RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 TMEM135Q86UB9 458 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 KBTBD6Q86V97 674 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 MLXQ9UH92 298 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 HTR3EA5X5Y0 456 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 J3QRK9 145 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 KHNYNO15037 678 aaKnown RBP13.07□□□□□ -0.32
SF3A1-201ENST00000215793 LEFTY1O75610 366 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 HCKP08631 526 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 CCL5P13501 91 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 HLA-EP13747 358 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 SHPRHQ149N8 1683 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 SLC22A16Q86VW1 577 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 FBXL8Q96CD0 374 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 MRGPRX2Q96LB1 330 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 CMAHPQ9Y471 501 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 PCDHB3Q9Y5E6 796 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 A0A1W2PPW3 197 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 HYKKA2RU49 373 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 HPRP00739 348 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 TIA1P31483 386 aaKnown RBP eCLIP13.07□□□□□ -0.32
SF3A1-201ENST00000215793 HNF1BP35680 557 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 ARPC4P59998 168 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 KCNAB2Q13303 367 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 ZNF267Q14586 743 aaPredicted RBP13.07□□□□□ -0.32
SF3A1-201ENST00000215793 SYCE2Q6PIF2 218 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 FIP1L1Q6UN15 594 aaKnown RBP13.07□□□□□ -0.32
SF3A1-201ENST00000215793 SLC37A3Q8NCC5 494 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 OR4C15Q8NGM1 316 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 SNIP1Q8TAD8 396 aaKnown RBP13.07□□□□□ -0.32
SF3A1-201ENST00000215793 LMX1AQ8TE12 382 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 TMEM234Q8WY98 164 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 OR8D2Q9GZM6 311 aa13.07□□□□□ -0.32
SF3A1-201ENST00000215793 CCM2LQ9NUG4 571 aaPredicted RBP13.07□□□□□ -0.32
SF3A1-201ENST00000215793 FAAHO00519 579 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 PFKLP17858 780 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 PROZP22891 400 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 WDR45BQ5MNZ6 344 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 RPL13AP3Q6NVV1 102 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 GOLM1Q8NBJ4 401 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 TMIEQ8NEW7 156 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 OR2L2Q8NH16 312 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 NSMAFQ92636 917 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 OR2M4Q96R27 311 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 DOHHQ9BU89 302 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 HRASLS2Q9NWW9 162 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 HCN2Q9UL51 889 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 C14orf166Q9Y224 244 aaKnown RBP13.06□□□□□ -0.32
SF3A1-201ENST00000215793 FXYD6-FXYD2A0A087WZ82 144 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 C2orf74A8MZ97 194 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 TSPAN4O14817 238 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 ZNF821O75541 412 aaPredicted RBP13.06□□□□□ -0.32
SF3A1-201ENST00000215793 ASGR2P07307 311 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 DCKP27707 260 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 RPS3AP61247 264 aaKnown RBP13.06□□□□□ -0.32
SF3A1-201ENST00000215793 CD83Q01151 205 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 ZNF45Q02386 682 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 PTGR1Q14914 329 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 CARM1Q86X55 608 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 ZNF565Q8N9K5 539 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 SCAMP4Q969E2 229 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 WACQ9BTA9 647 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 G6PC3Q9BUM1 346 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 FXYD6Q9H0Q3 95 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 TMEM165Q9HC07 324 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 ENAMQ9NRM1 1142 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 DZANK1Q9NVP4 752 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 PLEKHA6Q9Y2H5 1048 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 NOP16Q9Y3C1 178 aaKnown RBP13.06□□□□□ -0.32
SF3A1-201ENST00000215793 ZSCAN5BA6NJL1 495 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 OR5K4A6NMS3 321 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 DISC1C4P0D8 188 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 KDELR2P33947 212 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 TMBIM6P55061 237 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 JAG1P78504 1218 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 SCAPQ12770 1279 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 PRRT3Q5FWE3 981 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 ANKRD26P1Q6NSI1 321 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 KCTD18Q6PI47 426 aaPredicted RBP13.06□□□□□ -0.32
SF3A1-201ENST00000215793 MFSD2AQ8NA29 543 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.06□□□□□ -0.32
SF3A1-201ENST00000215793 ORAI3Q9BRQ5 295 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 CCDC106Q9BWC9 280 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 SPHK2Q9NRA0 654 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 UCKL1Q9NWZ5 548 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 ABCD2Q9UBJ2 740 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 PLAGL1Q9UM63 463 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 SPEF2Q9C093 1822 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 LTBP3Q9NS15 1303 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 TEX13DA0A0J9YY54 714 aaPredicted RBP13.06□□□□□ -0.32
SF3A1-201ENST00000215793 SOX1O00570 391 aaPredicted RBP13.06□□□□□ -0.32
SF3A1-201ENST00000215793 TSPAN6O43657 245 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 VEGFDO43915 354 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 CLEC3AO75596 197 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 SLITRK5O94991 958 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 TRAM1Q15629 374 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 PPP1R3AQ16821 1122 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 FLYWCH1Q4VC44 716 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 ZNF367Q7RTV3 350 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 TREML1Q86YW5 311 aa13.06□□□□□ -0.32
SF3A1-201ENST00000215793 ZSCAN4Q8NAM6 433 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms