RNA–Protein interactions for RNA: ENST00000359175.8

SPTSSB-201, Transcript of serine palmitoyltransferase small subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSB, Length 3,103 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-201ENST00000359175 GPSM1Q86YR5 675 aa12.77□□□□□ -0.36
SPTSSB-201ENST00000359175 NANOGP1Q8N7R0 232 aa12.77□□□□□ -0.36
SPTSSB-201ENST00000359175 COQ10AQ96MF6 247 aa12.77□□□□□ -0.36
SPTSSB-201ENST00000359175 ZNF436Q9C0F3 470 aaPredicted RBP12.77□□□□□ -0.36
SPTSSB-201ENST00000359175 POLR2J2Q9GZM3 115 aaKnown RBP12.77□□□□□ -0.36
SPTSSB-201ENST00000359175 FZD3Q9NPG1 666 aa12.77□□□□□ -0.36
SPTSSB-201ENST00000359175 CLEC2DQ9UHP7 191 aa12.77□□□□□ -0.36
SPTSSB-201ENST00000359175 ASB4Q9Y574 426 aa12.77□□□□□ -0.36
SPTSSB-201ENST00000359175 YJEFN3A6XGL0 299 aa12.77□□□□□ -0.37
SPTSSB-201ENST00000359175 M0R233 179 aa12.77□□□□□ -0.37
SPTSSB-201ENST00000359175 ADAMDEC1O15204 470 aa12.77□□□□□ -0.37
SPTSSB-201ENST00000359175 PSIP1O75475 530 aaKnown RBP12.77□□□□□ -0.37
SPTSSB-201ENST00000359175 NNMTP40261 264 aa12.77□□□□□ -0.37
SPTSSB-201ENST00000359175 USP39Q53GS9 565 aaKnown RBP12.77□□□□□ -0.37
SPTSSB-201ENST00000359175 C22orf42Q6IC83 251 aa12.77□□□□□ -0.37
SPTSSB-201ENST00000359175 RNF165Q6ZSG1 346 aa12.77□□□□□ -0.37
SPTSSB-201ENST00000359175 STPG2Q8N412 459 aa12.77□□□□□ -0.37
SPTSSB-201ENST00000359175 KCTD7Q96MP8 289 aa12.77□□□□□ -0.37
SPTSSB-201ENST00000359175 BRD7Q9NPI1 651 aa12.77□□□□□ -0.37
SPTSSB-201ENST00000359175 DERAQ9Y315 318 aa12.77□□□□□ -0.37
SPTSSB-201ENST00000359175 SLC28A1O00337 649 aa12.77□□□□□ -0.37
SPTSSB-201ENST00000359175 SNAPINO95295 136 aa12.77□□□□□ -0.37
SPTSSB-201ENST00000359175 SRCP12931 536 aa12.77□□□□□ -0.37
SPTSSB-201ENST00000359175 ARF4P18085 180 aaPredicted RBP12.77□□□□□ -0.37
SPTSSB-201ENST00000359175 DNASE1P24855 282 aa12.77□□□□□ -0.37
SPTSSB-201ENST00000359175 S100A3P33764 101 aa12.77□□□□□ -0.37
SPTSSB-201ENST00000359175 C2orf80Q0P641 193 aa12.77□□□□□ -0.37
SPTSSB-201ENST00000359175 GPR176Q14439 515 aa12.77□□□□□ -0.37
SPTSSB-201ENST00000359175 NCF4Q15080 339 aa12.77□□□□□ -0.37
SPTSSB-201ENST00000359175 PCBP2Q15366 365 aaKnown RBP eCLIP12.77□□□□□ -0.37
SPTSSB-201ENST00000359175 LIPKQ5VXJ0 399 aa12.77□□□□□ -0.37
SPTSSB-201ENST00000359175 ZNF57Q68EA5 555 aaPredicted RBP12.77□□□□□ -0.37
SPTSSB-201ENST00000359175 GOLGA7Q7Z5G4 137 aa12.77□□□□□ -0.37
SPTSSB-201ENST00000359175 ASPGQ86U10 573 aa12.77□□□□□ -0.37
SPTSSB-201ENST00000359175 REPS2Q8NFH8 660 aa12.77□□□□□ -0.37
SPTSSB-201ENST00000359175 PROKR2Q8NFJ6 384 aa12.77□□□□□ -0.37
SPTSSB-201ENST00000359175 MYO19Q96H55 970 aa12.77□□□□□ -0.37
SPTSSB-201ENST00000359175 UROC1Q96N76 676 aa12.77□□□□□ -0.37
SPTSSB-201ENST00000359175 COMMD3Q9UBI1 195 aa12.77□□□□□ -0.37
SPTSSB-201ENST00000359175 ZNF70Q9UC06 446 aaPredicted RBP12.77□□□□□ -0.37
SPTSSB-201ENST00000359175 COL11A1P12107 1806 aaPredicted RBP12.76□□□□□ -0.37
SPTSSB-201ENST00000359175 TRAV20A0A0B4J274 112 aa12.76□□□□□ -0.37
SPTSSB-201ENST00000359175 CXCL3P19876 107 aa12.76□□□□□ -0.37
SPTSSB-201ENST00000359175 DAOAP59103 153 aa12.76□□□□□ -0.37
SPTSSB-201ENST00000359175 PTGES3Q15185 160 aaKnown RBP12.76□□□□□ -0.37
SPTSSB-201ENST00000359175 C3orf38Q5JPI3 329 aa12.76□□□□□ -0.37
SPTSSB-201ENST00000359175 FAM196AQ6ZSG2 479 aa12.76□□□□□ -0.37
SPTSSB-201ENST00000359175 PTCHD4Q6ZW05 846 aa12.76□□□□□ -0.37
SPTSSB-201ENST00000359175 PTOV1Q86YD1 416 aa12.76□□□□□ -0.37
SPTSSB-201ENST00000359175 UXS1Q8NBZ7 420 aa12.76□□□□□ -0.37
SPTSSB-201ENST00000359175 OR4C15Q8NGM1 316 aa12.76□□□□□ -0.37
SPTSSB-201ENST00000359175 ASB12Q8WXK4 309 aa12.76□□□□□ -0.37
SPTSSB-201ENST00000359175 OR2M2Q96R28 347 aa12.76□□□□□ -0.37
SPTSSB-201ENST00000359175 NELL2Q99435 816 aa12.76□□□□□ -0.37
SPTSSB-201ENST00000359175 OSMRQ99650 979 aa12.76□□□□□ -0.37
SPTSSB-201ENST00000359175 SLC29A3Q9BZD2 475 aa12.76□□□□□ -0.37
SPTSSB-201ENST00000359175 GPRC5BQ9NZH0 403 aa12.76□□□□□ -0.37
SPTSSB-201ENST00000359175 HCN3Q9P1Z3 774 aa12.76□□□□□ -0.37
SPTSSB-201ENST00000359175 NYNRINQ9P2P1 1898 aaKnown RBP12.76□□□□□ -0.37
SPTSSB-201ENST00000359175 PLXNA1Q9UIW2 1896 aa12.76□□□□□ -0.37
SPTSSB-201ENST00000359175 PQLC2LA1A4F0 135 aa12.76□□□□□ -0.37
SPTSSB-201ENST00000359175 OTCP00480 354 aa12.76□□□□□ -0.37
SPTSSB-201ENST00000359175 EPOP01588 193 aa12.76□□□□□ -0.37
SPTSSB-201ENST00000359175 CCR1P32246 355 aa12.76□□□□□ -0.37
SPTSSB-201ENST00000359175 EFCAB12Q6NXP0 572 aa12.76□□□□□ -0.37
SPTSSB-201ENST00000359175 MSANTD2Q6P1R3 559 aa12.76□□□□□ -0.37
SPTSSB-201ENST00000359175 ATRAIDQ6UW56 229 aa12.76□□□□□ -0.37
SPTSSB-201ENST00000359175 C17orf107Q6ZR85 190 aa12.76□□□□□ -0.37
SPTSSB-201ENST00000359175 RASSF6Q6ZTQ3 369 aa12.76□□□□□ -0.37
SPTSSB-201ENST00000359175 TSEN54Q7Z6J9 526 aaKnown RBP12.76□□□□□ -0.37
SPTSSB-201ENST00000359175 OR4D10Q8NGI6 311 aa12.76□□□□□ -0.37
SPTSSB-201ENST00000359175 OR4L1Q8NH43 312 aa12.76□□□□□ -0.37
SPTSSB-201ENST00000359175 TPD52L3Q96J77 140 aa12.76□□□□□ -0.37
SPTSSB-201ENST00000359175 MAPKAP1Q9BPZ7 522 aa12.76□□□□□ -0.37
SPTSSB-201ENST00000359175 ULBP1Q9BZM6 244 aa12.76□□□□□ -0.37
SPTSSB-201ENST00000359175 OR51J1Q9H342 316 aa12.76□□□□□ -0.37
SPTSSB-201ENST00000359175 DCAF16Q9NXF7 216 aa12.76□□□□□ -0.37
SPTSSB-201ENST00000359175 MPP6Q9NZW5 540 aa12.76□□□□□ -0.37
SPTSSB-201ENST00000359175 MALT1Q9UDY8 824 aa12.76□□□□□ -0.37
SPTSSB-201ENST00000359175 DPP7Q9UHL4 492 aa12.76□□□□□ -0.37
SPTSSB-201ENST00000359175 LCTP09848 1927 aa12.76□□□□□ -0.37
SPTSSB-201ENST00000359175 BTAF1O14981 1849 aa12.76□□□□□ -0.37
SPTSSB-201ENST00000359175 MEIKINA0A087WXM9 373 aa12.75□□□□□ -0.37
SPTSSB-201ENST00000359175 HPGDSO60760 199 aa12.75□□□□□ -0.37
SPTSSB-201ENST00000359175 OAZ1P54368 228 aa12.75□□□□□ -0.37
SPTSSB-201ENST00000359175 VEZF1Q14119 521 aa12.75□□□□□ -0.37
SPTSSB-201ENST00000359175 TEAD4Q15561 434 aa12.75□□□□□ -0.37
SPTSSB-201ENST00000359175 SIRPB2Q5JXA9 342 aa12.75□□□□□ -0.37
SPTSSB-201ENST00000359175 ANKRD46Q86W74 232 aa12.75□□□□□ -0.37
SPTSSB-201ENST00000359175 OTUB1Q96FW1 271 aaPredicted RBP12.75□□□□□ -0.37
SPTSSB-201ENST00000359175 ERMAPQ96PL5 475 aaPredicted RBP12.75□□□□□ -0.37
SPTSSB-201ENST00000359175 FAM193BQ96PV7 902 aaPredicted RBP12.75□□□□□ -0.37
SPTSSB-201ENST00000359175 GPR21Q99679 349 aa12.75□□□□□ -0.37
SPTSSB-201ENST00000359175 CD93Q9NPY3 652 aa12.75□□□□□ -0.37
SPTSSB-201ENST00000359175 SPATA6Q9NWH7 488 aaPredicted RBP12.75□□□□□ -0.37
SPTSSB-201ENST00000359175 EMC3Q9P0I2 261 aa12.75□□□□□ -0.37
SPTSSB-201ENST00000359175 SCP2D1Q9UJQ7 156 aa12.75□□□□□ -0.37
SPTSSB-201ENST00000359175 TRAV6A0A075B6T7 132 aa12.75□□□□□ -0.37
SPTSSB-201ENST00000359175 SELENOFO60613 162 aa12.75□□□□□ -0.37
SPTSSB-201ENST00000359175 RPP40O75818 363 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms