RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 RNASEH2BQ5TBB1 312 aaKnown RBP13.24□□□□□ -0.29
COMMD4-202ENST00000338995 NDUFAF5Q5TEU4 345 aa13.24□□□□□ -0.29
COMMD4-202ENST00000338995 TMIGD1Q6UXZ0 262 aa13.24□□□□□ -0.29
COMMD4-202ENST00000338995 PDIK1LQ8N165 341 aa13.24□□□□□ -0.29
COMMD4-202ENST00000338995 ANKRD53Q8N9V6 530 aa13.24□□□□□ -0.29
COMMD4-202ENST00000338995 PSD4Q8NDX1 1056 aa13.24□□□□□ -0.29
COMMD4-202ENST00000338995 OR5M3Q8NGP4 307 aa13.24□□□□□ -0.29
COMMD4-202ENST00000338995 OR10Q1Q8NGQ4 319 aa13.24□□□□□ -0.29
COMMD4-202ENST00000338995 CCT6BQ92526 530 aa13.24□□□□□ -0.29
COMMD4-202ENST00000338995 DAZLQ92904 295 aaKnown RBP13.24□□□□□ -0.29
COMMD4-202ENST00000338995 NCLNQ969V3 563 aa13.24□□□□□ -0.29
COMMD4-202ENST00000338995 PITHD1Q9GZP4 211 aaPredicted RBP13.24□□□□□ -0.29
COMMD4-202ENST00000338995 ADAP2Q9NPF8 381 aa13.24□□□□□ -0.29
COMMD4-202ENST00000338995 PLSCR2Q9NRY7 297 aa13.24□□□□□ -0.29
COMMD4-202ENST00000338995 KCMF1Q9P0J7 381 aa13.24□□□□□ -0.29
COMMD4-202ENST00000338995 EDARQ9UNE0 448 aa13.24□□□□□ -0.29
COMMD4-202ENST00000338995 FBN2P35556 2912 aa13.24□□□□□ -0.29
COMMD4-202ENST00000338995 ANKRD17O75179 2603 aaKnown RBP13.23□□□□□ -0.29
COMMD4-202ENST00000338995 INTS1Q8N201 2190 aaKnown RBP13.23□□□□□ -0.29
COMMD4-202ENST00000338995 OR14I1A6ND48 311 aa13.23□□□□□ -0.29
COMMD4-202ENST00000338995 FAM90A27PA6NNH2 459 aa13.23□□□□□ -0.29
COMMD4-202ENST00000338995 BCKDKO14874 412 aa13.23□□□□□ -0.29
COMMD4-202ENST00000338995 TOXO94900 526 aa13.23□□□□□ -0.29
COMMD4-202ENST00000338995 HOXD4P09016 255 aaPredicted RBP13.23□□□□□ -0.29
COMMD4-202ENST00000338995 TNNI3P19429 210 aa13.23□□□□□ -0.29
COMMD4-202ENST00000338995 RAB38P57729 211 aa13.23□□□□□ -0.29
COMMD4-202ENST00000338995 EFTUD2Q15029 972 aaKnown RBP eCLIP13.23□□□□□ -0.291e-7■■■■■ 52.3
COMMD4-202ENST00000338995 GXYLT1Q4G148 440 aa13.23□□□□□ -0.29
COMMD4-202ENST00000338995 IL20RBQ6UXL0 311 aa13.23□□□□□ -0.29
COMMD4-202ENST00000338995 HSDL2Q6YN16 418 aa13.23□□□□□ -0.29
COMMD4-202ENST00000338995 GK5Q6ZS86 529 aa13.23□□□□□ -0.29
COMMD4-202ENST00000338995 FRA10AC1Q70Z53 315 aa13.23□□□□□ -0.29
COMMD4-202ENST00000338995 MDGA2Q7Z553 956 aa13.23□□□□□ -0.29
COMMD4-202ENST00000338995 TMEM200AQ86VY9 491 aa13.23□□□□□ -0.29
COMMD4-202ENST00000338995 DMRTC2Q8IXT2 367 aaPredicted RBP13.23□□□□□ -0.29
COMMD4-202ENST00000338995 KLHDC8AQ8IYD2 350 aa13.23□□□□□ -0.29
COMMD4-202ENST00000338995 OR52N2Q8NGI0 321 aa13.23□□□□□ -0.29
COMMD4-202ENST00000338995 OR5L2Q8NGL0 311 aa13.23□□□□□ -0.29
COMMD4-202ENST00000338995 ACTRT1Q8TDG2 376 aa13.23□□□□□ -0.29
COMMD4-202ENST00000338995 KIAA1191Q96A73 305 aa13.23□□□□□ -0.29
COMMD4-202ENST00000338995 VPS39Q96JC1 886 aa13.23□□□□□ -0.29
COMMD4-202ENST00000338995 SGCZQ96LD1 299 aa13.23□□□□□ -0.29
COMMD4-202ENST00000338995 UCK2Q9BZX2 261 aa13.23□□□□□ -0.29
COMMD4-202ENST00000338995 SPNS1Q9H2V7 528 aa13.23□□□□□ -0.29
COMMD4-202ENST00000338995 PRM3Q9NNZ6 103 aa13.23□□□□□ -0.29
COMMD4-202ENST00000338995 MYOTQ9UBF9 498 aa13.23□□□□□ -0.29
COMMD4-202ENST00000338995 NKX2-6A6NCS4 301 aa13.22□□□□□ -0.29
COMMD4-202ENST00000338995 FIGNL2A6NMB9 653 aa13.22□□□□□ -0.29
COMMD4-202ENST00000338995 FAM47E-STBD1D6RA91 191 aa13.22□□□□□ -0.29
COMMD4-202ENST00000338995 NPIPA2E9PIF3 369 aa13.22□□□□□ -0.29
COMMD4-202ENST00000338995 NPIPA3F8WFD2 350 aa13.22□□□□□ -0.29
COMMD4-202ENST00000338995 DNALI1O14645 258 aaPredicted RBP13.22□□□□□ -0.29
COMMD4-202ENST00000338995 ERI3O43414 337 aaKnown RBP13.22□□□□□ -0.29
COMMD4-202ENST00000338995 CTNSO60931 367 aa13.22□□□□□ -0.29
COMMD4-202ENST00000338995 CLEC3AO75596 197 aa13.22□□□□□ -0.29
COMMD4-202ENST00000338995 OR2J2O76002 312 aa13.22□□□□□ -0.29
COMMD4-202ENST00000338995 ZWINTO95229 277 aa13.22□□□□□ -0.29
COMMD4-202ENST00000338995 CNR1P21554 472 aa13.22□□□□□ -0.29
COMMD4-202ENST00000338995 CCZ1BP86790 482 aa13.22□□□□□ -0.29
COMMD4-202ENST00000338995 CCZ1P86791 482 aaPredicted RBP13.22□□□□□ -0.29
COMMD4-202ENST00000338995 STX4Q12846 297 aa13.22□□□□□ -0.29
COMMD4-202ENST00000338995 MYBPHQ13203 477 aa13.22□□□□□ -0.29
COMMD4-202ENST00000338995 ELAVL1Q15717 326 aaKnown RBP13.22□□□□□ -0.29
COMMD4-202ENST00000338995 TRIM40Q6P9F5 258 aa13.22□□□□□ -0.29
COMMD4-202ENST00000338995 SBSNQ6UWP8 590 aa13.22□□□□□ -0.29
COMMD4-202ENST00000338995 LRRC8AQ8IWT6 810 aa13.22□□□□□ -0.29
COMMD4-202ENST00000338995 SCUBE1Q8IWY4 988 aa13.22□□□□□ -0.29
COMMD4-202ENST00000338995 MORN4Q8NDC4 146 aa13.22□□□□□ -0.29
COMMD4-202ENST00000338995 LRRC39Q96DD0 335 aa13.22□□□□□ -0.29
COMMD4-202ENST00000338995 SERINC2Q96SA4 455 aa13.22□□□□□ -0.29
COMMD4-202ENST00000338995 FAM173AQ9BQD7 235 aa13.22□□□□□ -0.29
COMMD4-202ENST00000338995 ROGDIQ9GZN7 287 aa13.22□□□□□ -0.29
COMMD4-202ENST00000338995 NT5DC2Q9H857 520 aa13.22□□□□□ -0.29
COMMD4-202ENST00000338995 COPS7BQ9H9Q2 264 aaPredicted RBP13.22□□□□□ -0.29
COMMD4-202ENST00000338995 TNFRSF10DQ9UBN6 386 aa13.22□□□□□ -0.29
COMMD4-202ENST00000338995 CTNNAL1Q9UBT7 734 aa13.22□□□□□ -0.29
COMMD4-202ENST00000338995 PPP2R2CQ9Y2T4 447 aa13.22□□□□□ -0.29
COMMD4-202ENST00000338995 HRH3Q9Y5N1 445 aa13.22□□□□□ -0.29
COMMD4-202ENST00000338995 SPACA6W5XKT8 324 aa13.22□□□□□ -0.29
COMMD4-202ENST00000338995 DCHS2Q6V1P9 2916 aa13.22□□□□□ -0.29
COMMD4-202ENST00000338995 ADGRG4Q8IZF6 3080 aa13.21□□□□□ -0.29
COMMD4-202ENST00000338995 LRIT2A6NDA9 550 aa13.21□□□□□ -0.29
COMMD4-202ENST00000338995 CLGNO14967 610 aa13.21□□□□□ -0.29
COMMD4-202ENST00000338995 WDR47O94967 919 aa13.21□□□□□ -0.29
COMMD4-202ENST00000338995 IGFBP2P18065 325 aa13.21□□□□□ -0.29
COMMD4-202ENST00000338995 ACVR2AP27037 513 aa13.21□□□□□ -0.29
COMMD4-202ENST00000338995 MSX1P28360 303 aa13.21□□□□□ -0.29
COMMD4-202ENST00000338995 ZFP36L2P47974 494 aaKnown RBP13.21□□□□□ -0.29
COMMD4-202ENST00000338995 GPR143P51810 404 aa13.21□□□□□ -0.29
COMMD4-202ENST00000338995 ART1P52961 327 aa13.21□□□□□ -0.29
COMMD4-202ENST00000338995 PLA2G16P53816 162 aa13.21□□□□□ -0.29
COMMD4-202ENST00000338995 SLC12A2P55011 1212 aa13.21□□□□□ -0.29
COMMD4-202ENST00000338995 MTTPP55157 894 aa13.21□□□□□ -0.29
COMMD4-202ENST00000338995 RUNX2Q13950 521 aa13.21□□□□□ -0.29
COMMD4-202ENST00000338995 SERTAD2Q14140 314 aa13.21□□□□□ -0.29
COMMD4-202ENST00000338995 SLC10A1Q14973 349 aa13.21□□□□□ -0.29
COMMD4-202ENST00000338995 HIST2H2ACQ16777 129 aaPredicted RBP13.21□□□□□ -0.29
COMMD4-202ENST00000338995 HIST2H2AA3Q6FI13 130 aa13.21□□□□□ -0.29
COMMD4-202ENST00000338995 ZNF585AQ6P3V2 769 aa13.21□□□□□ -0.29
COMMD4-202ENST00000338995 OPN5Q6U736 354 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms