RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 MAP3K7O43318 606 aa12.58□□□□□ -0.4
SLIRP-201ENST00000238688 ABCB1P08183 1280 aaPredicted RBP12.58□□□□□ -0.4
SLIRP-201ENST00000238688 CDK4P11802 303 aa12.58□□□□□ -0.4
SLIRP-201ENST00000238688 FCGR1AP12314 374 aa12.58□□□□□ -0.4
SLIRP-201ENST00000238688 DRD2P14416 443 aa12.58□□□□□ -0.4
SLIRP-201ENST00000238688 ANPEPP15144 967 aa12.58□□□□□ -0.4
SLIRP-201ENST00000238688 CD1EP15812 388 aa12.58□□□□□ -0.4
SLIRP-201ENST00000238688 JUNDP17535 347 aa12.58□□□□□ -0.4
SLIRP-201ENST00000238688 ZNF10P21506 573 aaPredicted RBP12.58□□□□□ -0.4
SLIRP-201ENST00000238688 AK4P27144 223 aaPredicted RBP12.58□□□□□ -0.4
SLIRP-201ENST00000238688 RAE1P78406 368 aaKnown RBP12.58□□□□□ -0.4
SLIRP-201ENST00000238688 TARDBPQ13148 414 aaKnown RBP eCLIP12.58□□□□□ -0.4
SLIRP-201ENST00000238688 PLCL1Q15111 1095 aa12.58□□□□□ -0.4
SLIRP-201ENST00000238688 SF1Q15637 639 aaKnown RBP12.58□□□□□ -0.4
SLIRP-201ENST00000238688 ZIC1Q15915 447 aa12.58□□□□□ -0.4
SLIRP-201ENST00000238688 C6orf10Q5SRN2 563 aa12.58□□□□□ -0.4
SLIRP-201ENST00000238688 FAM71E1Q6IPT2 247 aa12.58□□□□□ -0.4
SLIRP-201ENST00000238688 ERICH5Q6P6B1 374 aa12.58□□□□□ -0.4
SLIRP-201ENST00000238688 TAF8Q7Z7C8 310 aa12.58□□□□□ -0.4
SLIRP-201ENST00000238688 ADGRF3Q8IZF5 1079 aa12.58□□□□□ -0.4
SLIRP-201ENST00000238688 CARFQ8N187 725 aa12.58□□□□□ -0.4
SLIRP-201ENST00000238688 CACTIN-AS1Q8N1I8 211 aa12.58□□□□□ -0.4
SLIRP-201ENST00000238688 ZNF655Q8N720 491 aaPredicted RBP12.58□□□□□ -0.4
SLIRP-201ENST00000238688 GOT1L1Q8NHS2 421 aaPredicted RBP12.58□□□□□ -0.4
SLIRP-201ENST00000238688 PRAP1Q96NZ9 151 aa12.58□□□□□ -0.4
SLIRP-201ENST00000238688 KCNC2Q96PR1 638 aa12.58□□□□□ -0.4
SLIRP-201ENST00000238688 ECSITQ9BQ95 431 aa12.58□□□□□ -0.4
SLIRP-201ENST00000238688 TBCDQ9BTW9 1192 aa12.58□□□□□ -0.4
SLIRP-201ENST00000238688 DUSP26Q9BV47 211 aa12.58□□□□□ -0.4
SLIRP-201ENST00000238688 ACAT2Q9BWD1 397 aa12.58□□□□□ -0.4
SLIRP-201ENST00000238688 TCEAL2Q9H3H9 227 aaPredicted RBP12.58□□□□□ -0.4
SLIRP-201ENST00000238688 DDX31Q9H8H2 851 aaKnown RBP12.58□□□□□ -0.4
SLIRP-201ENST00000238688 C8orf4Q9NR00 106 aa12.58□□□□□ -0.4
SLIRP-201ENST00000238688 CMTM6Q9NX76 183 aa12.58□□□□□ -0.4
SLIRP-201ENST00000238688 TAS2R7Q9NYW3 318 aa12.58□□□□□ -0.4
SLIRP-201ENST00000238688 ZNF282Q9UDV7 671 aaPredicted RBP12.58□□□□□ -0.4
SLIRP-201ENST00000238688 CIDEBQ9UHD4 219 aa12.58□□□□□ -0.4
SLIRP-201ENST00000238688 PLEKHM1Q9Y4G2 1056 aa12.58□□□□□ -0.4
SLIRP-201ENST00000238688 PCDHGA4Q9Y5G9 962 aa12.58□□□□□ -0.4
SLIRP-201ENST00000238688 CSNK1G3Q9Y6M4 447 aa12.58□□□□□ -0.4
SLIRP-201ENST00000238688 OR2A25A4D2G3 310 aa12.57□□□□□ -0.4
SLIRP-201ENST00000238688 ISM1B1AKI9 464 aa12.57□□□□□ -0.4
SLIRP-201ENST00000238688 CASQ2O14958 399 aaPredicted RBP12.57□□□□□ -0.4
SLIRP-201ENST00000238688 OR1F1O43749 312 aa12.57□□□□□ -0.4
SLIRP-201ENST00000238688 KRT36O76013 467 aa12.57□□□□□ -0.4
SLIRP-201ENST00000238688 SCELO95171 688 aa12.57□□□□□ -0.4
SLIRP-201ENST00000238688 ETHE1O95571 254 aa12.57□□□□□ -0.4
SLIRP-201ENST00000238688 CKMT1AP12532 417 aa12.57□□□□□ -0.4
SLIRP-201ENST00000238688 HOXB3P14651 431 aaPredicted RBP12.57□□□□□ -0.4
SLIRP-201ENST00000238688 IL1RNP18510 177 aa12.57□□□□□ -0.4
SLIRP-201ENST00000238688 TACR1P25103 407 aa12.57□□□□□ -0.4
SLIRP-201ENST00000238688 SLC7A1P30825 629 aa12.57□□□□□ -0.4
SLIRP-201ENST00000238688 GSK3BP49841 420 aa12.57□□□□□ -0.4
SLIRP-201ENST00000238688 TXNL4AP83876 142 aaKnown RBP12.57□□□□□ -0.4
SLIRP-201ENST00000238688 LIPEQ05469 1076 aa12.57□□□□□ -0.4
SLIRP-201ENST00000238688 RGS1Q08116 209 aa12.57□□□□□ -0.4
SLIRP-201ENST00000238688 ABHD18Q0P651 414 aa12.57□□□□□ -0.4
SLIRP-201ENST00000238688 UGT8Q16880 541 aa12.57□□□□□ -0.4
SLIRP-201ENST00000238688 RUNDC3AQ59EK9 446 aa12.57□□□□□ -0.4
SLIRP-201ENST00000238688 CDCP2Q5VXM1 449 aa12.57□□□□□ -0.4
SLIRP-201ENST00000238688 NIPAL1Q6NVV3 410 aa12.57□□□□□ -0.4
SLIRP-201ENST00000238688 SLC2A7Q6PXP3 512 aa12.57□□□□□ -0.4
SLIRP-201ENST00000238688 C19orf48Q6RUI8 117 aa12.57□□□□□ -0.4
SLIRP-201ENST00000238688 TMEM26Q6ZUK4 368 aa12.57□□□□□ -0.4
SLIRP-201ENST00000238688 VN1R5Q7Z5H4 357 aa12.57□□□□□ -0.4
SLIRP-201ENST00000238688 SERPINA11Q86U17 422 aa12.57□□□□□ -0.4
SLIRP-201ENST00000238688 PAQR7Q86WK9 346 aa12.57□□□□□ -0.4
SLIRP-201ENST00000238688 OOSP2Q86WS3 158 aa12.57□□□□□ -0.4
SLIRP-201ENST00000238688 ZCCHC7Q8N3Z6 543 aaKnown RBP12.57□□□□□ -0.4
SLIRP-201ENST00000238688 KRTCAP2Q8N6L1 136 aa12.57□□□□□ -0.4
SLIRP-201ENST00000238688 FAM181AQ8N9Y4 354 aa12.57□□□□□ -0.4
SLIRP-201ENST00000238688 ZNF548Q8NEK5 533 aaPredicted RBP12.57□□□□□ -0.4
SLIRP-201ENST00000238688 BHLHE22Q8NFJ8 381 aaPredicted RBP12.57□□□□□ -0.4
SLIRP-201ENST00000238688 NT5CQ8TCD5 201 aa12.57□□□□□ -0.4
SLIRP-201ENST00000238688 RSRC1Q96IZ7 334 aaKnown RBP12.57□□□□□ -0.4
SLIRP-201ENST00000238688 DPH7Q9BTV6 452 aa12.57□□□□□ -0.4
SLIRP-201ENST00000238688 FAIM2Q9BWQ8 316 aa12.57□□□□□ -0.4
SLIRP-201ENST00000238688 REXO4Q9GZR2 422 aaKnown RBP12.57□□□□□ -0.4
SLIRP-201ENST00000238688 CHRNA10Q9GZZ6 450 aa12.57□□□□□ -0.4
SLIRP-201ENST00000238688 PAIP1Q9H074 479 aaKnown RBP12.57□□□□□ -0.4
SLIRP-201ENST00000238688 ABCG4Q9H172 646 aa12.57□□□□□ -0.4
SLIRP-201ENST00000238688 NEUROD4Q9HD90 331 aa12.57□□□□□ -0.4
SLIRP-201ENST00000238688 PRM3Q9NNZ6 103 aa12.57□□□□□ -0.4
SLIRP-201ENST00000238688 SERHLQ9NQF3 203 aa12.57□□□□□ -0.4
SLIRP-201ENST00000238688 ARMC1Q9NVT9 282 aa12.57□□□□□ -0.4
SLIRP-201ENST00000238688 CUEDC1Q9NWM3 386 aaPredicted RBP12.57□□□□□ -0.4
SLIRP-201ENST00000238688 NLGN3Q9NZ94 848 aa12.57□□□□□ -0.4
SLIRP-201ENST00000238688 PCDHGB4Q9UN71 923 aa12.57□□□□□ -0.4
SLIRP-201ENST00000238688 LHX6Q9UPM6 363 aa12.57□□□□□ -0.4
SLIRP-201ENST00000238688 IGSF10Q6WRI0 2623 aa12.57□□□□□ -0.4
SLIRP-201ENST00000238688 IGKV1-8A0A0C4DH67 115 aa12.56□□□□□ -0.4
SLIRP-201ENST00000238688 LRIT2A6NDA9 550 aa12.56□□□□□ -0.4
SLIRP-201ENST00000238688 FAM220BPB1ANY3 271 aa12.56□□□□□ -0.4
SLIRP-201ENST00000238688 LMO7DNF2Z398 122 aa12.56□□□□□ -0.4
SLIRP-201ENST00000238688 TXNDC9O14530 226 aa12.56□□□□□ -0.4
SLIRP-201ENST00000238688 ZW10O43264 779 aa12.56□□□□□ -0.4
SLIRP-201ENST00000238688 TLX3O43711 291 aaPredicted RBP12.56□□□□□ -0.4
SLIRP-201ENST00000238688 PEX1O43933 1283 aa12.56□□□□□ -0.4
SLIRP-201ENST00000238688 SCN2BO60939 215 aa12.56□□□□□ -0.4
SLIRP-201ENST00000238688 TGFB1P01137 390 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms