RNA–Protein interactions for RNA: ENST00000332797.10

CCDC28A-201, Transcript of coiled-coil domain containing 28A, humanhuman

TSL 1 (best) BASIC

Gene CCDC28A, Length 1,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-201ENST00000332797 TBC1D20Q96BZ9 403 aa15□□□□□ -0.01
CCDC28A-201ENST00000332797 PKNOX2Q96KN3 472 aa15□□□□□ -0.01
CCDC28A-201ENST00000332797 IP6K3Q96PC2 410 aa15□□□□□ -0.01
CCDC28A-201ENST00000332797 HBEGFQ99075 208 aa15□□□□□ -0.01
CCDC28A-201ENST00000332797 SERPINI1Q99574 410 aa15□□□□□ -0.01
CCDC28A-201ENST00000332797 ARHGAP9Q9BRR9 750 aa15□□□□□ -0.01
CCDC28A-201ENST00000332797 NPLQ9BXD5 320 aaPredicted RBP15□□□□□ -0.01
CCDC28A-201ENST00000332797 VN1R1Q9GZP7 353 aa15□□□□□ -0.01
CCDC28A-201ENST00000332797 HS3ST3B1Q9Y662 390 aa15□□□□□ -0.01
CCDC28A-201ENST00000332797 KCNMB2Q9Y691 235 aa15□□□□□ -0.01
CCDC28A-201ENST00000332797 NUP210LQ5VU65 1888 aa14.99□□□□□ -0.01
CCDC28A-201ENST00000332797 PCSK5Q92824 1860 aa14.99□□□□□ -0.01
CCDC28A-201ENST00000332797 OR2W5A6NFC9 320 aa14.99□□□□□ -0.01
CCDC28A-201ENST00000332797 SOCS6O14544 535 aa14.99□□□□□ -0.01
CCDC28A-201ENST00000332797 B4GALT2O60909 372 aa14.99□□□□□ -0.01
CCDC28A-201ENST00000332797 HIST1H1TP22492 207 aaPredicted RBP14.99□□□□□ -0.01
CCDC28A-201ENST00000332797 JAK1P23458 1154 aa14.99□□□□□ -0.01
CCDC28A-201ENST00000332797 ATP5A1P25705 553 aaKnown RBP14.99□□□□□ -0.01
CCDC28A-201ENST00000332797 SERPINB4P48594 390 aa14.99□□□□□ -0.01
CCDC28A-201ENST00000332797 EFNA3P52797 238 aa14.99□□□□□ -0.01
CCDC28A-201ENST00000332797 CHAF1BQ13112 559 aa14.99□□□□□ -0.01
CCDC28A-201ENST00000332797 CUL3Q13618 768 aa14.99□□□□□ -0.01
CCDC28A-201ENST00000332797 MPP2Q14168 576 aa14.99□□□□□ -0.01
CCDC28A-201ENST00000332797 OR4C11Q6IEV9 310 aa14.99□□□□□ -0.01
CCDC28A-201ENST00000332797 NUDCD3Q8IVD9 361 aa14.99□□□□□ -0.01
CCDC28A-201ENST00000332797 ANKRD42Q8N9B4 389 aa14.99□□□□□ -0.01
CCDC28A-201ENST00000332797 ACOT4Q8N9L9 421 aa14.99□□□□□ -0.01
CCDC28A-201ENST00000332797 APOBEC4Q8WW27 367 aaKnown RBP14.99□□□□□ -0.01
CCDC28A-201ENST00000332797 C8orf44Q96CB5 159 aa14.99□□□□□ -0.01
CCDC28A-201ENST00000332797 TLCD1Q96CP7 247 aa14.99□□□□□ -0.01
CCDC28A-201ENST00000332797 MESP1Q9BRJ9 268 aa14.99□□□□□ -0.01
CCDC28A-201ENST00000332797 LANCL2Q9NS86 450 aa14.99□□□□□ -0.01
CCDC28A-201ENST00000332797 P4HTMQ9NXG6 502 aa14.99□□□□□ -0.01
CCDC28A-201ENST00000332797 PSD3Q9NYI0 1048 aa14.99□□□□□ -0.01
CCDC28A-201ENST00000332797 PPT2Q9UMR5 302 aa14.99□□□□□ -0.01
CCDC28A-201ENST00000332797 SLC12A4Q9UP95 1085 aa14.99□□□□□ -0.01
CCDC28A-201ENST00000332797 TIMM22Q9Y584 194 aa14.99□□□□□ -0.01
CCDC28A-201ENST00000332797 WDR91A4D1P6 747 aa14.98□□□□□ -0.01
CCDC28A-201ENST00000332797 FAM227AF5H4B4 570 aa14.98□□□□□ -0.01
CCDC28A-201ENST00000332797 H3BQF6 201 aa14.98□□□□□ -0.01
CCDC28A-201ENST00000332797 ERVH48-1M5A8F1 160 aa14.98□□□□□ -0.01
CCDC28A-201ENST00000332797 ALOX12BO75342 701 aa14.98□□□□□ -0.01
CCDC28A-201ENST00000332797 ULK1O75385 1050 aa14.98□□□□□ -0.01
CCDC28A-201ENST00000332797 ACPPP15309 386 aa14.98□□□□□ -0.01
CCDC28A-201ENST00000332797 HTR6P50406 440 aa14.98□□□□□ -0.01
CCDC28A-201ENST00000332797 FOXA1P55317 472 aa14.98□□□□□ -0.01
CCDC28A-201ENST00000332797 LIM2P55344 173 aa14.98□□□□□ -0.01
CCDC28A-201ENST00000332797 RAB38P57729 211 aa14.98□□□□□ -0.01
CCDC28A-201ENST00000332797 EEF1A2Q05639 463 aaKnown RBP14.98□□□□□ -0.01
CCDC28A-201ENST00000332797 LINC00303Q3SY05 128 aa14.98□□□□□ -0.01
CCDC28A-201ENST00000332797 TUBB8Q3ZCM7 444 aa14.98□□□□□ -0.01
CCDC28A-201ENST00000332797 KIRREL2Q6UWL6 708 aa14.98□□□□□ -0.01
CCDC28A-201ENST00000332797 FAM47BQ8NA70 645 aa14.98□□□□□ -0.01
CCDC28A-201ENST00000332797 PPP1R14CQ8TAE6 165 aa14.98□□□□□ -0.01
CCDC28A-201ENST00000332797 METTL21AQ8WXB1 218 aa14.98□□□□□ -0.01
CCDC28A-201ENST00000332797 NACC2Q96BF6 587 aa14.98□□□□□ -0.01
CCDC28A-201ENST00000332797 CNDP1Q96KN2 507 aa14.98□□□□□ -0.01
CCDC28A-201ENST00000332797 TRMOQ9BU70 441 aa14.98□□□□□ -0.01
CCDC28A-201ENST00000332797 BRF2Q9HAW0 419 aa14.98□□□□□ -0.01
CCDC28A-201ENST00000332797 MLXIPLQ9NP71 852 aa14.98□□□□□ -0.01
CCDC28A-201ENST00000332797 TNFRSF12AQ9NP84 129 aa14.98□□□□□ -0.01
CCDC28A-201ENST00000332797 FBXL4Q9UKA2 621 aa14.98□□□□□ -0.01
CCDC28A-201ENST00000332797 DAPP1Q9UN19 280 aa14.98□□□□□ -0.01
CCDC28A-201ENST00000332797 TMEM120BA0PK00 339 aa14.97□□□□□ -0.01
CCDC28A-201ENST00000332797 NPHS1O60500 1241 aa14.97□□□□□ -0.01
CCDC28A-201ENST00000332797 SEMA3DO95025 777 aa14.97□□□□□ -0.01
CCDC28A-201ENST00000332797 SCELO95171 688 aa14.97□□□□□ -0.01
CCDC28A-201ENST00000332797 C8orf89P0DMQ9 161 aa14.97□□□□□ -0.01
CCDC28A-201ENST00000332797 TSFMP43897 325 aaKnown RBP14.97□□□□□ -0.01
CCDC28A-201ENST00000332797 ARFIP1P53367 373 aa14.97□□□□□ -0.01
CCDC28A-201ENST00000332797 RRADP55042 308 aa14.97□□□□□ -0.01
CCDC28A-201ENST00000332797 POLE2P56282 527 aa14.97□□□□□ -0.01
CCDC28A-201ENST00000332797 RHAGQ02094 409 aa14.97□□□□□ -0.01
CCDC28A-201ENST00000332797 AGBL2Q5U5Z8 902 aa14.97□□□□□ -0.01
CCDC28A-201ENST00000332797 CUZD1Q86UP6 607 aa14.97□□□□□ -0.01
CCDC28A-201ENST00000332797 OR11G2Q8NGC1 345 aa14.97□□□□□ -0.01
CCDC28A-201ENST00000332797 ADAMTS18Q8TE60 1221 aa14.97□□□□□ -0.01
CCDC28A-201ENST00000332797 ARL8AQ96BM9 186 aa14.97□□□□□ -0.01
CCDC28A-201ENST00000332797 VPS50Q96JG6 964 aa14.97□□□□□ -0.01
CCDC28A-201ENST00000332797 CSF3RQ99062 836 aa14.97□□□□□ -0.01
CCDC28A-201ENST00000332797 PAIP2Q9BPZ3 127 aaKnown RBP14.97□□□□□ -0.01
CCDC28A-201ENST00000332797 MRPL1Q9BYD6 325 aaKnown RBP14.97□□□□□ -0.01
CCDC28A-201ENST00000332797 ING2Q9H160 280 aa14.97□□□□□ -0.01
CCDC28A-201ENST00000332797 VIPAS39Q9H9C1 493 aa14.97□□□□□ -0.01
CCDC28A-201ENST00000332797 FBXW2Q9UKT8 454 aa14.97□□□□□ -0.01
CCDC28A-201ENST00000332797 ATMQ13315 3056 aa14.97□□□□□ -0.01
CCDC28A-201ENST00000332797 MASP2O00187 686 aa14.96□□□□□ -0.01
CCDC28A-201ENST00000332797 BIRC5O15392 142 aa14.96□□□□□ -0.01
CCDC28A-201ENST00000332797 EEDO75530 441 aaKnown RBP14.96□□□□□ -0.01
CCDC28A-201ENST00000332797 DNAJB5O75953 348 aa14.96□□□□□ -0.01
CCDC28A-201ENST00000332797 CHRNGP07510 517 aa14.96□□□□□ -0.01
CCDC28A-201ENST00000332797 CYC1P08574 325 aa14.96□□□□□ -0.01
CCDC28A-201ENST00000332797 FAM87AP0C7U9 286 aa14.96□□□□□ -0.01
CCDC28A-201ENST00000332797 DHRS4L1P0CG22 281 aa14.96□□□□□ -0.01
CCDC28A-201ENST00000332797 BSGP35613 385 aa14.96□□□□□ -0.01
CCDC28A-201ENST00000332797 CSTF3Q12996 717 aaKnown RBP14.96□□□□□ -0.01
CCDC28A-201ENST00000332797 SLAMF1Q13291 335 aa14.96□□□□□ -0.01
CCDC28A-201ENST00000332797 RCN2Q14257 317 aa14.96□□□□□ -0.01
CCDC28A-201ENST00000332797 ABRAXAS2Q15018 415 aa14.96□□□□□ -0.01
CCDC28A-201ENST00000332797 DCAF10Q5QP82 559 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms