RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 A0A0G2JN53 185 aa12□□□□□ -0.49
VPREB3-201ENST00000248948 BLACEA4D250 179 aa12□□□□□ -0.49
VPREB3-201ENST00000248948 OR7A17O14581 309 aa12□□□□□ -0.49
VPREB3-201ENST00000248948 PRMT3O60678 531 aa12□□□□□ -0.49
VPREB3-201ENST00000248948 SEC24DO94855 1032 aaPredicted RBP12□□□□□ -0.49
VPREB3-201ENST00000248948 OTCP00480 354 aa12□□□□□ -0.49
VPREB3-201ENST00000248948 SHBGP04278 402 aa12□□□□□ -0.49
VPREB3-201ENST00000248948 HIST1H1TP22492 207 aaPredicted RBP12□□□□□ -0.49
VPREB3-201ENST00000248948 SSR2P43308 183 aa12□□□□□ -0.49
VPREB3-201ENST00000248948 CD97P48960 835 aa12□□□□□ -0.49
VPREB3-201ENST00000248948 CCNG1P51959 295 aa12□□□□□ -0.49
VPREB3-201ENST00000248948 HSD17B7P56937 341 aa12□□□□□ -0.49
VPREB3-201ENST00000248948 HERVK_113P63132 956 aa12□□□□□ -0.49
VPREB3-201ENST00000248948 FOXK1P85037 733 aa12□□□□□ -0.49
VPREB3-201ENST00000248948 TRAF3Q13114 568 aa12□□□□□ -0.49
VPREB3-201ENST00000248948 CUL3Q13618 768 aa12□□□□□ -0.49
VPREB3-201ENST00000248948 TERF2Q15554 542 aa12□□□□□ -0.49
VPREB3-201ENST00000248948 SFT2D3Q587I9 215 aa12□□□□□ -0.49
VPREB3-201ENST00000248948 B3GNTL1Q67FW5 361 aaPredicted RBP12□□□□□ -0.49
VPREB3-201ENST00000248948 PAPD4Q6PIY7 484 aaKnown RBP12□□□□□ -0.49
VPREB3-201ENST00000248948 SLC22A9Q8IVM8 553 aa12□□□□□ -0.49
VPREB3-201ENST00000248948 SCUBE1Q8IWY4 988 aa12□□□□□ -0.49
VPREB3-201ENST00000248948 ZNF595Q8IYB9 648 aa12□□□□□ -0.49
VPREB3-201ENST00000248948 IQCKQ8N0W5 287 aa12□□□□□ -0.49
VPREB3-201ENST00000248948 RIBC1Q8N443 379 aaPredicted RBP12□□□□□ -0.49
VPREB3-201ENST00000248948 Q8NA96 180 aa12□□□□□ -0.49
VPREB3-201ENST00000248948 OR52B6Q8NGF0 335 aa12□□□□□ -0.49
VPREB3-201ENST00000248948 WDR20Q8TBZ3 569 aa12□□□□□ -0.49
VPREB3-201ENST00000248948 BRIX1Q8TDN6 353 aaKnown RBP12□□□□□ -0.49
VPREB3-201ENST00000248948 PSMF1Q92530 271 aa12□□□□□ -0.49
VPREB3-201ENST00000248948 F2RL3Q96RI0 385 aa12□□□□□ -0.49
VPREB3-201ENST00000248948 LMF1Q96S06 567 aa12□□□□□ -0.49
VPREB3-201ENST00000248948 ERVK-6Q9BXR3 956 aa12□□□□□ -0.49
VPREB3-201ENST00000248948 TRIM4Q9C037 500 aa12□□□□□ -0.49
VPREB3-201ENST00000248948 RNF32Q9H0A6 362 aa12□□□□□ -0.49
VPREB3-201ENST00000248948 ILKAPQ9H0C8 392 aaPredicted RBP12□□□□□ -0.49
VPREB3-201ENST00000248948 NOL11Q9H8H0 719 aaKnown RBP12□□□□□ -0.49
VPREB3-201ENST00000248948 MMP25Q9NPA2 562 aa12□□□□□ -0.49
VPREB3-201ENST00000248948 PRDM7Q9NQW5 492 aa12□□□□□ -0.49
VPREB3-201ENST00000248948 PSD3Q9NYI0 1048 aa12□□□□□ -0.49
VPREB3-201ENST00000248948 TMEM216Q9P0N5 145 aa12□□□□□ -0.49
VPREB3-201ENST00000248948 TBK1Q9UHD2 729 aa12□□□□□ -0.49
VPREB3-201ENST00000248948 DAPP1Q9UN19 280 aa12□□□□□ -0.49
VPREB3-201ENST00000248948 STK38LQ9Y2H1 464 aa12□□□□□ -0.49
VPREB3-201ENST00000248948 SPACA6W5XKT8 324 aa12□□□□□ -0.49
VPREB3-201ENST00000248948 NBASA2RRP1 2371 aa11.99□□□□□ -0.49
VPREB3-201ENST00000248948 PRRC2CQ9Y520 2896 aaKnown RBP11.99□□□□□ -0.49
VPREB3-201ENST00000248948 IGHV3-20A0A0C4DH32 117 aa11.99□□□□□ -0.49
VPREB3-201ENST00000248948 SAGE2PA6NJ88 616 aa11.99□□□□□ -0.49
VPREB3-201ENST00000248948 FOXE1O00358 373 aaPredicted RBP11.99□□□□□ -0.49
VPREB3-201ENST00000248948 CLDN4O14493 209 aa11.99□□□□□ -0.49
VPREB3-201ENST00000248948 B4GALT2O60909 372 aa11.99□□□□□ -0.49
VPREB3-201ENST00000248948 DNAJB6O75190 326 aa11.99□□□□□ -0.49
VPREB3-201ENST00000248948 SEMA3DO95025 777 aa11.99□□□□□ -0.49
VPREB3-201ENST00000248948 UQCRHP07919 91 aa11.99□□□□□ -0.49
VPREB3-201ENST00000248948 PYGBP11216 843 aa11.99□□□□□ -0.49
VPREB3-201ENST00000248948 MAOAP21397 527 aa11.99□□□□□ -0.49
VPREB3-201ENST00000248948 ATP5F1P24539 256 aaPredicted RBP11.99□□□□□ -0.49
VPREB3-201ENST00000248948 HSD17B3P37058 310 aa11.99□□□□□ -0.49
VPREB3-201ENST00000248948 ARL1P40616 181 aaPredicted RBP11.99□□□□□ -0.49
VPREB3-201ENST00000248948 RAP1GDS1P52306 607 aa11.99□□□□□ -0.49
VPREB3-201ENST00000248948 LIM2P55344 173 aa11.99□□□□□ -0.49
VPREB3-201ENST00000248948 OR4D2P58180 307 aa11.99□□□□□ -0.49
VPREB3-201ENST00000248948 DDX39BQ13838 428 aaKnown RBP11.99□□□□□ -0.49
VPREB3-201ENST00000248948 RUNX2Q13950 521 aa11.99□□□□□ -0.49
VPREB3-201ENST00000248948 BTBD16Q32M84 506 aa11.99□□□□□ -0.49
VPREB3-201ENST00000248948 DEPDC1Q5TB30 811 aa11.99□□□□□ -0.49
VPREB3-201ENST00000248948 ZNF793Q6ZN11 406 aa11.99□□□□□ -0.49
VPREB3-201ENST00000248948 UBE3DQ7Z6J8 389 aa11.99□□□□□ -0.49
VPREB3-201ENST00000248948 LGI4Q8N135 537 aa11.99□□□□□ -0.49
VPREB3-201ENST00000248948 ZCCHC7Q8N3Z6 543 aaKnown RBP11.99□□□□□ -0.49
VPREB3-201ENST00000248948 FAM47BQ8NA70 645 aa11.99□□□□□ -0.49
VPREB3-201ENST00000248948 C7orf57Q8NEG2 295 aa11.99□□□□□ -0.49
VPREB3-201ENST00000248948 M1APQ8TC57 530 aa11.99□□□□□ -0.49
VPREB3-201ENST00000248948 EPS8L3Q8TE67 593 aaKnown RBP11.99□□□□□ -0.49
VPREB3-201ENST00000248948 AENQ8WTP8 325 aaKnown RBP11.99□□□□□ -0.49
VPREB3-201ENST00000248948 CAVIN3Q969G5 261 aa11.99□□□□□ -0.49
VPREB3-201ENST00000248948 ATP6V1E2Q96A05 226 aa11.99□□□□□ -0.49
VPREB3-201ENST00000248948 MIB2Q96AX9 1013 aa11.99□□□□□ -0.49
VPREB3-201ENST00000248948 CCDC126Q96EE4 140 aa11.99□□□□□ -0.49
VPREB3-201ENST00000248948 PTCHD1Q96NR3 888 aa11.99□□□□□ -0.49
VPREB3-201ENST00000248948 ZBTB20Q9HC78 741 aaPredicted RBP11.99□□□□□ -0.49
VPREB3-201ENST00000248948 ZBTB26Q9HCK0 441 aa11.99□□□□□ -0.49
VPREB3-201ENST00000248948 PRM3Q9NNZ6 103 aa11.99□□□□□ -0.49
VPREB3-201ENST00000248948 SLAMF7Q9NQ25 335 aa11.99□□□□□ -0.49
VPREB3-201ENST00000248948 TRPS1Q9UHF7 1281 aa11.99□□□□□ -0.49
VPREB3-201ENST00000248948 DCDC2Q9UHG0 476 aa11.99□□□□□ -0.49
VPREB3-201ENST00000248948 TEKT2Q9UIF3 430 aa11.99□□□□□ -0.49
VPREB3-201ENST00000248948 CNTRLQ7Z7A1 2325 aa11.99□□□□□ -0.49
VPREB3-201ENST00000248948 OR2W5A6NFC9 320 aa11.98□□□□□ -0.49
VPREB3-201ENST00000248948 TTLL8A6PVC2 850 aa11.98□□□□□ -0.49
VPREB3-201ENST00000248948 GOLGA8RI6L899 631 aa11.98□□□□□ -0.49
VPREB3-201ENST00000248948 PLPP1O14494 284 aa11.98□□□□□ -0.49
VPREB3-201ENST00000248948 CDK2AP1O14519 115 aa11.98□□□□□ -0.49
VPREB3-201ENST00000248948 WISP1O95388 367 aa11.98□□□□□ -0.49
VPREB3-201ENST00000248948 TGFB1P01137 390 aa11.98□□□□□ -0.49
VPREB3-201ENST00000248948 CELA2AP08217 269 aa11.98□□□□□ -0.49
VPREB3-201ENST00000248948 ITGAMP11215 1152 aa11.98□□□□□ -0.49
VPREB3-201ENST00000248948 KRT15P19012 456 aa11.98□□□□□ -0.49
VPREB3-201ENST00000248948 ATP5A1P25705 553 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms