RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 GATA5Q9BWX5 397 aaPredicted RBP17.71■□□□□ 0.42
CYSTM1-201ENST00000261811 PRDM7Q9NQW5 492 aa17.71■□□□□ 0.42
CYSTM1-201ENST00000261811 ACSS2Q9NR19 701 aa17.71■□□□□ 0.42
CYSTM1-201ENST00000261811 MS4A12Q9NXJ0 267 aa17.71■□□□□ 0.42
CYSTM1-201ENST00000261811 NKIRAS1Q9NYS0 192 aa17.71■□□□□ 0.42
CYSTM1-201ENST00000261811 CROCCQ5TZA2 2017 aa17.7■□□□□ 0.42
CYSTM1-201ENST00000261811 ARHGAP10A1A4S6 786 aa17.7■□□□□ 0.42
CYSTM1-201ENST00000261811 BLACEA4D250 179 aa17.7■□□□□ 0.42
CYSTM1-201ENST00000261811 SYNDIG1LA6NDD5 238 aa17.7■□□□□ 0.42
CYSTM1-201ENST00000261811 AGPSO00116 658 aa17.7■□□□□ 0.42
CYSTM1-201ENST00000261811 SAP18O00422 153 aaKnown RBP17.7■□□□□ 0.42
CYSTM1-201ENST00000261811 MANBAO00462 879 aa17.7■□□□□ 0.42
CYSTM1-201ENST00000261811 TBX6O95947 436 aaPredicted RBP17.7■□□□□ 0.42
CYSTM1-201ENST00000261811 PDYNP01213 254 aa17.7■□□□□ 0.42
CYSTM1-201ENST00000261811 FURINP09958 794 aa17.7■□□□□ 0.42
CYSTM1-201ENST00000261811 HIST1H1TP22492 207 aaPredicted RBP17.7■□□□□ 0.42
CYSTM1-201ENST00000261811 RAB38P57729 211 aa17.7■□□□□ 0.42
CYSTM1-201ENST00000261811 MAGOHP61326 146 aaKnown RBP17.7■□□□□ 0.42
CYSTM1-201ENST00000261811 OLR1P78380 273 aa17.7■□□□□ 0.42
CYSTM1-201ENST00000261811 GALNT1Q10472 559 aaPredicted RBP17.7■□□□□ 0.42
CYSTM1-201ENST00000261811 CSTF3Q12996 717 aaKnown RBP17.7■□□□□ 0.42
CYSTM1-201ENST00000261811 TBR1Q16650 682 aa17.7■□□□□ 0.42
CYSTM1-201ENST00000261811 ATP1A1-AS1Q5TC04 95 aa17.7■□□□□ 0.42
CYSTM1-201ENST00000261811 FAM69BQ5VUD6 431 aa17.7■□□□□ 0.42
CYSTM1-201ENST00000261811 CYP20A1Q6UW02 462 aa17.7■□□□□ 0.42
CYSTM1-201ENST00000261811 MRGPREQ86SM8 312 aa17.7■□□□□ 0.42
CYSTM1-201ENST00000261811 NUDT13Q86X67 352 aa17.7■□□□□ 0.42
CYSTM1-201ENST00000261811 CA13Q8N1Q1 262 aa17.7■□□□□ 0.42
CYSTM1-201ENST00000261811 CLEC1AQ8NC01 280 aa17.7■□□□□ 0.42
CYSTM1-201ENST00000261811 AICDAQ9GZX7 198 aa17.7■□□□□ 0.42
CYSTM1-201ENST00000261811 LYRM4Q9HD34 91 aa17.7■□□□□ 0.42
CYSTM1-201ENST00000261811 SLC12A4Q9UP95 1085 aa17.7■□□□□ 0.42
CYSTM1-201ENST00000261811 CFAP47Q6ZTR5 3102 aa17.69■□□□□ 0.42
CYSTM1-201ENST00000261811 ITPR1Q14643 2758 aa17.69■□□□□ 0.42
CYSTM1-201ENST00000261811 KLHL41O60662 606 aa17.69■□□□□ 0.42
CYSTM1-201ENST00000261811 ALOX12BO75342 701 aa17.69■□□□□ 0.42
CYSTM1-201ENST00000261811 SNUPNO95149 360 aaKnown RBP17.69■□□□□ 0.42
CYSTM1-201ENST00000261811 B3GALT4O96024 378 aa17.69■□□□□ 0.42
CYSTM1-201ENST00000261811 C8orf89P0DMQ9 161 aa17.69■□□□□ 0.42
CYSTM1-201ENST00000261811 UROSP10746 265 aa17.69■□□□□ 0.42
CYSTM1-201ENST00000261811 SFTPCP11686 197 aa17.69■□□□□ 0.42
CYSTM1-201ENST00000261811 ACPPP15309 386 aa17.69■□□□□ 0.42
CYSTM1-201ENST00000261811 ATP5A1P25705 553 aaKnown RBP17.69■□□□□ 0.42
CYSTM1-201ENST00000261811 CERS1P27544 350 aa17.69■□□□□ 0.42
CYSTM1-201ENST00000261811 TLX1P31314 330 aaPredicted RBP17.69■□□□□ 0.42
CYSTM1-201ENST00000261811 ETV4P43268 484 aa17.69■□□□□ 0.42
CYSTM1-201ENST00000261811 SERPINB4P48594 390 aa17.69■□□□□ 0.42
CYSTM1-201ENST00000261811 SLC18A1P54219 525 aa17.69■□□□□ 0.42
CYSTM1-201ENST00000261811 LAPTM4BQ86VI4 370 aa17.69■□□□□ 0.42
CYSTM1-201ENST00000261811 APLFQ8IW19 511 aaPredicted RBP17.69■□□□□ 0.42
CYSTM1-201ENST00000261811 RNF175Q8N4F7 328 aa17.69■□□□□ 0.42
CYSTM1-201ENST00000261811 ACOT4Q8N9L9 421 aa17.69■□□□□ 0.42
CYSTM1-201ENST00000261811 WBP1Q96G27 269 aa17.69■□□□□ 0.42
CYSTM1-201ENST00000261811 UBL7Q96S82 380 aaPredicted RBP17.69■□□□□ 0.42
CYSTM1-201ENST00000261811 PAIP2Q9BPZ3 127 aaKnown RBP17.69■□□□□ 0.42
CYSTM1-201ENST00000261811 MECRQ9BV79 373 aa17.69■□□□□ 0.42
CYSTM1-201ENST00000261811 P4HTMQ9NXG6 502 aa17.69■□□□□ 0.42
CYSTM1-201ENST00000261811 PHF11Q9UIL8 331 aa17.69■□□□□ 0.42
CYSTM1-201ENST00000261811 ZNF225Q9UK10 706 aa17.69■□□□□ 0.42
CYSTM1-201ENST00000261811 DAPP1Q9UN19 280 aa17.69■□□□□ 0.42
CYSTM1-201ENST00000261811 KCNMB2Q9Y691 235 aa17.69■□□□□ 0.42
CYSTM1-201ENST00000261811 MED13Q9UHV7 2174 aa17.68■□□□□ 0.42
CYSTM1-201ENST00000261811 A0A1B0GTL3 188 aa17.68■□□□□ 0.42
CYSTM1-201ENST00000261811 ARGFXA6NJG6 315 aa17.68■□□□□ 0.42
CYSTM1-201ENST00000261811 C4orf51C9J302 202 aa17.68■□□□□ 0.42
CYSTM1-201ENST00000261811 PLPP1O14494 284 aa17.68■□□□□ 0.42
CYSTM1-201ENST00000261811 PRMT3O60678 531 aa17.68■□□□□ 0.42
CYSTM1-201ENST00000261811 B4GALT2O60909 372 aa17.68■□□□□ 0.42
CYSTM1-201ENST00000261811 SCELO95171 688 aa17.68■□□□□ 0.42
CYSTM1-201ENST00000261811 AP2B1P63010 937 aa17.68■□□□□ 0.42
CYSTM1-201ENST00000261811 SNRPNP63162 240 aaKnown RBP17.68■□□□□ 0.42
CYSTM1-201ENST00000261811 SLAMF1Q13291 335 aa17.68■□□□□ 0.42
CYSTM1-201ENST00000261811 ATP1A4Q13733 1029 aa17.68■□□□□ 0.42
CYSTM1-201ENST00000261811 IRAK1BP1Q5VVH5 260 aa17.68■□□□□ 0.42
CYSTM1-201ENST00000261811 PPP1R32Q7Z5V6 425 aa17.68■□□□□ 0.42
CYSTM1-201ENST00000261811 KIRREL3Q8IZU9 778 aa17.68■□□□□ 0.42
CYSTM1-201ENST00000261811 ZCCHC7Q8N3Z6 543 aaKnown RBP17.68■□□□□ 0.42
CYSTM1-201ENST00000261811 ANKRD42Q8N9B4 389 aa17.68■□□□□ 0.42
CYSTM1-201ENST00000261811 PLPP5Q8NEB5 264 aa17.68■□□□□ 0.42
CYSTM1-201ENST00000261811 EXTL1Q92935 676 aa17.68■□□□□ 0.42
CYSTM1-201ENST00000261811 TLCD1Q96CP7 247 aa17.68■□□□□ 0.42
CYSTM1-201ENST00000261811 VN1R1Q9GZP7 353 aa17.68■□□□□ 0.42
CYSTM1-201ENST00000261811 ATP13A2Q9NQ11 1180 aa17.68■□□□□ 0.42
CYSTM1-201ENST00000261811 LYARQ9NX58 379 aaKnown RBP17.68■□□□□ 0.42
CYSTM1-201ENST00000261811 VPS29Q9UBQ0 182 aa17.68■□□□□ 0.42
CYSTM1-201ENST00000261811 ADAM29Q9UKF5 820 aa17.68■□□□□ 0.42
CYSTM1-201ENST00000261811 MMACHCQ9Y4U1 282 aa17.68■□□□□ 0.42
CYSTM1-201ENST00000261811 HS3ST3B1Q9Y662 390 aa17.68■□□□□ 0.42
CYSTM1-201ENST00000261811 DOCK10Q96BY6 2186 aa17.67■□□□□ 0.42
CYSTM1-201ENST00000261811 TMEM120BA0PK00 339 aa17.67■□□□□ 0.42
CYSTM1-201ENST00000261811 RTCAO00442 366 aaKnown RBP17.67■□□□□ 0.42
CYSTM1-201ENST00000261811 GUCY1B2O75343 617 aa17.67■□□□□ 0.42
CYSTM1-201ENST00000261811 CDC123O75794 336 aaPredicted RBP17.67■□□□□ 0.42
CYSTM1-201ENST00000261811 GRK2P25098 689 aa17.67■□□□□ 0.42
CYSTM1-201ENST00000261811 BUD31P41223 144 aaPredicted RBP17.67■□□□□ 0.42
CYSTM1-201ENST00000261811 LIM2P55344 173 aa17.67■□□□□ 0.42
CYSTM1-201ENST00000261811 HSD17B7P56937 341 aa17.67■□□□□ 0.42
CYSTM1-201ENST00000261811 RUNX2Q13950 521 aa17.67■□□□□ 0.42
CYSTM1-201ENST00000261811 NSDHLQ15738 373 aa17.67■□□□□ 0.42
CYSTM1-201ENST00000261811 IMPG1Q17R60 797 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms