RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 NR2C1P13056 603 aa21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 KCNC3Q14003 757 aa21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 RAB30Q15771 203 aa21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 ALG10Q5BKT4 473 aa21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 C15orf40Q8WUR7 153 aa21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 KCNJ9Q92806 393 aa21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 S100A16Q96FQ6 103 aaKnown RBP21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 KLHDC7BQ96G42 594 aa21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 NSUN5Q96P11 429 aaKnown RBP21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 LDHAL6BQ9BYZ2 381 aaPredicted RBP21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 EHD1Q9H4M9 534 aa21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 ABCD2Q9UBJ2 740 aa21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 MT-ND5P03915 603 aa21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 DIO3P55073 304 aa21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 DNAJB13P59910 316 aa21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 BEND4Q6ZU67 534 aa21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 FCRL3Q96P31 734 aaPredicted RBP21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 GSKIPQ9P0R6 139 aa21.36■■□□□ 1.01
TM9SF3-201ENST00000371142 OR4K14Q8NGD5 310 aa21.35■■□□□ 1.01
TM9SF3-201ENST00000371142 SLC22A8Q8TCC7 542 aa21.35■■□□□ 1.01
TM9SF3-201ENST00000371142 SCAMP4Q969E2 229 aa21.35■■□□□ 1.01
TM9SF3-201ENST00000371142 GALTP07902 379 aa21.35■■□□□ 1.01
TM9SF3-201ENST00000371142 OR51G2Q8NGK0 314 aa21.35■■□□□ 1.01
TM9SF3-201ENST00000371142 SLC2A4RGQ9NR83 387 aa21.35■■□□□ 1.01
TM9SF3-201ENST00000371142 M0R036 132 aa21.35■■□□□ 1.01
TM9SF3-201ENST00000371142 PLD2O14939 933 aa21.35■■□□□ 1.01
TM9SF3-201ENST00000371142 KLF8O95600 359 aaPredicted RBP21.35■■□□□ 1.01
TM9SF3-201ENST00000371142 SPARCP09486 303 aa21.35■■□□□ 1.01
TM9SF3-201ENST00000371142 STOMP27105 288 aa21.35■■□□□ 1.01
TM9SF3-201ENST00000371142 UGT8Q16880 541 aa21.35■■□□□ 1.01
TM9SF3-201ENST00000371142 IRF7Q92985 503 aa21.35■■□□□ 1.01
TM9SF3-201ENST00000371142 TSPAN6O43657 245 aa21.35■■□□□ 1.01
TM9SF3-201ENST00000371142 F2P00734 622 aa21.35■■□□□ 1.01
TM9SF3-201ENST00000371142 RPL26P61254 145 aaKnown RBP21.35■■□□□ 1.01
TM9SF3-201ENST00000371142 GRK1Q15835 563 aa21.35■■□□□ 1.01
TM9SF3-201ENST00000371142 FAM86B1Q8N7N1 296 aa21.35■■□□□ 1.01
TM9SF3-201ENST00000371142 MGAT4BQ9UQ53 548 aa21.35■■□□□ 1.01
TM9SF3-201ENST00000371142 HOXD13P35453 343 aa21.35■■□□□ 1.01
TM9SF3-201ENST00000371142 SEC14L1Q92503 715 aa21.35■■□□□ 1.01
TM9SF3-201ENST00000371142 NSMAFQ92636 917 aa21.35■■□□□ 1.01
TM9SF3-201ENST00000371142 TMEM125Q96AQ2 219 aa21.35■■□□□ 1.01
TM9SF3-201ENST00000371142 C12orf43Q96C57 262 aaKnown RBP21.35■■□□□ 1.01
TM9SF3-201ENST00000371142 SLC30A2Q9BRI3 323 aa21.35■■□□□ 1.01
TM9SF3-201ENST00000371142 CYP8B1Q9UNU6 501 aa21.35■■□□□ 1.01
TM9SF3-201ENST00000371142 PIRO00625 290 aa21.34■■□□□ 1.01
TM9SF3-201ENST00000371142 TUBA1BP68363 451 aa21.34■■□□□ 1.01
TM9SF3-201ENST00000371142 TUBA4AP68366 448 aa21.34■■□□□ 1.01
TM9SF3-201ENST00000371142 HNRNPA0Q13151 305 aaKnown RBP21.34■■□□□ 1.01
TM9SF3-201ENST00000371142 TUBA1AQ71U36 451 aa21.34■■□□□ 1.01
TM9SF3-201ENST00000371142 NRROSQ86YC3 692 aa21.34■■□□□ 1.01
TM9SF3-201ENST00000371142 GALNT11Q8NCW6 608 aa21.34■■□□□ 1.01
TM9SF3-201ENST00000371142 CASTOR1Q8WTX7 329 aa21.34■■□□□ 1.01
TM9SF3-201ENST00000371142 ZC3H10Q96K80 434 aaKnown RBP21.34■■□□□ 1.01
TM9SF3-201ENST00000371142 PTGES2Q9H7Z7 377 aa21.34■■□□□ 1.01
TM9SF3-201ENST00000371142 PRTFDC1Q9NRG1 225 aa21.34■■□□□ 1.01
TM9SF3-201ENST00000371142 ENAMQ9NRM1 1142 aa21.34■■□□□ 1.01
TM9SF3-201ENST00000371142 PAK4O96013 591 aaPredicted RBP21.34■■□□□ 1.01
TM9SF3-201ENST00000371142 FGF3P11487 239 aaPredicted RBP21.34■■□□□ 1.01
TM9SF3-201ENST00000371142 SOX2P48431 317 aa21.34■■□□□ 1.01
TM9SF3-201ENST00000371142 MECP2P51608 486 aaKnown RBP21.34■■□□□ 1.01
TM9SF3-201ENST00000371142 ZSCAN4Q8NAM6 433 aaPredicted RBP21.34■■□□□ 1.01
TM9SF3-201ENST00000371142 AURKAO14965 403 aa21.34■■□□□ 1.01
TM9SF3-201ENST00000371142 ZNF33AQ06730 810 aa21.34■■□□□ 1.01
TM9SF3-201ENST00000371142 TUBA3EQ6PEY2 450 aa21.34■■□□□ 1.01
TM9SF3-201ENST00000371142 LSM14AQ8ND56 463 aaKnown RBP21.34■■□□□ 1.01
TM9SF3-201ENST00000371142 TAS2R9Q9NYW1 312 aa21.34■■□□□ 1.01
TM9SF3-201ENST00000371142 SH2B3Q9UQQ2 575 aa21.34■■□□□ 1.01
TM9SF3-201ENST00000371142 MAPK3P27361 379 aaPredicted RBP21.33■■□□□ 1.01
TM9SF3-201ENST00000371142 GABRA3P34903 492 aa21.33■■□□□ 1.01
TM9SF3-201ENST00000371142 MAGEA11P43364 429 aa21.33■■□□□ 1.01
TM9SF3-201ENST00000371142 COL9A2Q14055 689 aaPredicted RBP21.33■■□□□ 1.01
TM9SF3-201ENST00000371142 POGLUT1Q8NBL1 392 aa21.33■■□□□ 1.01
TM9SF3-201ENST00000371142 DDX1Q92499 740 aaKnown RBP21.33■■□□□ 1.01
TM9SF3-201ENST00000371142 RBP7Q96R05 134 aa21.33■■□□□ 1.01
TM9SF3-201ENST00000371142 BRF2Q9HAW0 419 aa21.33■■□□□ 1.01
TM9SF3-201ENST00000371142 SHPRHQ149N8 1683 aa21.33■■□□□ 1.01
TM9SF3-201ENST00000371142 TCRBV21S2A2A0A5A6 115 aa21.33■■□□□ 1.01
TM9SF3-201ENST00000371142 DISC1C4P0D8 188 aa21.33■■□□□ 1.01
TM9SF3-201ENST00000371142 NPPAP01160 153 aa21.33■■□□□ 1.01
TM9SF3-201ENST00000371142 YES1P07947 543 aa21.33■■□□□ 1.01
TM9SF3-201ENST00000371142 SHMT2P34897 504 aa21.33■■□□□ 1.01
TM9SF3-201ENST00000371142 LMAN2Q12907 356 aa21.33■■□□□ 1.01
TM9SF3-201ENST00000371142 ZNF805Q5CZA5 627 aa21.33■■□□□ 1.01
TM9SF3-201ENST00000371142 TMEM236Q5W0B7 351 aa21.33■■□□□ 1.01
TM9SF3-201ENST00000371142 NANOGP8Q6NSW7 305 aa21.33■■□□□ 1.01
TM9SF3-201ENST00000371142 NANOGQ9H9S0 305 aa21.33■■□□□ 1.01
TM9SF3-201ENST00000371142 POPDC3Q9HBV1 291 aa21.33■■□□□ 1.01
TM9SF3-201ENST00000371142 MYOM1P52179 1685 aa21.33■■□□□ 1.01
TM9SF3-201ENST00000371142 TRAV6A0A075B6T7 132 aa21.33■■□□□ 1.01
TM9SF3-201ENST00000371142 ABCB7O75027 752 aa21.33■■□□□ 1.01
TM9SF3-201ENST00000371142 IST1P53990 364 aa21.33■■□□□ 1.01
TM9SF3-201ENST00000371142 UPP1Q16831 310 aa21.33■■□□□ 1.01
TM9SF3-201ENST00000371142 ZNF404Q494X3 552 aa21.33■■□□□ 1.01
TM9SF3-201ENST00000371142 CARM1Q86X55 608 aa21.33■■□□□ 1.01
TM9SF3-201ENST00000371142 SLC44A3Q8N4M1 653 aa21.33■■□□□ 1.01
TM9SF3-201ENST00000371142 SLC5A7Q9GZV3 580 aa21.33■■□□□ 1.01
TM9SF3-201ENST00000371142 TAS2R10Q9NYW0 307 aa21.33■■□□□ 1.01
TM9SF3-201ENST00000371142 TMEM5Q9Y2B1 443 aa21.33■■□□□ 1.01
TM9SF3-201ENST00000371142 EXOSC1Q9Y3B2 195 aaKnown RBP21.33■■□□□ 1.01
TM9SF3-201ENST00000371142 FZD9O00144 591 aa21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms