RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 COPZ1P61923 177 aa9.63□□□□□ -0.87
HMGCR-201ENST00000287936 NCS1P62166 190 aa9.63□□□□□ -0.87
HMGCR-201ENST00000287936 YBX1P67809 324 aaKnown RBP9.63□□□□□ -0.87
HMGCR-201ENST00000287936 EIF4HQ15056 248 aaKnown RBP9.63□□□□□ -0.87
HMGCR-201ENST00000287936 TBCEQ15813 527 aaPredicted RBP9.63□□□□□ -0.87
HMGCR-201ENST00000287936 NDUFA9Q16795 377 aa9.63□□□□□ -0.87
HMGCR-201ENST00000287936 CATSPEREQ5SY80 951 aa9.63□□□□□ -0.87
HMGCR-201ENST00000287936 HENMT1Q5T8I9 393 aaKnown RBP9.63□□□□□ -0.87
HMGCR-201ENST00000287936 SLCO4C1Q6ZQN7 724 aa9.63□□□□□ -0.87
HMGCR-201ENST00000287936 GRASPQ7Z6J2 395 aaPredicted RBP9.63□□□□□ -0.87
HMGCR-201ENST00000287936 EGFL6Q8IUX8 553 aa9.63□□□□□ -0.87
HMGCR-201ENST00000287936 KLHL6Q8WZ60 621 aa9.63□□□□□ -0.87
HMGCR-201ENST00000287936 CALML5Q9NZT1 146 aa9.63□□□□□ -0.87
HMGCR-201ENST00000287936 TRBV5-3A0A0A0MS03 114 aa9.63□□□□□ -0.87
HMGCR-201ENST00000287936 AREL1O15033 823 aa9.63□□□□□ -0.87
HMGCR-201ENST00000287936 TNNI3P19429 210 aa9.63□□□□□ -0.87
HMGCR-201ENST00000287936 CRISP1P54107 249 aa9.63□□□□□ -0.87
HMGCR-201ENST00000287936 PHC1P78364 1004 aa9.63□□□□□ -0.87
HMGCR-201ENST00000287936 ZNF45Q02386 682 aa9.63□□□□□ -0.87
HMGCR-201ENST00000287936 RPA4Q13156 261 aa9.63□□□□□ -0.87
HMGCR-201ENST00000287936 SF1Q15637 639 aaKnown RBP9.63□□□□□ -0.87
HMGCR-201ENST00000287936 LCTLQ6UWM7 567 aa9.63□□□□□ -0.87
HMGCR-201ENST00000287936 ZNF765Q7L2R6 523 aa9.63□□□□□ -0.87
HMGCR-201ENST00000287936 TMEM150AQ86TG1 271 aa9.63□□□□□ -0.87
HMGCR-201ENST00000287936 AKAP14Q86UN6 197 aa9.63□□□□□ -0.87
HMGCR-201ENST00000287936 RBM12BQ8IXT5 1001 aaKnown RBP9.63□□□□□ -0.87
HMGCR-201ENST00000287936 NDNFQ8TB73 568 aa9.63□□□□□ -0.87
HMGCR-201ENST00000287936 WDR20Q8TBZ3 569 aa9.63□□□□□ -0.87
HMGCR-201ENST00000287936 RAB7BQ96AH8 199 aa9.63□□□□□ -0.87
HMGCR-201ENST00000287936 HRASLS5Q96KN8 279 aa9.63□□□□□ -0.87
HMGCR-201ENST00000287936 DPEP2Q9H4A9 486 aa9.63□□□□□ -0.87
HMGCR-201ENST00000287936 C11orf49Q9H6J7 331 aa9.63□□□□□ -0.87
HMGCR-201ENST00000287936 PELI2Q9HAT8 420 aa9.63□□□□□ -0.87
HMGCR-201ENST00000287936 IMP3Q9NV31 184 aaKnown RBP9.63□□□□□ -0.87
HMGCR-201ENST00000287936 HCFC1R1Q9NWW0 138 aa9.63□□□□□ -0.87
HMGCR-201ENST00000287936 NFKBIL1Q9UBC1 381 aaPredicted RBP9.63□□□□□ -0.87
HMGCR-201ENST00000287936 NPIPB8E9PQR5 432 aa9.62□□□□□ -0.87
HMGCR-201ENST00000287936 TAF4O00268 1085 aa9.62□□□□□ -0.87
HMGCR-201ENST00000287936 FAAHO00519 579 aa9.62□□□□□ -0.87
HMGCR-201ENST00000287936 TBX1O43435 398 aa9.62□□□□□ -0.87
HMGCR-201ENST00000287936 OXSR1O95747 527 aaPredicted RBP9.62□□□□□ -0.87
HMGCR-201ENST00000287936 C6P13671 934 aa9.62□□□□□ -0.87
HMGCR-201ENST00000287936 ELAVL3Q14576 367 aaKnown RBP9.62□□□□□ -0.87
HMGCR-201ENST00000287936 CDKN3Q16667 212 aa9.62□□□□□ -0.87
HMGCR-201ENST00000287936 PDZK1Q5T2W1 519 aa9.62□□□□□ -0.87
HMGCR-201ENST00000287936 RSBN1Q5VWQ0 802 aaPredicted RBP9.62□□□□□ -0.87
HMGCR-201ENST00000287936 ERN2Q76MJ5 926 aaKnown RBP9.62□□□□□ -0.87
HMGCR-201ENST00000287936 PARS2Q7L3T8 475 aaKnown RBP9.62□□□□□ -0.87
HMGCR-201ENST00000287936 C16orf62Q7Z3J2 963 aa9.62□□□□□ -0.87
HMGCR-201ENST00000287936 TMEM179BQ7Z7N9 219 aa9.62□□□□□ -0.87
HMGCR-201ENST00000287936 RBM23Q86U06 439 aaKnown RBP9.62□□□□□ -0.87
HMGCR-201ENST00000287936 C11orf74Q86VG3 221 aa9.62□□□□□ -0.87
HMGCR-201ENST00000287936 CACUL1Q86Y37 369 aa9.62□□□□□ -0.87
HMGCR-201ENST00000287936 ADAMTS19Q8TE59 1207 aa9.62□□□□□ -0.87
HMGCR-201ENST00000287936 DUSP21Q9H596 190 aa9.62□□□□□ -0.87
HMGCR-201ENST00000287936 MS4A12Q9NXJ0 267 aa9.62□□□□□ -0.87
HMGCR-201ENST00000287936 ACSL6Q9UKU0 697 aa9.62□□□□□ -0.87
HMGCR-201ENST00000287936 SLC5A10A0PJK1 596 aa9.62□□□□□ -0.87
HMGCR-201ENST00000287936 TRIM64A6NGJ6 449 aa9.62□□□□□ -0.87
HMGCR-201ENST00000287936 LCKP06239 509 aa9.62□□□□□ -0.87
HMGCR-201ENST00000287936 PPP5CP53041 499 aa9.62□□□□□ -0.87
HMGCR-201ENST00000287936 TAS2R41P59536 307 aa9.62□□□□□ -0.87
HMGCR-201ENST00000287936 SLC35A2P78381 396 aa9.62□□□□□ -0.87
HMGCR-201ENST00000287936 HTRA1Q92743 480 aa9.62□□□□□ -0.87
HMGCR-201ENST00000287936 DSN1Q9H410 356 aa9.62□□□□□ -0.87
HMGCR-201ENST00000287936 TEKT2Q9UIF3 430 aa9.62□□□□□ -0.87
HMGCR-201ENST00000287936 MKLN1Q9UL63 735 aa9.62□□□□□ -0.87
HMGCR-201ENST00000287936 NDRG4Q9ULP0 352 aaKnown RBP9.62□□□□□ -0.87
HMGCR-201ENST00000287936 AP3D1O14617 1153 aa9.62□□□□□ -0.87
HMGCR-201ENST00000287936 ADAP00813 363 aa9.62□□□□□ -0.87
HMGCR-201ENST00000287936 NUDT7P0C024 238 aa9.62□□□□□ -0.87
HMGCR-201ENST00000287936 CD247P20963 164 aa9.62□□□□□ -0.87
HMGCR-201ENST00000287936 ITGB7P26010 798 aa9.62□□□□□ -0.87
HMGCR-201ENST00000287936 CD40LGP29965 261 aa9.62□□□□□ -0.87
HMGCR-201ENST00000287936 MMP12P39900 470 aa9.62□□□□□ -0.87
HMGCR-201ENST00000287936 SEPHS1P49903 392 aa9.62□□□□□ -0.87
HMGCR-201ENST00000287936 TARDBPQ13148 414 aaKnown RBP eCLIP9.62□□□□□ -0.874e-12■■■■■ 46.6
HMGCR-201ENST00000287936 ZNF181Q2M3W8 571 aa9.62□□□□□ -0.87
HMGCR-201ENST00000287936 SLC22A16Q86VW1 577 aa9.62□□□□□ -0.87
HMGCR-201ENST00000287936 METTL4Q8N3J2 472 aa9.62□□□□□ -0.87
HMGCR-201ENST00000287936 OR6Q1Q8NGQ2 317 aa9.62□□□□□ -0.87
HMGCR-201ENST00000287936 CAMK1GQ96NX5 476 aa9.62□□□□□ -0.87
HMGCR-201ENST00000287936 ZCCHC3Q9NUD5 404 aaKnown RBP9.62□□□□□ -0.87
HMGCR-201ENST00000287936 ZNF232Q9UNY5 417 aa9.62□□□□□ -0.87
HMGCR-201ENST00000287936 ZNF780BQ9Y6R6 833 aa9.62□□□□□ -0.87
HMGCR-201ENST00000287936 KMOO15229 486 aa9.61□□□□□ -0.87
HMGCR-201ENST00000287936 RFPL2O75678 378 aa9.61□□□□□ -0.87
HMGCR-201ENST00000287936 SEMA3DO95025 777 aa9.61□□□□□ -0.87
HMGCR-201ENST00000287936 CDK1P06493 297 aa9.61□□□□□ -0.87
HMGCR-201ENST00000287936 STSP08842 583 aa9.61□□□□□ -0.87
HMGCR-201ENST00000287936 GSTM3P21266 225 aa9.61□□□□□ -0.87
HMGCR-201ENST00000287936 ZNF10P21506 573 aaPredicted RBP9.61□□□□□ -0.87
HMGCR-201ENST00000287936 CCT3P49368 545 aaKnown RBP9.61□□□□□ -0.87
HMGCR-201ENST00000287936 PRR5P85299 388 aa9.61□□□□□ -0.87
HMGCR-201ENST00000287936 TSTQ16762 297 aaKnown RBP9.61□□□□□ -0.87
HMGCR-201ENST00000287936 ANKDD1AQ495B1 522 aa9.61□□□□□ -0.87
HMGCR-201ENST00000287936 MMAAQ8IVH4 418 aaKnown RBP9.61□□□□□ -0.87
HMGCR-201ENST00000287936 CHPFQ8IZ52 775 aa9.61□□□□□ -0.87
HMGCR-201ENST00000287936 POF1BQ8WVV4 589 aa9.61□□□□□ -0.87
HMGCR-201ENST00000287936 AP3S1Q92572 193 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms