RNA–Protein interactions for RNA: ENST00000306071.6

CHRNB1-201, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB1, Length 2,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-201ENST00000306071 PPP2R3BQ9Y5P8 575 aa18.1■□□□□ 0.49
CHRNB1-201ENST00000306071 PTPRDP23468 1912 aa18.1■□□□□ 0.49
CHRNB1-201ENST00000306071 LTBP3Q9NS15 1303 aa18.1■□□□□ 0.49
CHRNB1-201ENST00000306071 LOC102723532A0A0G2JNH3 316 aa18.09■□□□□ 0.49
CHRNB1-201ENST00000306071 ANXA5P08758 320 aa18.09■□□□□ 0.49
CHRNB1-201ENST00000306071 FEN1P39748 380 aaKnown RBP18.09■□□□□ 0.49
CHRNB1-201ENST00000306071 ETV3P41162 512 aa18.09■□□□□ 0.49
CHRNB1-201ENST00000306071 CRATP43155 626 aa18.09■□□□□ 0.49
CHRNB1-201ENST00000306071 C10orf120Q5SQS8 335 aa18.09■□□□□ 0.49
CHRNB1-201ENST00000306071 PAQR6Q6TCH4 344 aa18.09■□□□□ 0.49
CHRNB1-201ENST00000306071 TEX261Q6UWH6 196 aa18.09■□□□□ 0.49
CHRNB1-201ENST00000306071 ZNF782Q6ZMW2 699 aaPredicted RBP18.09■□□□□ 0.49
CHRNB1-201ENST00000306071 KCTD20Q7Z5Y7 419 aa18.09■□□□□ 0.49
CHRNB1-201ENST00000306071 AP2M1Q96CW1 435 aa18.09■□□□□ 0.49
CHRNB1-201ENST00000306071 NELL2Q99435 816 aa18.09■□□□□ 0.49
CHRNB1-201ENST00000306071 SLC25A19Q9HC21 320 aa18.09■□□□□ 0.49
CHRNB1-201ENST00000306071 MARCH2Q9P0N8 246 aa18.09■□□□□ 0.49
CHRNB1-201ENST00000306071 FBXO9Q9UK97 447 aaPredicted RBP18.09■□□□□ 0.49
CHRNB1-201ENST00000306071 SNX11Q9Y5W9 270 aa18.09■□□□□ 0.49
CHRNB1-201ENST00000306071 PRSS21Q9Y6M0 314 aa18.09■□□□□ 0.49
CHRNB1-201ENST00000306071 U3KQ87 197 aa18.09■□□□□ 0.49
CHRNB1-201ENST00000306071 H7C0S8 307 aa18.09■□□□□ 0.49
CHRNB1-201ENST00000306071 FABP7O15540 132 aa18.09■□□□□ 0.49
CHRNB1-201ENST00000306071 RGS1Q08116 209 aa18.09■□□□□ 0.49
CHRNB1-201ENST00000306071 CCDC85BQ15834 202 aaPredicted RBP18.09■□□□□ 0.49
CHRNB1-201ENST00000306071 ZNF598Q86UK7 904 aaKnown RBP18.09■□□□□ 0.49
CHRNB1-201ENST00000306071 PDZD3Q86UT5 571 aa18.09■□□□□ 0.49
CHRNB1-201ENST00000306071 KATNAL1Q9BW62 490 aa18.09■□□□□ 0.49
CHRNB1-201ENST00000306071 GPR63Q9BZJ6 419 aa18.09■□□□□ 0.49
CHRNB1-201ENST00000306071 CHST8Q9H2A9 424 aa18.09■□□□□ 0.49
CHRNB1-201ENST00000306071 FLRT1Q9NZU1 646 aa18.09■□□□□ 0.49
CHRNB1-201ENST00000306071 CIB4A0PJX0 185 aa18.08■□□□□ 0.49
CHRNB1-201ENST00000306071 TLR4O00206 839 aa18.08■□□□□ 0.49
CHRNB1-201ENST00000306071 SLC43A1O75387 559 aa18.08■□□□□ 0.49
CHRNB1-201ENST00000306071 GADD45GO95257 159 aa18.08■□□□□ 0.49
CHRNB1-201ENST00000306071 GASTP01350 101 aa18.08■□□□□ 0.49
CHRNB1-201ENST00000306071 MLLT11Q13015 90 aaPredicted RBP18.08■□□□□ 0.49
CHRNB1-201ENST00000306071 CDH18Q13634 790 aa18.08■□□□□ 0.49
CHRNB1-201ENST00000306071 USP30Q70CQ3 517 aa18.08■□□□□ 0.49
CHRNB1-201ENST00000306071 NANOGP1Q8N7R0 232 aa18.08■□□□□ 0.49
CHRNB1-201ENST00000306071 DTX3Q8N9I9 347 aa18.08■□□□□ 0.49
CHRNB1-201ENST00000306071 ZNF680Q8NEM1 530 aa18.08■□□□□ 0.49
CHRNB1-201ENST00000306071 KLHDC9Q8NEP7 349 aa18.08■□□□□ 0.49
CHRNB1-201ENST00000306071 OR8J2Q8NGG1 315 aa18.08■□□□□ 0.49
CHRNB1-201ENST00000306071 ZNF431Q8TF32 576 aaPredicted RBP18.08■□□□□ 0.49
CHRNB1-201ENST00000306071 AP3S1Q92572 193 aa18.08■□□□□ 0.49
CHRNB1-201ENST00000306071 DUSP26Q9BV47 211 aa18.08■□□□□ 0.49
CHRNB1-201ENST00000306071 ACER3Q9NUN7 267 aa18.08■□□□□ 0.49
CHRNB1-201ENST00000306071 EVA1BQ9NVM1 165 aa18.08■□□□□ 0.49
CHRNB1-201ENST00000306071 RHCGQ9UBD6 479 aa18.08■□□□□ 0.49
CHRNB1-201ENST00000306071 CORO2BQ9UQ03 480 aa18.08■□□□□ 0.49
CHRNB1-201ENST00000306071 A8MUA0 341 aa18.08■□□□□ 0.48
CHRNB1-201ENST00000306071 INMT-MINDY4F8WBC2 141 aa18.08■□□□□ 0.48
CHRNB1-201ENST00000306071 ABATP80404 500 aa18.08■□□□□ 0.48
CHRNB1-201ENST00000306071 CYP4F8P98187 520 aa18.08■□□□□ 0.48
CHRNB1-201ENST00000306071 MGAT3Q09327 533 aa18.08■□□□□ 0.48
CHRNB1-201ENST00000306071 TWF1Q12792 350 aa18.08■□□□□ 0.48
CHRNB1-201ENST00000306071 IL18Q14116 193 aa18.08■□□□□ 0.48
CHRNB1-201ENST00000306071 NCF4Q15080 339 aa18.08■□□□□ 0.48
CHRNB1-201ENST00000306071 FLYWCH1Q4VC44 716 aa18.08■□□□□ 0.48
CHRNB1-201ENST00000306071 ZNF628Q5EBL2 1059 aa18.08■□□□□ 0.48
CHRNB1-201ENST00000306071 MEDAGQ5VYS4 303 aa18.08■□□□□ 0.48
CHRNB1-201ENST00000306071 METTL2BQ6P1Q9 378 aaKnown RBP18.08■□□□□ 0.48
CHRNB1-201ENST00000306071 CNIH2Q6PI25 160 aa18.08■□□□□ 0.48
CHRNB1-201ENST00000306071 CERS6Q6ZMG9 384 aa18.08■□□□□ 0.48
CHRNB1-201ENST00000306071 DDX53Q86TM3 631 aaKnown RBP18.08■□□□□ 0.48
CHRNB1-201ENST00000306071 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.08■□□□□ 0.48
CHRNB1-201ENST00000306071 KCTD7Q96MP8 289 aa18.08■□□□□ 0.48
CHRNB1-201ENST00000306071 MARVELD1Q9BSK0 173 aa18.08■□□□□ 0.48
CHRNB1-201ENST00000306071 ZNF224Q9NZL3 707 aa18.08■□□□□ 0.48
CHRNB1-201ENST00000306071 ELF5Q9UKW6 265 aaPredicted RBP18.08■□□□□ 0.48
CHRNB1-201ENST00000306071 ALPK3Q96L96 1907 aa18.08■□□□□ 0.48
CHRNB1-201ENST00000306071 NLRC5Q86WI3 1866 aa18.07■□□□□ 0.48
CHRNB1-201ENST00000306071 POLR2AP24928 1970 aaKnown RBP18.07■□□□□ 0.48
CHRNB1-201ENST00000306071 PRAMEF25A6NGN4 478 aa18.07■□□□□ 0.48
CHRNB1-201ENST00000306071 A8MVJ9 347 aa18.07■□□□□ 0.48
CHRNB1-201ENST00000306071 NFKBIEO00221 500 aa18.07■□□□□ 0.48
CHRNB1-201ENST00000306071 F2P00734 622 aa18.07■□□□□ 0.48
CHRNB1-201ENST00000306071 TRBC1P01850 177 aa18.07■□□□□ 0.48
CHRNB1-201ENST00000306071 PRPH2P23942 346 aa18.07■□□□□ 0.48
CHRNB1-201ENST00000306071 SOX9P48436 509 aa18.07■□□□□ 0.48
CHRNB1-201ENST00000306071 CAV3P56539 151 aa18.07■□□□□ 0.48
CHRNB1-201ENST00000306071 UBE3AQ05086 875 aa18.07■□□□□ 0.48
CHRNB1-201ENST00000306071 P2RY14Q15391 338 aa18.07■□□□□ 0.48
CHRNB1-201ENST00000306071 TMIGD1Q6UXZ0 262 aa18.07■□□□□ 0.48
CHRNB1-201ENST00000306071 TAGAPQ8N103 731 aa18.07■□□□□ 0.48
CHRNB1-201ENST00000306071 TMEM145Q8NBT3 493 aa18.07■□□□□ 0.48
CHRNB1-201ENST00000306071 GALNT11Q8NCW6 608 aa18.07■□□□□ 0.48
CHRNB1-201ENST00000306071 PIP5K1AQ99755 562 aa18.07■□□□□ 0.48
CHRNB1-201ENST00000306071 HTATIP2Q9BUP3 242 aa18.07■□□□□ 0.48
CHRNB1-201ENST00000306071 ARHGAP39Q9C0H5 1083 aa18.07■□□□□ 0.48
CHRNB1-201ENST00000306071 PRM3Q9NNZ6 103 aa18.07■□□□□ 0.48
CHRNB1-201ENST00000306071 PIM2Q9P1W9 311 aa18.07■□□□□ 0.48
CHRNB1-201ENST00000306071 ING4Q9UNL4 249 aa18.07■□□□□ 0.48
CHRNB1-201ENST00000306071 TSPAN4O14817 238 aa18.07■□□□□ 0.48
CHRNB1-201ENST00000306071 PLOD3O60568 738 aa18.07■□□□□ 0.48
CHRNB1-201ENST00000306071 TPPPO94811 219 aa18.07■□□□□ 0.48
CHRNB1-201ENST00000306071 PRAMEF1O95521 474 aa18.07■□□□□ 0.48
CHRNB1-201ENST00000306071 CR2P20023 1033 aa18.07■□□□□ 0.48
CHRNB1-201ENST00000306071 TACR2P21452 398 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms