RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 FAAH2Q6GMR7 532 aa10.38□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 OR4C11Q6IEV9 310 aa10.38□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 CYP20A1Q6UW02 462 aa10.38□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 PAGE2Q7Z2X7 111 aa10.38□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 PPP1R32Q7Z5V6 425 aa10.38□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 NUDT13Q86X67 352 aa10.38□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 HOMEZQ8IX15 550 aa10.38□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 CA13Q8N1Q1 262 aa10.38□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 TTC9Q92623 222 aa10.38□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 CNDP1Q96KN2 507 aa10.38□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 PKNOX2Q96KN3 472 aa10.38□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 TRMOQ9BU70 441 aa10.38□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 VN1R1Q9GZP7 353 aa10.38□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 ACBD3Q9H3P7 528 aa10.38□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 BRF2Q9HAW0 419 aa10.38□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 TMBIM4Q9HC24 238 aa10.38□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 EML4Q9HC35 981 aaKnown RBP10.38□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 P4HTMQ9NXG6 502 aa10.38□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 PSD3Q9NYI0 1048 aa10.38□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 AHSPQ9NZD4 102 aa10.38□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 SLC12A4Q9UP95 1085 aa10.38□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 KCNMB2Q9Y691 235 aa10.38□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 CROCCQ5TZA2 2017 aa10.38□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 DOCK10Q96BY6 2186 aa10.38□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 TNRC6AQ8NDV7 1962 aaKnown RBP10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 NSG1A0A0A6YYJ2 146 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 A0A1B0GTL3 188 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 SYNDIG1LA6NDD5 238 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 MKRN2OSH3BPM6 223 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 RTCAO00442 366 aaKnown RBP10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 CLDN4O14493 209 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 SOCS6O14544 535 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 NPHS1O60500 1241 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 B4GALT2O60909 372 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 ULK1O75385 1050 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 JRKO75564 520 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 SEMA3DO95025 777 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 TBX6O95947 436 aaPredicted RBP10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 CHEK2O96017 543 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 PDYNP01213 254 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 BPGMP07738 259 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 UQCRHP07919 91 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 SFTPCP11686 197 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 HSD3B1P14060 373 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 ATP5A1P25705 553 aaKnown RBP10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 HSD3B2P26439 372 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 SERPINB5P36952 375 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 BUD31P41223 144 aaPredicted RBP10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 SERPINB4P48594 390 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 LIM2P55344 173 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 MAGOHP61326 146 aaKnown RBP10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 EEF1A2Q05639 463 aaKnown RBP10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 ZNF33BQ06732 778 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 CHAF1BQ13112 559 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 ABRAXAS2Q15018 415 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 TNFAIP8L3Q5GJ75 292 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 HHATQ5VTY9 493 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 CPZQ66K79 652 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 ZNF793Q6ZN11 406 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 QSOX2Q6ZRP7 698 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 LAPTM4BQ86VI4 370 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 NUDCD3Q8IVD9 361 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 APLFQ8IW19 511 aaPredicted RBP10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 EFCAB3Q8N7B9 438 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 ANKRD42Q8N9B4 389 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 ACOT4Q8N9L9 421 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 FAM47BQ8NA70 645 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 QRFPRQ96P65 431 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 PAIP2Q9BPZ3 127 aaKnown RBP10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 GATA5Q9BWX5 397 aaPredicted RBP10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 SHCBP1LQ9BZQ2 653 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 ING2Q9H160 280 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 ADNPQ9H2P0 1102 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 LYRM4Q9HD34 91 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 RIC8BQ9NVN3 520 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 LYARQ9NX58 379 aaKnown RBP10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 NKIRAS1Q9NYS0 192 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 PHF11Q9UIL8 331 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 ZNF225Q9UK10 706 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 FBXL4Q9UKA2 621 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 FBXW2Q9UKT8 454 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 DAPP1Q9UN19 280 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 MMACHCQ9Y4U1 282 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 HS3ST3B1Q9Y662 390 aa10.37□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 PCSK5Q92824 1860 aa10.36□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 BLACEA4D250 179 aa10.36□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 EIF4E1BA6NMX2 242 aaKnown RBP10.36□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 MANBAO00462 879 aa10.36□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 KLHL41O60662 606 aa10.36□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 PRMT3O60678 531 aa10.36□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 SCELO95171 688 aa10.36□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 HPP00738 406 aa10.36□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 UROSP10746 265 aa10.36□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 CPN2P22792 545 aa10.36□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 TLX1P31314 330 aaPredicted RBP10.36□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 ETV4P43268 484 aa10.36□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 AP2B1P63010 937 aa10.36□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 AIMP2Q13155 320 aaKnown RBP10.36□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 SLAMF1Q13291 335 aa10.36□□□□□ -0.75
CSPG4P1Y-201ENST00000306641 KCNAB2Q13303 367 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms