RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 GOLGA2P5Q9HBQ8 144 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 CD84Q9UIB8 345 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 TEX13DA0A0J9YY54 714 aaPredicted RBP7.38□□□□□ -1.23
SF3B3-201ENST00000302516 E7ESA3 106 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 ATG12O94817 140 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 H2AFB2P0C5Z0 115 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 HOXC8P31273 242 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 GALNT1Q10472 559 aaPredicted RBP7.38□□□□□ -1.23
SF3B3-201ENST00000302516 TOR1AIP1Q5JTV8 583 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 ARHGAP12Q8IWW6 846 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 ELMOD2Q8IZ81 293 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 OR13J1Q8NGT2 312 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 CD300LFQ8TDQ1 290 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 JPH3Q8WXH2 748 aaPredicted RBP7.38□□□□□ -1.23
SF3B3-201ENST00000302516 ANKRD66B4E2M5 251 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 TLL1O43897 1013 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 ZNF821O75541 412 aaPredicted RBP7.38□□□□□ -1.23
SF3B3-201ENST00000302516 KLK1P06870 262 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 CYCSP99999 105 aaKnown RBP7.38□□□□□ -1.23
SF3B3-201ENST00000302516 ZNF33BQ06732 778 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 CDK10Q15131 360 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 SLC10A6Q3KNW5 377 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 NANOGP8Q6NSW7 305 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 GDPD4Q6W3E5 623 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 TMED4Q7Z7H5 227 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 PDZD9Q8IXQ8 264 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 OR4F6Q8NGB9 312 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 TCEAL3Q969E4 200 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 NANOGQ9H9S0 305 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 ELOVL2Q9NXB9 296 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 PADI3Q9ULW8 664 aa7.38□□□□□ -1.23
SF3B3-201ENST00000302516 CCDC88CQ9P219 2028 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 TTC34A8MYJ7 566 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 UPK3BL1B0FP48 263 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 BTBD19C9JJ37 291 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 UPK3BL2E5RIL1 263 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 GPR25O00155 361 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 SCGB2A1O75556 95 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 MINDY4Q4G0A6 757 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 C1orf74Q96LT6 269 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 HS6ST2Q96MM7 605 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 HBEGFQ99075 208 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 SLC5A7Q9GZV3 580 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 RNF208Q9H0X6 261 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 REEP4Q9H6H4 257 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 FAIMQ9NVQ4 179 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 TMPRSS11EQ9UL52 423 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 TRAPPC13A5PLN9 417 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 CCL22O00626 93 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 AK1P00568 194 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 PTPN2P17706 415 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 SOWAHAQ2M3V2 549 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 INAVAQ3KP66 663 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 SPIN3Q5JUX0 258 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 OR4F3Q6IEY1 312 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 TSPYL5Q86VY4 417 aaPredicted RBP7.37□□□□□ -1.23
SF3B3-201ENST00000302516 NAT16Q8N8M0 369 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 DPF3Q92784 378 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 NELL2Q99435 816 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 ANKRD60Q9BZ19 345 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 MIR1-1HGQ9H1L0 117 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 DNAJC27Q9NZQ0 273 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 TMEM233B4DJY2 109 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 M0R2N6 131 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 ERI3O43414 337 aaKnown RBP7.37□□□□□ -1.23
SF3B3-201ENST00000302516 ITGA5P08648 1049 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 UGT2A3Q6UWM9 527 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 NETO2Q8NC67 525 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 NINJ1Q92982 152 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 PYCR2Q96C36 320 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 C16orf58Q96GQ5 468 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 MSANTD3Q96H12 275 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 TMEM175Q9BSA9 504 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 SLC6A16Q9GZN6 736 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 ARMC1Q9NVT9 282 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 CLCA3PQ9Y6N3 262 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 A0A1W2PPW3 197 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 TCRBV7S3A2A0A539 114 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 BPNT1O95861 308 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 ALAS2P22557 587 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 CSKP41240 450 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 NKAPLQ5M9Q1 402 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 BLOC1S3Q6QNY0 202 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 HSDL2Q6YN16 418 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 OR56A3Q8NH54 315 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 HERVK_113Q902F9 699 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 TRIM43Q96BQ3 446 aaPredicted RBP7.37□□□□□ -1.23
SF3B3-201ENST00000302516 CDK15Q96Q40 435 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 OR51I1Q9H343 314 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.37□□□□□ -1.23
SF3B3-201ENST00000302516 SH2B3Q9UQQ2 575 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 FARSAQ9Y285 508 aaKnown RBP7.37□□□□□ -1.23
SF3B3-201ENST00000302516 ITGB4P16144 1822 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 TRAV6A0A075B6T7 132 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 SLC22A31A6NKX4 558 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 PRAF2O60831 178 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 ADH1BP00325 375 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 GP1BBP13224 206 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 ELK4P28324 431 aa7.37□□□□□ -1.23
SF3B3-201ENST00000302516 HTR2BP41595 481 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms