RNA–Protein interactions for RNA: ENST00000329078.7

SPNS2-201, Transcript of sphingolipid transporter 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPNS2, Length 3,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-201ENST00000329078 GREM1O60565 184 aa19.05■□□□□ 0.64
SPNS2-201ENST00000329078 MED26O95402 600 aa19.05■□□□□ 0.64
SPNS2-201ENST00000329078 CBSLP0DN79 551 aa19.05■□□□□ 0.64
SPNS2-201ENST00000329078 PTPN6P29350 595 aa19.05■□□□□ 0.64
SPNS2-201ENST00000329078 CBSP35520 551 aa19.05■□□□□ 0.64
SPNS2-201ENST00000329078 TGM4P49221 684 aa19.05■□□□□ 0.64
SPNS2-201ENST00000329078 HNRNPFP52597 415 aaKnown RBP19.05■□□□□ 0.64
SPNS2-201ENST00000329078 TBPL1P62380 186 aa19.05■□□□□ 0.64
SPNS2-201ENST00000329078 ARMC4Q5T2S8 1044 aa19.05■□□□□ 0.64
SPNS2-201ENST00000329078 LRIF1Q5T3J3 769 aa19.05■□□□□ 0.64
SPNS2-201ENST00000329078 GALNT12Q8IXK2 581 aa19.05■□□□□ 0.64
SPNS2-201ENST00000329078 VMP1Q96GC9 406 aa19.05■□□□□ 0.64
SPNS2-201ENST00000329078 TRBV5-3A0A0A0MS03 114 aa19.05■□□□□ 0.64
SPNS2-201ENST00000329078 FGF18O76093 207 aa19.05■□□□□ 0.64
SPNS2-201ENST00000329078 GPR1P46091 355 aa19.05■□□□□ 0.64
SPNS2-201ENST00000329078 SCARB2Q14108 478 aa19.05■□□□□ 0.64
SPNS2-201ENST00000329078 MED27Q6P2C8 311 aa19.05■□□□□ 0.64
SPNS2-201ENST00000329078 Q6ZNB5 142 aa19.05■□□□□ 0.64
SPNS2-201ENST00000329078 EIF3MQ7L2H7 374 aaKnown RBP19.05■□□□□ 0.64
SPNS2-201ENST00000329078 NRARPQ7Z6K4 114 aa19.05■□□□□ 0.64
SPNS2-201ENST00000329078 BPHLQ86WA6 291 aaPredicted RBP19.05■□□□□ 0.64
SPNS2-201ENST00000329078 CALHM3Q86XJ0 350 aa19.05■□□□□ 0.64
SPNS2-201ENST00000329078 PJA1Q8NG27 643 aa19.05■□□□□ 0.64
SPNS2-201ENST00000329078 SMAD5Q99717 465 aaKnown RBP19.05■□□□□ 0.64
SPNS2-201ENST00000329078 YIPF4Q9BSR8 244 aa19.05■□□□□ 0.64
SPNS2-201ENST00000329078 TRPC4Q9UBN4 977 aa19.05■□□□□ 0.64
SPNS2-201ENST00000329078 RNF6Q9Y252 685 aa19.05■□□□□ 0.64
SPNS2-201ENST00000329078 PCDH17O14917 1159 aa19.05■□□□□ 0.64
SPNS2-201ENST00000329078 LATO43561 262 aa19.05■□□□□ 0.64
SPNS2-201ENST00000329078 TLL1O43897 1013 aa19.05■□□□□ 0.64
SPNS2-201ENST00000329078 CYP2A6P11509 494 aaPredicted RBP19.05■□□□□ 0.64
SPNS2-201ENST00000329078 WNT3P56703 355 aa19.05■□□□□ 0.64
SPNS2-201ENST00000329078 ST8SIA6P61647 398 aa19.05■□□□□ 0.64
SPNS2-201ENST00000329078 CCDC71Q8IV32 467 aaPredicted RBP19.05■□□□□ 0.64
SPNS2-201ENST00000329078 EXOSC8Q96B26 276 aaKnown RBP19.05■□□□□ 0.64
SPNS2-201ENST00000329078 CNTRLQ7Z7A1 2325 aa19.04■□□□□ 0.64
SPNS2-201ENST00000329078 ANTXRLA6NF34 631 aa19.04■□□□□ 0.64
SPNS2-201ENST00000329078 SCAMP2O15127 329 aaKnown RBP19.04■□□□□ 0.64
SPNS2-201ENST00000329078 ZW10O43264 779 aa19.04■□□□□ 0.64
SPNS2-201ENST00000329078 MMP20O60882 483 aa19.04■□□□□ 0.64
SPNS2-201ENST00000329078 FHP07954 510 aa19.04■□□□□ 0.64
SPNS2-201ENST00000329078 CKMT1AP12532 417 aa19.04■□□□□ 0.64
SPNS2-201ENST00000329078 HOXA9P31269 272 aa19.04■□□□□ 0.64
SPNS2-201ENST00000329078 GRK5P34947 590 aa19.04■□□□□ 0.64
SPNS2-201ENST00000329078 MLLT3P42568 568 aaPredicted RBP19.04■□□□□ 0.64
SPNS2-201ENST00000329078 PPIGQ13427 754 aaKnown RBP eCLIP19.04■□□□□ 0.64
SPNS2-201ENST00000329078 CCDC85BQ15834 202 aaPredicted RBP19.04■□□□□ 0.64
SPNS2-201ENST00000329078 TCEAL8Q8IYN2 117 aa19.04■□□□□ 0.64
SPNS2-201ENST00000329078 ENTHD1Q8IYW4 607 aa19.04■□□□□ 0.64
SPNS2-201ENST00000329078 ZNF296Q8WUU4 475 aaPredicted RBP19.04■□□□□ 0.64
SPNS2-201ENST00000329078 OTULINQ96BN8 352 aa19.04■□□□□ 0.64
SPNS2-201ENST00000329078 TRMT2BQ96GJ1 504 aaKnown RBP19.04■□□□□ 0.64
SPNS2-201ENST00000329078 NECTIN3Q9NQS3 549 aa19.04■□□□□ 0.64
SPNS2-201ENST00000329078 WBP11Q9Y2W2 641 aaKnown RBP19.04■□□□□ 0.64
SPNS2-201ENST00000329078 AGAP5A6NIR3 686 aa19.04■□□□□ 0.64
SPNS2-201ENST00000329078 GLOD5A6NK44 160 aa19.04■□□□□ 0.64
SPNS2-201ENST00000329078 IMPA1P29218 277 aa19.04■□□□□ 0.64
SPNS2-201ENST00000329078 AP1S2P56377 157 aa19.04■□□□□ 0.64
SPNS2-201ENST00000329078 SNRPD2P62316 118 aaKnown RBP19.04■□□□□ 0.64
SPNS2-201ENST00000329078 SLC35A2P78381 396 aa19.04■□□□□ 0.64
SPNS2-201ENST00000329078 FXNQ16595 210 aa19.04■□□□□ 0.64
SPNS2-201ENST00000329078 ATAD3CQ5T2N8 411 aa19.04■□□□□ 0.64
SPNS2-201ENST00000329078 COMMD6Q7Z4G1 85 aa19.04■□□□□ 0.64
SPNS2-201ENST00000329078 TESCQ96BS2 214 aa19.04■□□□□ 0.64
SPNS2-201ENST00000329078 MACROD1Q9BQ69 325 aa19.04■□□□□ 0.64
SPNS2-201ENST00000329078 MAGIXQ9H6Y5 334 aa19.04■□□□□ 0.64
SPNS2-201ENST00000329078 NME6O75414 186 aaPredicted RBP19.03■□□□□ 0.64
SPNS2-201ENST00000329078 ST3GAL4Q11206 333 aa19.03■□□□□ 0.64
SPNS2-201ENST00000329078 LYPD8Q6UX82 237 aa19.03■□□□□ 0.64
SPNS2-201ENST00000329078 AMER2Q8N7J2 671 aa19.03■□□□□ 0.64
SPNS2-201ENST00000329078 KLK6Q92876 244 aa19.03■□□□□ 0.64
SPNS2-201ENST00000329078 EFHD2Q96C19 240 aaPredicted RBP19.03■□□□□ 0.64
SPNS2-201ENST00000329078 PCDHGB3Q9Y5G1 929 aa19.03■□□□□ 0.64
SPNS2-201ENST00000329078 CPNE3O75131 537 aaKnown RBP19.03■□□□□ 0.64
SPNS2-201ENST00000329078 SLC6A12P48065 614 aa19.03■□□□□ 0.64
SPNS2-201ENST00000329078 GZMMP51124 257 aa19.03■□□□□ 0.64
SPNS2-201ENST00000329078 DEFA1P59665 94 aa19.03■□□□□ 0.64
SPNS2-201ENST00000329078 DEFA3P59666 94 aa19.03■□□□□ 0.64
SPNS2-201ENST00000329078 NFE2L1Q14494 772 aa19.03■□□□□ 0.64
SPNS2-201ENST00000329078 KDM4DQ6B0I6 523 aa19.03■□□□□ 0.64
SPNS2-201ENST00000329078 BCDIN3DQ7Z5W3 292 aaKnown RBP19.03■□□□□ 0.64
SPNS2-201ENST00000329078 CBARPQ8N350 705 aaPredicted RBP19.03■□□□□ 0.64
SPNS2-201ENST00000329078 ASCC1Q8N9N2 400 aaKnown RBP19.03■□□□□ 0.64
SPNS2-201ENST00000329078 MS4A12Q9NXJ0 267 aa19.03■□□□□ 0.64
SPNS2-201ENST00000329078 KLHL20Q9Y2M5 609 aa19.03■□□□□ 0.64
SPNS2-201ENST00000329078 AP3M1Q9Y2T2 418 aa19.03■□□□□ 0.64
SPNS2-201ENST00000329078 HIDE1A8MVS5 230 aa19.03■□□□□ 0.64
SPNS2-201ENST00000329078 GFRA2O00451 464 aa19.03■□□□□ 0.64
SPNS2-201ENST00000329078 HOXC11O43248 304 aaPredicted RBP19.03■□□□□ 0.64
SPNS2-201ENST00000329078 SGTAO43765 313 aa19.03■□□□□ 0.64
SPNS2-201ENST00000329078 IGFBP1P08833 259 aaPredicted RBP19.03■□□□□ 0.64
SPNS2-201ENST00000329078 TBRG1Q3YBR2 411 aa19.03■□□□□ 0.64
SPNS2-201ENST00000329078 HIST2H2AA3Q6FI13 130 aa19.03■□□□□ 0.64
SPNS2-201ENST00000329078 SERPINA11Q86U17 422 aa19.03■□□□□ 0.64
SPNS2-201ENST00000329078 ZNF480Q8WV37 535 aa19.03■□□□□ 0.64
SPNS2-201ENST00000329078 IRF7Q92985 503 aa19.03■□□□□ 0.64
SPNS2-201ENST00000329078 FYTTD1Q96QD9 318 aaKnown RBP19.03■□□□□ 0.64
SPNS2-201ENST00000329078 SPNS1Q9H2V7 528 aa19.03■□□□□ 0.64
SPNS2-201ENST00000329078 FAM120CQ9NX05 1096 aaKnown RBP19.03■□□□□ 0.64
SPNS2-201ENST00000329078 PITPNM1O00562 1244 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms