RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 RUBCNLQ9H714 662 aa17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 KCNK12Q9HB15 430 aa17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 BLOC1S6Q9UL45 172 aa17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 WDR37Q9Y2I8 494 aa17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 GMPPBQ9Y5P6 360 aa17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 UGT2B11O75310 529 aa17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 JRKO75564 520 aa17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 INMTO95050 263 aa17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 FUCA1P04066 466 aa17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 PTX3P26022 381 aaPredicted RBP17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 CHI3L1P36222 383 aaPredicted RBP17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 GSSP48637 474 aa17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 ENTPD1P49961 510 aa17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 CLCNKAP51800 687 aa17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 IL18R1Q13478 541 aa17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 SCARB2Q14108 478 aa17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 C10orf62Q5T681 223 aaPredicted RBP17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 FAM46CQ5VWP2 391 aa17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 FAM124AQ86V42 546 aa17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 C17orf64Q86WR6 236 aa17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 CCDC71Q8IV32 467 aaPredicted RBP17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 RAB7BQ96AH8 199 aa17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 NODALQ96S42 347 aa17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 CSF3RQ99062 836 aa17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 MENTQ9BUN1 341 aa17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 ZNF717Q9BY31 904 aaPredicted RBP17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 NDUFAF4Q9P032 175 aa17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 C5AR2Q9P296 337 aa17.86■□□□□ 0.45
PDLIM4-201ENST00000253754 TRPM6Q9BX84 2022 aa17.85■□□□□ 0.45
PDLIM4-201ENST00000253754 A0A1W2PP55 124 aa17.85■□□□□ 0.45
PDLIM4-201ENST00000253754 A0A1W2PRB8 838 aa17.85■□□□□ 0.45
PDLIM4-201ENST00000253754 PRAMEF25A6NGN4 478 aa17.85■□□□□ 0.45
PDLIM4-201ENST00000253754 H7BY64 318 aa17.85■□□□□ 0.45
PDLIM4-201ENST00000253754 C9P02748 559 aa17.85■□□□□ 0.45
PDLIM4-201ENST00000253754 ZNF182P17025 639 aaPredicted RBP17.85■□□□□ 0.45
PDLIM4-201ENST00000253754 SELENOWP63302 87 aa17.85■□□□□ 0.45
PDLIM4-201ENST00000253754 GRSF1Q12849 480 aaKnown RBP eCLIP17.85■□□□□ 0.45
PDLIM4-201ENST00000253754 CYP2A13Q16696 494 aa17.85■□□□□ 0.45
PDLIM4-201ENST00000253754 METRNLQ641Q3 311 aa17.85■□□□□ 0.45
PDLIM4-201ENST00000253754 Q6ZPB1 254 aaPredicted RBP17.85■□□□□ 0.45
PDLIM4-201ENST00000253754 ZC3H7AQ8IWR0 971 aaKnown RBP17.85■□□□□ 0.45
PDLIM4-201ENST00000253754 KRT78Q8N1N4 520 aa17.85■□□□□ 0.45
PDLIM4-201ENST00000253754 DEFB123Q8N688 67 aa17.85■□□□□ 0.45
PDLIM4-201ENST00000253754 PRAP1Q96NZ9 151 aa17.85■□□□□ 0.45
PDLIM4-201ENST00000253754 MIEF1Q9NQG6 463 aa17.85■□□□□ 0.45
PDLIM4-201ENST00000253754 C1GALT1Q9NS00 363 aa17.85■□□□□ 0.45
PDLIM4-201ENST00000253754 TAS2R9Q9NYW1 312 aa17.85■□□□□ 0.45
PDLIM4-201ENST00000253754 ERVK-18Q9QC07 812 aa17.85■□□□□ 0.45
PDLIM4-201ENST00000253754 SNX8Q9Y5X2 465 aa17.85■□□□□ 0.45
PDLIM4-201ENST00000253754 PAK4O96013 591 aaPredicted RBP17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 PCMT1P22061 227 aa17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 FUT4P22083 530 aa17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 PRIM2P49643 509 aa17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 RPS26P62854 115 aaKnown RBP17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 PHEXP78562 749 aa17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 RPA4Q13156 261 aa17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 DCTN2Q13561 401 aaKnown RBP17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 FGL2Q14314 439 aa17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 TEAD4Q15561 434 aa17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 CST6Q15828 149 aa17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 FAHD1Q6P587 224 aa17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 DHRS4L2Q6PKH6 230 aa17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 PLD3Q8IV08 490 aa17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 SLC44A3Q8N4M1 653 aa17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 OR52J3Q8NH60 311 aa17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 UBE2E3Q969T4 207 aa17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 RSPH9Q9H1X1 276 aaPredicted RBP17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 SLAMF7Q9NQ25 335 aa17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 RASSF1Q9NS23 344 aa17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 WARS2Q9UGM6 360 aaKnown RBP17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 PADI2Q9Y2J8 665 aa17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 PIAS3Q9Y6X2 628 aa17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 EGFP01133 1207 aa17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 ERGP11308 486 aa17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 ACP5P13686 325 aa17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 LRRC74AQ0VAA2 488 aa17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 FOXD4Q12950 439 aaPredicted RBP17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 NFATC3Q12968 1075 aa17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 BNIP3Q12983 259 aa17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 TOP3AQ13472 1001 aaPredicted RBP17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 KEAP1Q14145 624 aa17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 IRF4Q15306 451 aa17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 KIAA1211LQ6NV74 962 aa17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 HDDC3Q8N4P3 179 aa17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 LINC01555Q8NAE3 123 aa17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 SMYD1Q8NB12 490 aa17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 TANKQ92844 425 aa17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 MUL1Q969V5 352 aa17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 OSGEPL1Q9H4B0 414 aa17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 CXorf36Q9H7Y0 433 aa17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 NDRG4Q9ULP0 352 aaKnown RBP17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 SNX5Q9Y5X3 404 aa17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 DOCK9Q9BZ29 2069 aa17.84■□□□□ 0.45
PDLIM4-201ENST00000253754 TRIM64BA6NI03 449 aa17.83■□□□□ 0.45
PDLIM4-201ENST00000253754 M0QX08 132 aa17.83■□□□□ 0.45
PDLIM4-201ENST00000253754 SCAMP1O15126 338 aa17.83■□□□□ 0.45
PDLIM4-201ENST00000253754 NOL3O60936 208 aaKnown RBP17.83■□□□□ 0.45
PDLIM4-201ENST00000253754 MAP2K4P45985 399 aa17.83■□□□□ 0.45
PDLIM4-201ENST00000253754 ALDH9A1P49189 494 aa17.83■□□□□ 0.45
PDLIM4-201ENST00000253754 GP2P55259 537 aaKnown RBP17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms