RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 RMI1Q9H9A7 625 aa12.98□□□□□ -0.33
RFFL-201ENST00000315249 SLC39A1Q9NY26 324 aa12.98□□□□□ -0.33
RFFL-201ENST00000315249 MPZL2O60487 215 aa12.98□□□□□ -0.33
RFFL-201ENST00000315249 MPC1LP0DKB6 136 aa12.98□□□□□ -0.33
RFFL-201ENST00000315249 LPAR4Q99677 370 aa12.98□□□□□ -0.33
RFFL-201ENST00000315249 ZIM2Q9NZV7 527 aa12.98□□□□□ -0.33
RFFL-201ENST00000315249 MAP1BP46821 2468 aaKnown RBP12.98□□□□□ -0.33
RFFL-201ENST00000315249 A0A1B0GVT2 93 aa12.98□□□□□ -0.33
RFFL-201ENST00000315249 DSC3Q14574 896 aa12.98□□□□□ -0.33
RFFL-201ENST00000315249 NXPE4Q6UWF7 544 aa12.98□□□□□ -0.33
RFFL-201ENST00000315249 OR5AR1Q8NGP9 310 aa12.98□□□□□ -0.33
RFFL-201ENST00000315249 B3GNT4Q9C0J1 378 aa12.98□□□□□ -0.33
RFFL-201ENST00000315249 SESN1Q9Y6P5 492 aa12.98□□□□□ -0.33
RFFL-201ENST00000315249 TCTE1Q5JU00 501 aa12.98□□□□□ -0.33
RFFL-201ENST00000315249 PSMA8Q8TAA3 256 aa12.98□□□□□ -0.33
RFFL-201ENST00000315249 FIZ1Q96SL8 496 aa12.98□□□□□ -0.33
RFFL-201ENST00000315249 UBE2ZQ9H832 354 aaPredicted RBP12.98□□□□□ -0.33
RFFL-201ENST00000315249 TPT1P8Q9HAU6 139 aa12.98□□□□□ -0.33
RFFL-201ENST00000315249 A0A1W2PQ72 361 aa12.98□□□□□ -0.33
RFFL-201ENST00000315249 IL3P08700 152 aa12.98□□□□□ -0.33
RFFL-201ENST00000315249 HMGCLP35914 325 aa12.98□□□□□ -0.33
RFFL-201ENST00000315249 RPS9P46781 194 aaKnown RBP12.98□□□□□ -0.33
RFFL-201ENST00000315249 CDKN2DP55273 166 aa12.98□□□□□ -0.33
RFFL-201ENST00000315249 SCAPQ12770 1279 aa12.98□□□□□ -0.33
RFFL-201ENST00000315249 HORMAD2Q8N7B1 307 aa12.98□□□□□ -0.33
RFFL-201ENST00000315249 OR2L3Q8NG85 312 aa12.98□□□□□ -0.33
RFFL-201ENST00000315249 NSUN5Q96P11 429 aaKnown RBP12.98□□□□□ -0.33
RFFL-201ENST00000315249 GIMAP2Q9UG22 337 aa12.98□□□□□ -0.33
RFFL-201ENST00000315249 MYO5AQ9Y4I1 1855 aaKnown RBP12.98□□□□□ -0.33
RFFL-201ENST00000315249 EME2A4GXA9 379 aaPredicted RBP12.97□□□□□ -0.33
RFFL-201ENST00000315249 DIRAS1O95057 198 aa12.97□□□□□ -0.33
RFFL-201ENST00000315249 ST3GAL3Q11203 375 aa12.97□□□□□ -0.33
RFFL-201ENST00000315249 SIGLEC10Q96LC7 697 aa12.97□□□□□ -0.33
RFFL-201ENST00000315249 CGREF1Q99674 301 aa12.97□□□□□ -0.33
RFFL-201ENST00000315249 EDN1P05305 212 aa12.97□□□□□ -0.33
RFFL-201ENST00000315249 PRDX6P30041 224 aa12.97□□□□□ -0.33
RFFL-201ENST00000315249 ARSDP51689 593 aa12.97□□□□□ -0.33
RFFL-201ENST00000315249 SLC7A9P82251 487 aa12.97□□□□□ -0.33
RFFL-201ENST00000315249 DUS1LQ6P1R4 473 aaKnown RBP12.97□□□□□ -0.33
RFFL-201ENST00000315249 AAGABQ6PD74 315 aa12.97□□□□□ -0.33
RFFL-201ENST00000315249 LRRC25Q8N386 305 aaPredicted RBP12.97□□□□□ -0.33
RFFL-201ENST00000315249 C11orf24Q96F05 449 aaPredicted RBP12.97□□□□□ -0.33
RFFL-201ENST00000315249 ZDHHC18Q9NUE0 388 aa12.97□□□□□ -0.33
RFFL-201ENST00000315249 ZNF222Q9UK12 451 aa12.97□□□□□ -0.33
RFFL-201ENST00000315249 KLHL33A6NCF5 533 aa12.97□□□□□ -0.33
RFFL-201ENST00000315249 ZNF487B1APH4 448 aa12.97□□□□□ -0.33
RFFL-201ENST00000315249 SLC16A5O15375 505 aa12.97□□□□□ -0.33
RFFL-201ENST00000315249 RAP2AP10114 183 aa12.97□□□□□ -0.33
RFFL-201ENST00000315249 RPS3AP61247 264 aaKnown RBP12.97□□□□□ -0.33
RFFL-201ENST00000315249 PPP1R8Q12972 351 aaKnown RBP12.97□□□□□ -0.33
RFFL-201ENST00000315249 FIGNL1Q6PIW4 674 aa12.97□□□□□ -0.33
RFFL-201ENST00000315249 ADAMTS19Q8TE59 1207 aa12.97□□□□□ -0.33
RFFL-201ENST00000315249 IL4I1Q96RQ9 567 aa12.97□□□□□ -0.33
RFFL-201ENST00000315249 SMPD3Q9NY59 655 aaPredicted RBP12.97□□□□□ -0.33
RFFL-201ENST00000315249 ACAD8Q9UKU7 415 aa12.97□□□□□ -0.33
RFFL-201ENST00000315249 TTC3P53804 2025 aa12.97□□□□□ -0.33
RFFL-201ENST00000315249 PRSS51A0A1B0GVH4 220 aa12.97□□□□□ -0.33
RFFL-201ENST00000315249 ZBTB42B2RXF5 422 aa12.97□□□□□ -0.33
RFFL-201ENST00000315249 FARS2O95363 451 aaKnown RBP12.97□□□□□ -0.33
RFFL-201ENST00000315249 ECH1Q13011 328 aa12.97□□□□□ -0.33
RFFL-201ENST00000315249 PMS2P3Q13401 168 aa12.97□□□□□ -0.33
RFFL-201ENST00000315249 KLHDC10Q6PID8 442 aa12.97□□□□□ -0.33
RFFL-201ENST00000315249 FAM131AQ6UXB0 335 aa12.97□□□□□ -0.33
RFFL-201ENST00000315249 ZC3H3Q8IXZ2 948 aaKnown RBP12.97□□□□□ -0.33
RFFL-201ENST00000315249 OR9I1Q8NGQ6 314 aa12.97□□□□□ -0.33
RFFL-201ENST00000315249 FAM120CQ9NX05 1096 aaKnown RBP12.97□□□□□ -0.33
RFFL-201ENST00000315249 GBX2P52951 348 aaPredicted RBP12.97□□□□□ -0.33
RFFL-201ENST00000315249 SMCO1Q147U7 214 aa12.97□□□□□ -0.33
RFFL-201ENST00000315249 FBXO42Q6P3S6 717 aa12.97□□□□□ -0.33
RFFL-201ENST00000315249 PNLDC1Q8NA58 520 aaKnown RBP12.97□□□□□ -0.33
RFFL-201ENST00000315249 CENPNQ96H22 339 aaPredicted RBP12.97□□□□□ -0.33
RFFL-201ENST00000315249 EGFP01133 1207 aa12.97□□□□□ -0.33
RFFL-201ENST00000315249 TACSTD2P09758 323 aa12.97□□□□□ -0.33
RFFL-201ENST00000315249 NOVP48745 357 aa12.97□□□□□ -0.33
RFFL-201ENST00000315249 ARSFP54793 590 aa12.97□□□□□ -0.33
RFFL-201ENST00000315249 TUBB3Q13509 450 aa12.97□□□□□ -0.33
RFFL-201ENST00000315249 KIAA0895LQ68EN5 471 aa12.97□□□□□ -0.33
RFFL-201ENST00000315249 OR4C11Q6IEV9 310 aa12.97□□□□□ -0.33
RFFL-201ENST00000315249 IKBIPQ70UQ0 350 aa12.97□□□□□ -0.33
RFFL-201ENST00000315249 LAPTM4BQ86VI4 370 aa12.97□□□□□ -0.33
RFFL-201ENST00000315249 FITM2Q8N6M3 262 aa12.97□□□□□ -0.33
RFFL-201ENST00000315249 YIPF7Q8N8F6 280 aa12.97□□□□□ -0.33
RFFL-201ENST00000315249 TRMT2BQ96GJ1 504 aaKnown RBP12.97□□□□□ -0.33
RFFL-201ENST00000315249 ANKRD27Q96NW4 1050 aa12.97□□□□□ -0.33
RFFL-201ENST00000315249 ATXN10Q9UBB4 475 aa12.97□□□□□ -0.33
RFFL-201ENST00000315249 PRSS38A1L453 326 aa12.96□□□□□ -0.33
RFFL-201ENST00000315249 WRBO00258 174 aa12.96□□□□□ -0.33
RFFL-201ENST00000315249 NR2C1P13056 603 aa12.96□□□□□ -0.33
RFFL-201ENST00000315249 HLA-FP30511 346 aa12.96□□□□□ -0.33
RFFL-201ENST00000315249 FAUP35544 74 aaKnown RBP12.96□□□□□ -0.33
RFFL-201ENST00000315249 TSPAN5P62079 268 aa12.96□□□□□ -0.33
RFFL-201ENST00000315249 SGCAQ16586 387 aa12.96□□□□□ -0.33
RFFL-201ENST00000315249 KLHL26Q53HC5 615 aa12.96□□□□□ -0.33
RFFL-201ENST00000315249 FAM180BQ6P0A1 224 aa12.96□□□□□ -0.33
RFFL-201ENST00000315249 HSD11B1LQ7Z5J1 315 aa12.96□□□□□ -0.33
RFFL-201ENST00000315249 PDPRQ8NCN5 879 aa12.96□□□□□ -0.33
RFFL-201ENST00000315249 ZNF778Q96MU6 729 aa12.96□□□□□ -0.33
RFFL-201ENST00000315249 PGAP2Q9UHJ9 254 aa12.96□□□□□ -0.33
RFFL-201ENST00000315249 CCDC182A6NF36 153 aa12.96□□□□□ -0.33
RFFL-201ENST00000315249 ITGA5P08648 1049 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms