RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 DPCDQ9BVM2 203 aaPredicted RBP9.42□□□□□ -0.9
COL12A1-201ENST00000322507 TIMM13Q9Y5L4 95 aaPredicted RBP9.42□□□□□ -0.9
COL12A1-201ENST00000322507 CNTNAP1P78357 1384 aa9.42□□□□□ -0.9
COL12A1-201ENST00000322507 ANXA4P09525 319 aaPredicted RBP9.42□□□□□ -0.9
COL12A1-201ENST00000322507 NRIP1P48552 1158 aa9.42□□□□□ -0.9
COL12A1-201ENST00000322507 PPP1R3BQ86XI6 285 aa9.42□□□□□ -0.9
COL12A1-201ENST00000322507 BEST3Q8N1M1 668 aa9.42□□□□□ -0.9
COL12A1-201ENST00000322507 UCK2Q9BZX2 261 aa9.42□□□□□ -0.9
COL12A1-201ENST00000322507 PTPRJQ12913 1337 aa9.42□□□□□ -0.9
COL12A1-201ENST00000322507 POU2F1P14859 743 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 SLC18A2Q05940 514 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 CTBP1Q13363 440 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 FOXR1Q6PIV2 292 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 KLHL36Q8N4N3 616 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 CYP2S1Q96SQ9 504 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 EBF2Q9HAK2 575 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 ELOVL2Q9NXB9 296 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 NCDNQ9UBB6 729 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 NPEPPSL1A6NEC2 478 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 YDJCA8MPS7 323 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 VIPP01282 170 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 ITPKBP27987 946 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 MAT1AQ00266 395 aaKnown RBP9.41□□□□□ -0.9
COL12A1-201ENST00000322507 LIX1LQ8IVB5 337 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 RBM15BQ8NDT2 890 aaKnown RBP9.41□□□□□ -0.9
COL12A1-201ENST00000322507 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.41□□□□□ -0.9
COL12A1-201ENST00000322507 TSPEARQ8WU66 669 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 PCTPQ9UKL6 214 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 STXBP5LQ9Y2K9 1186 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 SCN9AQ15858 1988 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 KLRK1P26718 216 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 CLCN7P51798 805 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 C21orf62-AS1Q17RA5 79 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 PARP8Q8N3A8 854 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 GDPD1Q8N9F7 314 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 ZFP3Q96NJ6 502 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 MOCS1Q9NZB8 636 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 UGT2A1Q9Y4X1 527 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 PCDHGA2Q9Y5H1 932 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 NT5C1B-RDH14C9J2C7 533 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 ARL6IP5O75915 188 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 TFPIP10646 304 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 CD36P16671 472 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 ICAM3P32942 547 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 ART1P52961 327 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 ZNF33BQ06732 778 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 DET1Q7L5Y6 550 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 OR4K2Q8NGD2 314 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 CCDC120Q96HB5 630 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 SLC19A3Q9BZV2 496 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 USP36Q9P275 1121 aaKnown RBP9.41□□□□□ -0.9
COL12A1-201ENST00000322507 ASH2LQ9UBL3 628 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 MGAT4CQ9UBM8 478 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 PPP3CBP16298 524 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 CLCN4P51793 760 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 ACTBP60709 375 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 ACTG1P63261 375 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 NAT16Q8N8M0 369 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 OR52A5Q9H2C5 316 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 MOXD2PA6NHM9 499 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 A8MX80 341 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 KLF11O14901 512 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 KDELR3O43731 214 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 SCN2BO60939 215 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 RAB5AP20339 215 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 CASP7P55210 303 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 KCNC3Q14003 757 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 BRAT1Q6PJG6 821 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 ALYREFQ86V81 257 aaKnown RBP9.41□□□□□ -0.9
COL12A1-201ENST00000322507 FAM58AQ8N1B3 248 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 OR5K1Q8NHB7 308 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 SLC13A3Q8WWT9 602 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 TMEM80Q96HE8 168 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 SUCNR1Q9BXA5 334 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 KIF25Q9UIL4 384 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 CDC14AQ9UNH5 594 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 TRAV20A0A0B4J274 112 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 INHAP05111 366 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 CRY2Q49AN0 593 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 GPR142Q7Z601 462 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 NCSTNQ92542 709 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 ISOC1Q96CN7 298 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 TTYH2Q9BSA4 534 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 NMUR2Q9GZQ4 415 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 IL26Q9NPH9 171 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 FLRT1Q9NZU1 646 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 ZNF701M0R085 212 aaPredicted RBP9.41□□□□□ -0.9
COL12A1-201ENST00000322507 IL7RP16871 459 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 G0S2P27469 103 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 CNTN2Q02246 1040 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 TNK1Q13470 666 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 ASB18Q6ZVZ8 466 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 OR13C3Q8NGS6 347 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 EXTL1Q92935 676 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 NTAN1Q96AB6 310 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 RASD2Q96D21 266 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 C5orf34Q96MH7 638 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 IL25Q9H293 177 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 IKZF2Q9UKS7 526 aa9.41□□□□□ -0.9
COL12A1-201ENST00000322507 ATG12O94817 140 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms