RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 WDR45Q9Y484 360 aa11.67□□□□□ -0.54
COL8A1-201ENST00000261037 LCHNA4D1U4 455 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 NARSO43776 548 aaKnown RBP11.66□□□□□ -0.54
COL8A1-201ENST00000261037 IL3P08700 152 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 PCSK2P16519 638 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 MAP2K4P45985 399 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 SOX2P48431 317 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 EMX2Q04743 252 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 CCINQ13939 588 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 RAB12Q6IQ22 244 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 GALNT12Q8IXK2 581 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 SLC37A3Q8NCC5 494 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 ZNF461Q8TAF7 563 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 SHKBP1Q8TBC3 707 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 IRF7Q92985 503 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 AURKBQ96GD4 344 aaPredicted RBP11.66□□□□□ -0.54
COL8A1-201ENST00000261037 TGM7Q96PF1 710 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 ACTR3BQ9P1U1 418 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 SLC45A1Q9Y2W3 748 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 GMEB1Q9Y692 573 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 PAK4O96013 591 aaPredicted RBP11.66□□□□□ -0.54
COL8A1-201ENST00000261037 JMJD7P0C870 316 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 FPR1P21462 350 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 GNG2P59768 71 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 ZNF763Q0D2J5 394 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 ZNF630Q2M218 657 aaPredicted RBP11.66□□□□□ -0.54
COL8A1-201ENST00000261037 CNIH3Q8TBE1 160 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 CASTOR1Q8WTX7 329 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 IL17FQ96PD4 163 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 MCHR1Q99705 422 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 ZNF700Q9H0M5 742 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 TM9SF3Q9HD45 589 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 TEX13DA0A0J9YY54 714 aaPredicted RBP11.66□□□□□ -0.54
COL8A1-201ENST00000261037 HTR3EA5X5Y0 456 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 SLC33A1O00400 549 aaPredicted RBP11.66□□□□□ -0.54
COL8A1-201ENST00000261037 GALTP07902 379 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 RHOP08100 348 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 CKMT1AP12532 417 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 GADD45AP24522 165 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 ACRV1P26436 265 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 HNRNPA0Q13151 305 aaKnown RBP11.66□□□□□ -0.54
COL8A1-201ENST00000261037 C1orf189Q5VU69 101 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 TMEM107Q6UX40 140 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 OR51G2Q8NGK0 314 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 TMEM41AQ96HV5 264 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 REEP4Q9H6H4 257 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 RPF2Q9H7B2 306 aaKnown RBP11.66□□□□□ -0.54
COL8A1-201ENST00000261037 FNIP2Q9P278 1114 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 NCDNQ9UBB6 729 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 TRAV6A0A075B6T7 132 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 M0R036 132 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 E2F3O00716 465 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 UQCRC2P22695 453 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 DIO3P55073 304 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 PER3P56645 1201 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 SNTA1Q13424 505 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 SLC35G1Q2M3R5 365 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 ERMP1Q7Z2K6 904 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 NRROSQ86YC3 692 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 PDSS2Q86YH6 399 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 POGLUT1Q8NBL1 392 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 ASB12Q8WXK4 309 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 SORCS1Q8WY21 1168 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 ACOT12Q8WYK0 555 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 TMEM125Q96AQ2 219 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 C19orf25Q9UFG5 118 aaPredicted RBP11.66□□□□□ -0.54
COL8A1-201ENST00000261037 MLXQ9UH92 298 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 RNF6Q9Y252 685 aa11.66□□□□□ -0.54
COL8A1-201ENST00000261037 PIRO00625 290 aa11.65□□□□□ -0.54
COL8A1-201ENST00000261037 CAPN5O15484 640 aaPredicted RBP11.65□□□□□ -0.54
COL8A1-201ENST00000261037 AOC1P19801 751 aa11.65□□□□□ -0.54
COL8A1-201ENST00000261037 SLC9A3P48764 834 aa11.65□□□□□ -0.54
COL8A1-201ENST00000261037 PITX1P78337 314 aaPredicted RBP11.65□□□□□ -0.54
COL8A1-201ENST00000261037 GRB7Q14451 532 aa11.65□□□□□ -0.54
COL8A1-201ENST00000261037 NCEH1Q6PIU2 408 aa11.65□□□□□ -0.54
COL8A1-201ENST00000261037 ZNF283Q8N7M2 679 aa11.65□□□□□ -0.54
COL8A1-201ENST00000261037 ARHGAP9Q9BRR9 750 aa11.65□□□□□ -0.54
COL8A1-201ENST00000261037 SLC5A7Q9GZV3 580 aa11.65□□□□□ -0.54
COL8A1-201ENST00000261037 EHD1Q9H4M9 534 aa11.65□□□□□ -0.54
COL8A1-201ENST00000261037 SOX17Q9H6I2 414 aaPredicted RBP11.65□□□□□ -0.54
COL8A1-201ENST00000261037 PLCL2Q9UPR0 1127 aa11.65□□□□□ -0.54
COL8A1-201ENST00000261037 ALG5Q9Y673 324 aa11.65□□□□□ -0.54
COL8A1-201ENST00000261037 ARRB1P49407 418 aaPredicted RBP11.65□□□□□ -0.54
COL8A1-201ENST00000261037 PMS2P3Q13401 168 aa11.65□□□□□ -0.54
COL8A1-201ENST00000261037 C18orf21Q32NC0 220 aaPredicted RBP11.65□□□□□ -0.54
COL8A1-201ENST00000261037 ITPRIPL2Q3MIP1 535 aa11.65□□□□□ -0.54
COL8A1-201ENST00000261037 WDR45BQ5MNZ6 344 aa11.65□□□□□ -0.54
COL8A1-201ENST00000261037 ERN2Q76MJ5 926 aaKnown RBP11.65□□□□□ -0.54
COL8A1-201ENST00000261037 TAS1R3Q7RTX0 852 aa11.65□□□□□ -0.54
COL8A1-201ENST00000261037 ERI1Q8IV48 349 aaKnown RBP11.65□□□□□ -0.54
COL8A1-201ENST00000261037 TSACCQ96A04 125 aaPredicted RBP11.65□□□□□ -0.54
COL8A1-201ENST00000261037 IGSF21Q96ID5 467 aa11.65□□□□□ -0.54
COL8A1-201ENST00000261037 P2RY13Q9BPV8 354 aa11.65□□□□□ -0.54
COL8A1-201ENST00000261037 GJD2Q9UKL4 321 aa11.65□□□□□ -0.54
COL8A1-201ENST00000261037 CA14Q9ULX7 337 aa11.65□□□□□ -0.54
COL8A1-201ENST00000261037 C2orf74A8MZ97 194 aa11.65□□□□□ -0.54
COL8A1-201ENST00000261037 PROM1O43490 865 aa11.65□□□□□ -0.54
COL8A1-201ENST00000261037 C8BP07358 591 aa11.65□□□□□ -0.54
COL8A1-201ENST00000261037 ZNF805Q5CZA5 627 aa11.65□□□□□ -0.54
COL8A1-201ENST00000261037 FIP1L1Q6UN15 594 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms