RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 SNTA1Q13424 505 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 DAZAP2Q15038 168 aaPredicted RBP5.95□□□□□ -1.46
USP16-201ENST00000334352 PPP1R7Q15435 360 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 C1QTNF12Q5T7M4 302 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 OPN5Q6U736 354 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 CES3Q6UWW8 571 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 TMIGD1Q6UXZ0 262 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 UBE3DQ7Z6J8 389 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 PRR7Q8TB68 274 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 PAQR8Q8TEZ7 354 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 MARVELD3Q96A59 401 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 MS4A14Q96JA4 679 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 ZFP3Q96NJ6 502 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 NTMT1Q9BV86 223 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 NECTIN3Q9NQS3 549 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 B4GALT7Q9UBV7 327 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 ZNF639Q9UID6 485 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 IKZF3Q9UKT9 509 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 CSAG2Q9Y5P2 127 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 TTC36A6NLP5 189 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 SGK494L7N484 410 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 NRP2O60462 931 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 SLC19A2O60779 497 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 RDH16O75452 317 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 SSR4P51571 173 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 ITGA8P53708 1063 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 LIM2P55344 173 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 RAB10P61026 200 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 RPP38P78345 283 aaKnown RBP5.95□□□□□ -1.46
USP16-201ENST00000334352 ACTN3Q08043 901 aaPredicted RBP5.95□□□□□ -1.46
USP16-201ENST00000334352 RUNX2Q13950 521 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 SETDB1Q15047 1291 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 ACAP2Q15057 778 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 TGFBIQ15582 683 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 CEBPEQ15744 281 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 HIST2H2ACQ16777 129 aaPredicted RBP5.95□□□□□ -1.46
USP16-201ENST00000334352 EIF2S3LQ2VIR3 472 aaKnown RBP5.95□□□□□ -1.46
USP16-201ENST00000334352 TOR1AIP1Q5JTV8 583 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 FAM69BQ5VUD6 431 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 HIST2H2AA3Q6FI13 130 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 OTUD6BQ8N6M0 293 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 STAG3L4Q8TBR4 150 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 ZNF721Q8TF20 911 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 ZNF473Q8WTR7 871 aaKnown RBP5.95□□□□□ -1.46
USP16-201ENST00000334352 ANKRD9Q96BM1 317 aaPredicted RBP5.95□□□□□ -1.46
USP16-201ENST00000334352 TMEM41AQ96HV5 264 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 SIGLEC12Q96PQ1 595 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 CCDC77Q9BR77 488 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 OR10A4Q9H209 315 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 KCNF1Q9H3M0 494 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 BRF2Q9HAW0 419 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 JKAMPQ9P055 326 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 PTGFRNQ9P2B2 879 aa5.95□□□□□ -1.46
USP16-201ENST00000334352 A0A0A6YYD5 115 aa5.94□□□□□ -1.46
USP16-201ENST00000334352 CAPN14A8MX76 684 aa5.94□□□□□ -1.46
USP16-201ENST00000334352 OR1F1O43749 312 aa5.94□□□□□ -1.46
USP16-201ENST00000334352 CLPSP04118 112 aa5.94□□□□□ -1.46
USP16-201ENST00000334352 GABRA1P14867 456 aa5.94□□□□□ -1.46
USP16-201ENST00000334352 EEF1DP29692 281 aaKnown RBP5.94□□□□□ -1.46
USP16-201ENST00000334352 LCN1P31025 176 aa5.94□□□□□ -1.46
USP16-201ENST00000334352 ALDH18A1P54886 795 aaKnown RBP5.94□□□□□ -1.46
USP16-201ENST00000334352 PHEXP78562 749 aa5.94□□□□□ -1.46
USP16-201ENST00000334352 PDK4Q16654 411 aa5.94□□□□□ -1.46
USP16-201ENST00000334352 BTBD16Q32M84 506 aa5.94□□□□□ -1.46
USP16-201ENST00000334352 GLE1Q53GS7 698 aaKnown RBP5.94□□□□□ -1.46
USP16-201ENST00000334352 ADGRD1Q6QNK2 874 aa5.94□□□□□ -1.46
USP16-201ENST00000334352 DOLPP1Q86YN1 238 aa5.94□□□□□ -1.46
USP16-201ENST00000334352 TMEM151BQ8IW70 566 aa5.94□□□□□ -1.46
USP16-201ENST00000334352 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.94□□□□□ -1.46
USP16-201ENST00000334352 ZNF295-AS1Q8N0V1 137 aa5.94□□□□□ -1.46
USP16-201ENST00000334352 TMEM156Q8N614 296 aa5.94□□□□□ -1.46
USP16-201ENST00000334352 SPC24Q8NBT2 197 aa5.94□□□□□ -1.46
USP16-201ENST00000334352 KCT2Q8NC54 265 aa5.94□□□□□ -1.46
USP16-201ENST00000334352 FAM76AQ8TAV0 307 aa5.94□□□□□ -1.46
USP16-201ENST00000334352 HOXB13Q92826 284 aaPredicted RBP5.94□□□□□ -1.46
USP16-201ENST00000334352 MAGED4Q96JG8 741 aa5.94□□□□□ -1.46
USP16-201ENST00000334352 RAB17Q9H0T7 212 aa5.94□□□□□ -1.46
USP16-201ENST00000334352 MCCC2Q9HCC0 563 aa5.94□□□□□ -1.46
USP16-201ENST00000334352 PRTFDC1Q9NRG1 225 aa5.94□□□□□ -1.46
USP16-201ENST00000334352 PHF3Q92576 2039 aaKnown RBP5.94□□□□□ -1.46
USP16-201ENST00000334352 ZNF462Q96JM2 2506 aa5.94□□□□□ -1.46
USP16-201ENST00000334352 KIAA1549Q9HCM3 1950 aa5.94□□□□□ -1.46
USP16-201ENST00000334352 NDUFS4O43181 175 aa5.94□□□□□ -1.46
USP16-201ENST00000334352 PROM1O43490 865 aa5.94□□□□□ -1.46
USP16-201ENST00000334352 TRIM3O75382 744 aaPredicted RBP5.94□□□□□ -1.46
USP16-201ENST00000334352 STK16O75716 305 aa5.94□□□□□ -1.46
USP16-201ENST00000334352 HPNP05981 417 aa5.94□□□□□ -1.46
USP16-201ENST00000334352 ABHD2P08910 425 aa5.94□□□□□ -1.46
USP16-201ENST00000334352 PAX1P15863 534 aa5.94□□□□□ -1.46
USP16-201ENST00000334352 ATP5A1P25705 553 aaKnown RBP5.94□□□□□ -1.46
USP16-201ENST00000334352 PTX3P26022 381 aaPredicted RBP5.94□□□□□ -1.46
USP16-201ENST00000334352 CHRNB4P30926 498 aa5.94□□□□□ -1.46
USP16-201ENST00000334352 OPRM1P35372 400 aa5.94□□□□□ -1.46
USP16-201ENST00000334352 PAFAH1B1P43034 410 aa5.94□□□□□ -1.46
USP16-201ENST00000334352 TAS2R39P59534 338 aa5.94□□□□□ -1.46
USP16-201ENST00000334352 DCAF7P61962 342 aa5.94□□□□□ -1.46
USP16-201ENST00000334352 YBX1P67809 324 aaKnown RBP5.94□□□□□ -1.46
USP16-201ENST00000334352 SORDQ00796 357 aa5.94□□□□□ -1.46
USP16-201ENST00000334352 IFT88Q13099 833 aa5.94□□□□□ -1.46
USP16-201ENST00000334352 RASA2Q15283 850 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms