RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 GAB1Q13480 694 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 CDKN3Q16667 212 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 ANXA8L1Q5VT79 327 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 NLGN4XQ8N0W4 816 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 UBE2J2Q8N2K1 259 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 KCNS3Q9BQ31 491 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 SLC35A5Q9BS91 424 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 VN1R3Q9BXE9 311 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 TMEM121BQ9BXQ6 578 aaPredicted RBP15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 SLIRPQ9GZT3 109 aaKnown RBP15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 MTG2Q9H4K7 406 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 TMEM184CQ9NVA4 438 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 OR2A25A4D2G3 310 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 SCAMP2O15127 329 aaKnown RBP15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 KPNA5O15131 536 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 CYP7B1O75881 506 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 C1SP09871 688 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 HLA-FP30511 346 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 SLC6A12P48065 614 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 EXOC3L2Q2M3D2 409 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 IFI44LQ53G44 452 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 SPANXN2Q5MJ10 180 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 COX20Q5RI15 118 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 LIPJQ5W064 366 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 TPGS2Q68CL5 300 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 ZNF852Q6ZMS4 543 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 CDH24Q86UP0 819 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 AMIGO1Q86WK6 493 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 OR6F1Q8NGZ6 308 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 IL4I1Q96RQ9 567 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 ATP13A2Q9NQ11 1180 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 ERVW-1Q9UQF0 538 aa15.85■□□□□ 0.13
CDC42EP4-201ENST00000335793 KCNE1BA0A087WTH5 132 aa15.84■□□□□ 0.13
CDC42EP4-201ENST00000335793 APOA1P02647 267 aa15.84■□□□□ 0.13
CDC42EP4-201ENST00000335793 ASMTP46597 345 aa15.84■□□□□ 0.13
CDC42EP4-201ENST00000335793 GGTA1PQ4G0N0 100 aa15.84■□□□□ 0.13
CDC42EP4-201ENST00000335793 PLPP6Q8IY26 295 aa15.84■□□□□ 0.13
CDC42EP4-201ENST00000335793 FBXL6Q8N531 539 aa15.84■□□□□ 0.13
CDC42EP4-201ENST00000335793 OR7G3Q8NG95 312 aa15.84■□□□□ 0.13
CDC42EP4-201ENST00000335793 SORCS1Q8WY21 1168 aa15.84■□□□□ 0.13
CDC42EP4-201ENST00000335793 MS4A12Q9NXJ0 267 aa15.84■□□□□ 0.13
CDC42EP4-201ENST00000335793 GFRA2O00451 464 aa15.84■□□□□ 0.13
CDC42EP4-201ENST00000335793 NAGAP17050 411 aa15.84■□□□□ 0.13
CDC42EP4-201ENST00000335793 DBPQ10586 325 aaPredicted RBP15.84■□□□□ 0.13
CDC42EP4-201ENST00000335793 SCARB2Q14108 478 aa15.84■□□□□ 0.13
CDC42EP4-201ENST00000335793 PTCHD4Q6ZW05 846 aa15.84■□□□□ 0.13
CDC42EP4-201ENST00000335793 TMEM150AQ86TG1 271 aa15.84■□□□□ 0.13
CDC42EP4-201ENST00000335793 ADAMTS19Q8TE59 1207 aa15.84■□□□□ 0.13
CDC42EP4-201ENST00000335793 ST8SIA2Q92186 375 aa15.84■□□□□ 0.13
CDC42EP4-201ENST00000335793 GGHQ92820 318 aa15.84■□□□□ 0.13
CDC42EP4-201ENST00000335793 NIPSNAP1Q9BPW8 284 aa15.84■□□□□ 0.13
CDC42EP4-201ENST00000335793 MIEF1Q9NQG6 463 aa15.84■□□□□ 0.13
CDC42EP4-201ENST00000335793 OR7A10O76100 309 aa15.83■□□□□ 0.13
CDC42EP4-201ENST00000335793 PSKH1P11801 424 aa15.83■□□□□ 0.13
CDC42EP4-201ENST00000335793 SLC19A1P41440 591 aa15.83■□□□□ 0.13
CDC42EP4-201ENST00000335793 ALDH9A1P49189 494 aa15.83■□□□□ 0.13
CDC42EP4-201ENST00000335793 VEZF1Q14119 521 aa15.83■□□□□ 0.13
CDC42EP4-201ENST00000335793 TEAD4Q15561 434 aa15.83■□□□□ 0.13
CDC42EP4-201ENST00000335793 PLEKHS1Q5SXH7 462 aa15.83■□□□□ 0.13
CDC42EP4-201ENST00000335793 GDPD3Q7L5L3 318 aa15.83■□□□□ 0.13
CDC42EP4-201ENST00000335793 TRMT11Q7Z4G4 463 aaKnown RBP15.83■□□□□ 0.13
CDC42EP4-201ENST00000335793 OR8J2Q8NGG1 315 aa15.83■□□□□ 0.13
CDC42EP4-201ENST00000335793 PPCDCQ96CD2 204 aa15.83■□□□□ 0.13
CDC42EP4-201ENST00000335793 BCL7BQ9BQE9 202 aa15.83■□□□□ 0.13
CDC42EP4-201ENST00000335793 MMP27Q9H306 513 aa15.83■□□□□ 0.13
CDC42EP4-201ENST00000335793 FBXO8Q9NRD0 319 aa15.83■□□□□ 0.13
CDC42EP4-201ENST00000335793 ATPIF1Q9UII2 106 aa15.83■□□□□ 0.13
CDC42EP4-201ENST00000335793 HCN4Q9Y3Q4 1203 aa15.83■□□□□ 0.13
CDC42EP4-201ENST00000335793 MYOFQ9NZM1 2061 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 PLXNA3P51805 1871 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 PRR23AA6NEV1 266 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 CLCA1A8K7I4 914 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 H3BN98 237 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 NOS1APO75052 506 aaPredicted RBP15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 UPK1BO75841 260 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 ABLIM3O94929 683 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 SOD2P04179 222 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 HLA-EP13747 358 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 PPIBP23284 216 aaKnown RBP15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 PTPN5P54829 565 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 SELENOWP63302 87 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 HBA1P69905 142 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 KCNJ10P78508 379 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 GCNT6Q5T4J0 391 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 SYCE2Q6PIF2 218 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 TMEM220Q6QAJ8 160 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 GDPD4Q6W3E5 623 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 OTOP2Q7RTS6 562 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 HSD11B1LQ7Z5J1 315 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 CYB5D2Q8WUJ1 264 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 CIDECQ96AQ7 238 aaPredicted RBP15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 HRASLS5Q96KN8 279 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 GABARAPL1Q9H0R8 117 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 RANGRFQ9HD47 186 aaPredicted RBP15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 SPG21Q9NZD8 308 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 GBF1Q92538 1859 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 C5orf58C9J3I9 102 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 PRMT3O60678 531 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 SCN2BO60939 215 aa15.83■□□□□ 0.12
CDC42EP4-201ENST00000335793 ZNF821O75541 412 aaPredicted RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms