RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 MmachcQ9CZD0 279 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Mettl9Q9EPL4 318 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Tlr1Q9EPQ1 795 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 LratQ9JI60 231 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Oaz3Q9R109 243 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Dgat1Q9Z2A7 498 aa8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Ybx2Q9Z2C8 360 aaKnown RBP8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Znfx1Q8R151 1909 aaKnown RBP8.7□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Gm38392E9Q2A2 434 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 SprtnG3X912 497 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 4933406M09RikG3XA12 479 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Vmn2r70K7N702 854 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Efna5O08543 228 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Rgs5O08850 181 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Tp53P02340 387 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Ubl4aP21126 157 aaKnown RBP8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Ddx6P54823 483 aaKnown RBP8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Tyro3P55144 880 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Terf1P70371 421 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Gpr15Q0VDU3 360 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Zfp217Q3U0X6 1041 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Fbxl7Q5BJ29 491 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Csnk2a1Q60737 391 aaKnown RBP8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Krt40Q6IFX3 439 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Mgat4bQ812F8 548 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Mettl2Q8BMK1 389 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Elmo1Q8BPU7 727 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 RhbgQ8BUX5 455 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 DrgxQ8BYH0 263 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Nsun3Q8CCT7 348 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Osbpl11Q8CI95 751 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Lrrc14Q8VC16 493 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Tas1r2Q925I4 843 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Yaf2Q99LW6 179 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 MrgprhQ99MT8 321 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 CinpQ9D0V8 212 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Thap2Q9D305 217 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Q9D9D9 101 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Rnf6Q9DBU5 667 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Vmn1r53Q9EP93 310 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Tfcp2Q9ERA0 502 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Tmem47Q9JJG6 181 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Arl6ip1Q9JKW0 203 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Scgb2b11A0A087WR49 112 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Gm4881A0A140LIR9 352 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Olfr1436A0PK57 315 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Ttll2A4Q9E4 540 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Gm45711E0CXA2 391 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Fth1P09528 182 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Adh5P28474 374 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Rab17P35292 214 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 PorP37040 678 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Zdhhc2P59267 366 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Pip5k1aP70182 546 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Zscan2Q07230 614 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Kcnma1Q08460 1209 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Mettl4Q3U034 471 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Gpsm3Q3U1Z5 159 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Snx21Q3UR97 363 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Syce1lQ5D525 247 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Fam20cQ5MJS3 579 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Havcr1Q5QNS5 305 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Khdrbs1Q60749 443 aaKnown RBP8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 ShbQ6PD21 503 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Olfr1308Q7TQX0 320 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Prr11Q8BHE0 368 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Phactr3Q8BYK5 558 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Fmo9Q8C116 539 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Lrrn3Q8CBC6 707 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Riox2Q8CD15 465 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Thoc3Q8VE80 351 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Olfr1330Q8VEY6 315 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Olfr444Q8VFS6 310 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Stard13Q923Q2 1113 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Olfr642Q924X8 314 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Trps1Q925H1 1281 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Med24Q99K74 987 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Gid8Q9D7M1 228 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 TsaccQ9DA44 124 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Psg21Q9DAV5 471 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Ddx59Q9DBN9 619 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Acss2Q9QXG4 701 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Khdrbs3Q9R226 346 aaKnown RBP8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Hao1Q9WU19 370 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Mast3Q3U214 1321 aa8.69□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Ecm29Q6PDI5 1840 aa8.68□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Gm4858A0A0A6YWS7 318 aa8.68□□□□□ -1.02
Upf3b-201ENSMUST00000076265 1700025C18RikA2A580 89 aa8.68□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Cacna2d1O08532 1103 aa8.68□□□□□ -1.02
Upf3b-201ENSMUST00000076265 P01653 108 aa8.68□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Acod1P54987 488 aa8.68□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Rce1P57791 329 aa8.68□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Aup1P70295 410 aa8.68□□□□□ -1.02
Upf3b-201ENSMUST00000076265 1700061G19RikQ08EE8 705 aa8.68□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Dnajb14Q149L6 379 aa8.68□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Lemd2Q6DVA0 511 aa8.68□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Pja2Q80U04 707 aa8.68□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Trim69Q80X56 500 aa8.68□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Rnf41Q8BH75 317 aa8.68□□□□□ -1.02
Upf3b-201ENSMUST00000076265 Slc35e2Q8C811 405 aa8.68□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 34.2 ms