RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 ABCD2Q9UBJ2 740 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 VPS29Q9UBQ0 182 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 ACSL6Q9UKU0 697 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 PCDHB8Q9UN66 801 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 DERAQ9Y315 318 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 DAPL1A0PJW8 107 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 ARHGAP33O14559 1287 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 GNB5O14775 395 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 MTX2O75431 263 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 LHCGRP22888 699 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 CDH11P55287 796 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 SLC35A2P78381 396 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 PCBP2Q15366 365 aaKnown RBP eCLIP12.76□□□□□ -0.37
COL2A1-201ENST00000337299 TBCEQ15813 527 aaPredicted RBP12.76□□□□□ -0.37
COL2A1-201ENST00000337299 RAB12Q6IQ22 244 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 BPHLQ86WA6 291 aaPredicted RBP12.76□□□□□ -0.37
COL2A1-201ENST00000337299 DNAJB8Q8NHS0 232 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 OR6C74A6NCV1 312 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 MAFKO60675 156 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 HPGDSO60760 199 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 RETP07949 1114 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 FDXRP22570 491 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 CRISP1P54107 249 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 RPS24P62847 133 aaKnown RBP12.76□□□□□ -0.37
COL2A1-201ENST00000337299 ZNF234Q14588 700 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 GRIN2CQ14957 1233 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 PTCHD3Q3KNS1 767 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 RANBP10Q6VN20 620 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 SLC46A3Q7Z3Q1 461 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 TANKQ92844 425 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 RIPOR3Q96MK2 946 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 ZDHHC6Q9H6R6 413 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 GJD2Q9UKL4 321 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 PCDHGB2Q9Y5G2 931 aa12.76□□□□□ -0.37
COL2A1-201ENST00000337299 A0A0G2JN53 185 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 PCDHGA12O60330 932 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 TGFB1P01137 390 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 EPHA2P29317 976 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 ATP5C1P36542 298 aaKnown RBP12.75□□□□□ -0.37
COL2A1-201ENST00000337299 VLDLRP98155 873 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 IL10RBQ08334 325 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 PARP15Q460N3 678 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 PSAPL1Q6NUJ1 521 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 RNF44Q7L0R7 432 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 LRR1Q96L50 414 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 MBOAT4Q96T53 435 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 TM9SF2Q99805 663 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 DOHHQ9BU89 302 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 TUBB1Q9H4B7 451 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 MAGIXQ9H6Y5 334 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 PDLIM7Q9NR12 457 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 AKAP7Q9P0M2 348 aaPredicted RBP12.75□□□□□ -0.37
COL2A1-201ENST00000337299 IRGMA1A4Y4 181 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 PCDH7O60245 1069 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 CLEC2LP0C7M8 214 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 PIK3CBP42338 1070 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 CXCR4P61073 352 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 SNTB2Q13425 540 aaKnown RBP12.75□□□□□ -0.37
COL2A1-201ENST00000337299 TUSC3Q13454 348 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 MBTPS1Q14703 1052 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 ZMAT1Q5H9K5 638 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 FBXL22Q6P050 247 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 ZCCHC12Q6PEW1 402 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 NCEH1Q6PIU2 408 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 CERS6Q6ZMG9 384 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 KLHL36Q8N4N3 616 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 EGLN2Q96KS0 407 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 C17orf62Q9BQA9 187 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 ZNF282Q9UDV7 671 aaPredicted RBP12.75□□□□□ -0.37
COL2A1-201ENST00000337299 GPR52Q9Y2T5 361 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 SLC9A3R1O14745 358 aaPredicted RBP12.75□□□□□ -0.37
COL2A1-201ENST00000337299 ARPC5O15511 151 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 RP2O75695 350 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 ALDOBP05062 364 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 CSN2P05814 226 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 SAGP10523 405 aaPredicted RBP12.75□□□□□ -0.37
COL2A1-201ENST00000337299 RAB3BP20337 219 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 CBLP22681 906 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 TGM4P49221 684 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 TAF1AQ15573 450 aaPredicted RBP12.75□□□□□ -0.37
COL2A1-201ENST00000337299 DPY19L1Q2PZI1 675 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 DEFB115Q30KQ5 88 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 PYCR3Q53H96 274 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 FAM180BQ6P0A1 224 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 B3GLCTQ6Y288 498 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 MFSD6LQ8IWD5 586 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 AP2M1Q96CW1 435 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 SORBS1Q9BX66 1292 aaKnown RBP12.75□□□□□ -0.37
COL2A1-201ENST00000337299 RC3H2Q9HBD1 1191 aaKnown RBP12.75□□□□□ -0.37
COL2A1-201ENST00000337299 PRDM9Q9NQV7 894 aa12.75□□□□□ -0.37
COL2A1-201ENST00000337299 FCF1Q9Y324 198 aaKnown RBP12.75□□□□□ -0.37
COL2A1-201ENST00000337299 B3GALNT1O75752 331 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 PDYNP01213 254 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 H2AFB2P0C5Z0 115 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 ETFAP13804 333 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 SERPINA4P29622 427 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 ARHGDIBP52566 201 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 CEBPGP53567 150 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 ERVFC1P60507 584 aa12.74□□□□□ -0.37
COL2A1-201ENST00000337299 FCN2Q15485 313 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms