RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 PADI2Q9Y2J8 665 aa16.11■□□□□ 0.17
PHGDH-223ENST00000641597 TMEM98Q9Y2Y6 226 aa16.11■□□□□ 0.17
PHGDH-223ENST00000641597 TRIM43BA6NCK2 446 aa16.11■□□□□ 0.17
PHGDH-223ENST00000641597 MMP20O60882 483 aa16.11■□□□□ 0.17
PHGDH-223ENST00000641597 SERPINB7O75635 380 aa16.11■□□□□ 0.17
PHGDH-223ENST00000641597 PTHP01270 115 aa16.11■□□□□ 0.17
PHGDH-223ENST00000641597 ADH1AP07327 375 aa16.11■□□□□ 0.17
PHGDH-223ENST00000641597 IL3P08700 152 aa16.11■□□□□ 0.17
PHGDH-223ENST00000641597 HSMCR30P0CW71 290 aa16.11■□□□□ 0.17
PHGDH-223ENST00000641597 SLC13A2Q13183 592 aa16.11■□□□□ 0.17
PHGDH-223ENST00000641597 DUSP7Q16829 419 aa16.11■□□□□ 0.17
PHGDH-223ENST00000641597 INAVAQ3KP66 663 aa16.11■□□□□ 0.17
PHGDH-223ENST00000641597 SPIN4Q56A73 249 aa16.11■□□□□ 0.17
PHGDH-223ENST00000641597 DPPA4Q7L190 304 aa16.11■□□□□ 0.17
PHGDH-223ENST00000641597 C16orf78Q8WTQ4 265 aa16.11■□□□□ 0.17
PHGDH-223ENST00000641597 ATL1Q8WXF7 558 aa16.11■□□□□ 0.17
PHGDH-223ENST00000641597 TRIM43Q96BQ3 446 aaPredicted RBP16.11■□□□□ 0.17
PHGDH-223ENST00000641597 ZHX1-C8orf76Q96EF9 292 aa16.11■□□□□ 0.17
PHGDH-223ENST00000641597 WFDC6Q9BQY6 131 aa16.11■□□□□ 0.17
PHGDH-223ENST00000641597 SNX11Q9Y5W9 270 aa16.11■□□□□ 0.17
PHGDH-223ENST00000641597 ALPK3Q96L96 1907 aa16.11■□□□□ 0.17
PHGDH-223ENST00000641597 PTPRSQ13332 1948 aa16.1■□□□□ 0.17
PHGDH-223ENST00000641597 MTCL1Q9Y4B5 1905 aaKnown RBP16.1■□□□□ 0.17
PHGDH-223ENST00000641597 RNASET2O00584 256 aaKnown RBP16.1■□□□□ 0.17
PHGDH-223ENST00000641597 RECKO95980 971 aa16.1■□□□□ 0.17
PHGDH-223ENST00000641597 STATHP02808 62 aa16.1■□□□□ 0.17
PHGDH-223ENST00000641597 CHI3L1P36222 383 aaPredicted RBP16.1■□□□□ 0.17
PHGDH-223ENST00000641597 ASMTP46597 345 aa16.1■□□□□ 0.17
PHGDH-223ENST00000641597 CBX3Q13185 183 aa16.1■□□□□ 0.17
PHGDH-223ENST00000641597 HIST2H2ACQ16777 129 aaPredicted RBP16.1■□□□□ 0.17
PHGDH-223ENST00000641597 CCDC149Q6ZUS6 474 aa16.1■□□□□ 0.17
PHGDH-223ENST00000641597 VN1R5Q7Z5H4 357 aa16.1■□□□□ 0.17
PHGDH-223ENST00000641597 WDR53Q7Z5U6 358 aaPredicted RBP16.1■□□□□ 0.17
PHGDH-223ENST00000641597 GRASPQ7Z6J2 395 aaPredicted RBP16.1■□□□□ 0.17
PHGDH-223ENST00000641597 PSMA8Q8TAA3 256 aa16.1■□□□□ 0.17
PHGDH-223ENST00000641597 PPCDCQ96CD2 204 aa16.1■□□□□ 0.17
PHGDH-223ENST00000641597 GABARAPL3Q9BY60 117 aa16.1■□□□□ 0.17
PHGDH-223ENST00000641597 SLC6A16Q9GZN6 736 aa16.1■□□□□ 0.17
PHGDH-223ENST00000641597 OR51E2Q9H255 320 aa16.1■□□□□ 0.17
PHGDH-223ENST00000641597 DCSTAMPQ9H295 470 aa16.1■□□□□ 0.17
PHGDH-223ENST00000641597 PALMDQ9NP74 551 aa16.1■□□□□ 0.17
PHGDH-223ENST00000641597 NECTIN3Q9NQS3 549 aa16.1■□□□□ 0.17
PHGDH-223ENST00000641597 C1GALT1Q9NS00 363 aa16.1■□□□□ 0.17
PHGDH-223ENST00000641597 TM7SF3Q9NS93 570 aa16.1■□□□□ 0.17
PHGDH-223ENST00000641597 PCDHGA2Q9Y5H1 932 aa16.1■□□□□ 0.17
PHGDH-223ENST00000641597 NUMA1Q14980 2115 aa16.1■□□□□ 0.17
PHGDH-223ENST00000641597 ABHD14A-ACY1A0A1B0GW23 586 aa16.1■□□□□ 0.17
PHGDH-223ENST00000641597 OTOL1A6NHN0 477 aaPredicted RBP16.1■□□□□ 0.17
PHGDH-223ENST00000641597 WASHC1A8K0Z3 465 aa16.1■□□□□ 0.17
PHGDH-223ENST00000641597 E9PQ18 207 aa16.1■□□□□ 0.17
PHGDH-223ENST00000641597 LILRB5O75023 590 aa16.1■□□□□ 0.17
PHGDH-223ENST00000641597 DNTTP04053 509 aa16.1■□□□□ 0.17
PHGDH-223ENST00000641597 DBTP11182 482 aaKnown RBP16.1■□□□□ 0.17
PHGDH-223ENST00000641597 PORP16435 677 aaPredicted RBP16.1■□□□□ 0.17
PHGDH-223ENST00000641597 C21orf58P58505 322 aa16.1■□□□□ 0.17
PHGDH-223ENST00000641597 ZNF77Q15935 545 aa16.1■□□□□ 0.17
PHGDH-223ENST00000641597 DGUOKQ16854 277 aa16.1■□□□□ 0.17
PHGDH-223ENST00000641597 ZNF658BQ4V348 819 aaPredicted RBP16.1■□□□□ 0.17
PHGDH-223ENST00000641597 RAET1GQ6H3X3 334 aa16.1■□□□□ 0.17
PHGDH-223ENST00000641597 WASH2PQ6VEQ5 465 aa16.1■□□□□ 0.17
PHGDH-223ENST00000641597 PLD3Q8IV08 490 aa16.1■□□□□ 0.17
PHGDH-223ENST00000641597 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.1■□□□□ 0.17
PHGDH-223ENST00000641597 DNAJC22Q8N4W6 341 aa16.1■□□□□ 0.17
PHGDH-223ENST00000641597 OR4C15Q8NGM1 316 aa16.1■□□□□ 0.17
PHGDH-223ENST00000641597 FOPNLQ96NB1 174 aa16.1■□□□□ 0.17
PHGDH-223ENST00000641597 SLAMF7Q9NQ25 335 aa16.1■□□□□ 0.17
PHGDH-223ENST00000641597 PSORS1C1Q9UIG5 152 aa16.1■□□□□ 0.17
PHGDH-223ENST00000641597 HSPE1-MOB4S4R3N1 261 aa16.1■□□□□ 0.17
PHGDH-223ENST00000641597 TRANK1O15050 2925 aa16.09■□□□□ 0.17
PHGDH-223ENST00000641597 PRRT4C9JH25 899 aa16.09■□□□□ 0.17
PHGDH-223ENST00000641597 TLL1O43897 1013 aa16.09■□□□□ 0.17
PHGDH-223ENST00000641597 EPCAMP16422 314 aa16.09■□□□□ 0.17
PHGDH-223ENST00000641597 IRS1P35568 1242 aa16.09■□□□□ 0.17
PHGDH-223ENST00000641597 GGT2P36268 569 aa16.09■□□□□ 0.17
PHGDH-223ENST00000641597 FEN1P39748 380 aaKnown RBP16.09■□□□□ 0.17
PHGDH-223ENST00000641597 COLEC12Q5KU26 742 aa16.09■□□□□ 0.17
PHGDH-223ENST00000641597 GCNT6Q5T4J0 391 aa16.09■□□□□ 0.17
PHGDH-223ENST00000641597 ANXA8L1Q5VT79 327 aa16.09■□□□□ 0.17
PHGDH-223ENST00000641597 NIPAL1Q6NVV3 410 aa16.09■□□□□ 0.17
PHGDH-223ENST00000641597 TNFAIP8L2Q6P589 184 aaPredicted RBP16.09■□□□□ 0.17
PHGDH-223ENST00000641597 TRIM73Q86UV7 250 aa16.09■□□□□ 0.17
PHGDH-223ENST00000641597 CADM3Q8N126 398 aa16.09■□□□□ 0.17
PHGDH-223ENST00000641597 OR5AR1Q8NGP9 310 aa16.09■□□□□ 0.17
PHGDH-223ENST00000641597 OTUB1Q96FW1 271 aaPredicted RBP16.09■□□□□ 0.17
PHGDH-223ENST00000641597 VMP1Q96GC9 406 aa16.09■□□□□ 0.17
PHGDH-223ENST00000641597 A0A0G2JN53 185 aa16.09■□□□□ 0.17
PHGDH-223ENST00000641597 AIREO43918 545 aa16.09■□□□□ 0.17
PHGDH-223ENST00000641597 POU1F1P28069 291 aa16.09■□□□□ 0.17
PHGDH-223ENST00000641597 PSMB5P28074 263 aa16.09■□□□□ 0.17
PHGDH-223ENST00000641597 SLC6A11P48066 632 aa16.09■□□□□ 0.17
PHGDH-223ENST00000641597 CLK1P49759 484 aaKnown RBP16.09■□□□□ 0.17
PHGDH-223ENST00000641597 CDK6Q00534 326 aa16.09■□□□□ 0.17
PHGDH-223ENST00000641597 CNTN1Q12860 1018 aa16.09■□□□□ 0.17
PHGDH-223ENST00000641597 TIGD6Q17RP2 521 aa16.09■□□□□ 0.17
PHGDH-223ENST00000641597 CAMKMTQ7Z624 323 aa16.09■□□□□ 0.17
PHGDH-223ENST00000641597 CLIP4Q8N3C7 705 aa16.09■□□□□ 0.17
PHGDH-223ENST00000641597 RAB8BQ92930 207 aa16.09■□□□□ 0.17
PHGDH-223ENST00000641597 RSPRY1Q96DX4 576 aa16.09■□□□□ 0.17
PHGDH-223ENST00000641597 ITPAQ9BY32 194 aa16.09■□□□□ 0.17
PHGDH-223ENST00000641597 MROQ9BYG7 248 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms