□□ 0.33
CNTNAP3-204ENST00000377656 GLDCP23378 1020 aa17.11■□□□□ 0.33
CNTNAP3-204ENST00000377656 ZNF41P51814 821 aaPredicted RBP17.11■□□□□ 0.33
CNTNAP3-204ENST00000377656 C4orf46Q504U0 113 aa17.11■□□□□ 0.33
CNTNAP3-204ENST00000377656 DPH7Q9BTV6 452 aa17.11■□□□□ 0.33
CNTNAP3-204ENST00000377656 CHIAQ9BZP6 476 aa17.11■□□□□ 0.33
CNTNAP3-204ENST00000377656 TMEM9Q9P0T7 183 aa17.11■□□□□ 0.33
CNTNAP3-204ENST00000377656 SOX1O00570 391 aaPredicted RBP17.11■□□□□ 0.33
CNTNAP3-204ENST00000377656 TNFRSF10BO14763 440 aa17.11■□□□□ 0.33
CNTNAP3-204ENST00000377656 PROM1O43490 865 aa17.11■□□□□ 0.33
CNTNAP3-204ENST00000377656 ZNF821O75541 412 aaPredicted RBP17.11■□□□□ 0.33
CNTNAP3-204ENST00000377656 SEMA3DO95025 777 aa17.11■□□□□ 0.33
CNTNAP3-204ENST00000377656 CDRT1O95170 752 aa17.11■□□□□ 0.33
CNTNAP3-204ENST00000377656 KDELR2P33947 212 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms