RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 OR56A3Q8NH54 315 aa12.01□□□□□ -0.49
PNKP-217ENST00000625216 ATL1Q8WXF7 558 aa12.01□□□□□ -0.49
PNKP-217ENST00000625216 CDK15Q96Q40 435 aa12.01□□□□□ -0.49
PNKP-217ENST00000625216 OR2A5Q96R48 311 aa12.01□□□□□ -0.49
PNKP-217ENST00000625216 SPSB2Q99619 263 aa12.01□□□□□ -0.49
PNKP-217ENST00000625216 EBF4Q9BQW3 602 aa12.01□□□□□ -0.49
PNKP-217ENST00000625216 NOL11Q9H8H0 719 aaKnown RBP12.01□□□□□ -0.49
PNKP-217ENST00000625216 EML4Q9HC35 981 aaKnown RBP12.01□□□□□ -0.49
PNKP-217ENST00000625216 SEMA3GQ9NS98 782 aa12.01□□□□□ -0.49
PNKP-217ENST00000625216 TAC3Q9UHF0 121 aa12.01□□□□□ -0.49
PNKP-217ENST00000625216 ARL2BPQ9Y2Y0 163 aa12.01□□□□□ -0.49
PNKP-217ENST00000625216 FIS1Q9Y3D6 152 aa12.01□□□□□ -0.49
PNKP-217ENST00000625216 IGKV1-8A0A0C4DH67 115 aa12□□□□□ -0.49
PNKP-217ENST00000625216 A0A0G2JND7 137 aa12□□□□□ -0.49
PNKP-217ENST00000625216 A6NL46 340 aa12□□□□□ -0.49
PNKP-217ENST00000625216 PRAMEF4O60810 478 aa12□□□□□ -0.49
PNKP-217ENST00000625216 SKAP2O75563 359 aaPredicted RBP12□□□□□ -0.49
PNKP-217ENST00000625216 ESRRBO95718 433 aa12□□□□□ -0.49
PNKP-217ENST00000625216 MLYCDO95822 493 aa12□□□□□ -0.49
PNKP-217ENST00000625216 ALPPP05187 535 aa12□□□□□ -0.49
PNKP-217ENST00000625216 CCND1P24385 295 aa12□□□□□ -0.49
PNKP-217ENST00000625216 VARSP26640 1264 aaKnown RBP12□□□□□ -0.49
PNKP-217ENST00000625216 OR1D4P47884 311 aa12□□□□□ -0.49
PNKP-217ENST00000625216 CD97P48960 835 aa12□□□□□ -0.49
PNKP-217ENST00000625216 HK2P52789 917 aa12□□□□□ -0.49
PNKP-217ENST00000625216 ARFIP2P53365 341 aa12□□□□□ -0.49
PNKP-217ENST00000625216 AQP5P55064 265 aa12□□□□□ -0.49
PNKP-217ENST00000625216 PKNOX1P55347 436 aa12□□□□□ -0.49
PNKP-217ENST00000625216 TBPL1P62380 186 aa12□□□□□ -0.49
PNKP-217ENST00000625216 YBX1P67809 324 aaKnown RBP12□□□□□ -0.49
PNKP-217ENST00000625216 OCA2Q04671 838 aa12□□□□□ -0.49
PNKP-217ENST00000625216 AIMP2Q13155 320 aaKnown RBP12□□□□□ -0.49
PNKP-217ENST00000625216 MYBPC3Q14896 1274 aa12□□□□□ -0.49
PNKP-217ENST00000625216 THEMIS2Q5TEJ8 643 aa12□□□□□ -0.49
PNKP-217ENST00000625216 PRAMEF9Q5VWM5 478 aa12□□□□□ -0.49
PNKP-217ENST00000625216 KANK2Q63ZY3 851 aa12□□□□□ -0.49
PNKP-217ENST00000625216 GPRIN3Q6ZVF9 776 aa12□□□□□ -0.49
PNKP-217ENST00000625216 COX15Q7KZN9 410 aa12□□□□□ -0.49
PNKP-217ENST00000625216 THOC6Q86W42 341 aaKnown RBP12□□□□□ -0.49
PNKP-217ENST00000625216 ATCAYQ86WG3 371 aa12□□□□□ -0.49
PNKP-217ENST00000625216 GALNT16Q8N428 558 aa12□□□□□ -0.49
PNKP-217ENST00000625216 SNX31Q8N9S9 440 aa12□□□□□ -0.49
PNKP-217ENST00000625216 OR4F6Q8NGB9 312 aa12□□□□□ -0.49
PNKP-217ENST00000625216 RERGQ96A58 199 aaPredicted RBP12□□□□□ -0.49
PNKP-217ENST00000625216 COL26A1Q96A83 441 aa12□□□□□ -0.49
PNKP-217ENST00000625216 OR4K3Q96R72 315 aa12□□□□□ -0.49
PNKP-217ENST00000625216 NUDT9Q9BW91 350 aa12□□□□□ -0.49
PNKP-217ENST00000625216 IPPKQ9H8X2 491 aa12□□□□□ -0.49
PNKP-217ENST00000625216 CCDC177Q9NQR7 707 aaPredicted RBP12□□□□□ -0.49
PNKP-217ENST00000625216 TMEM184CQ9NVA4 438 aa12□□□□□ -0.49
PNKP-217ENST00000625216 DNAJC11Q9NVH1 559 aa12□□□□□ -0.49
PNKP-217ENST00000625216 ZNF282Q9UDV7 671 aaPredicted RBP12□□□□□ -0.49
PNKP-217ENST00000625216 SLC22A14Q9Y267 594 aa12□□□□□ -0.49
PNKP-217ENST00000625216 TRAF6Q9Y4K3 522 aa12□□□□□ -0.49
PNKP-217ENST00000625216 UBR5O95071 2799 aaPredicted RBP12□□□□□ -0.49
PNKP-217ENST00000625216 ASH1LQ9NR48 2969 aaKnown RBP12□□□□□ -0.49
PNKP-217ENST00000625216 IGLV3-12A0A075B6K2 115 aa11.99□□□□□ -0.49
PNKP-217ENST00000625216 KCNE1BA0A087WTH5 132 aa11.99□□□□□ -0.49
PNKP-217ENST00000625216 TTLL8A6PVC2 850 aa11.99□□□□□ -0.49
PNKP-217ENST00000625216 AZIN1O14977 448 aa11.99□□□□□ -0.49
PNKP-217ENST00000625216 HDAC3O15379 428 aa11.99□□□□□ -0.49
PNKP-217ENST00000625216 FGF4P08620 206 aa11.99□□□□□ -0.49
PNKP-217ENST00000625216 ATXN8OSP0DMR3 200 aa11.99□□□□□ -0.49
PNKP-217ENST00000625216 EPB42P16452 691 aa11.99□□□□□ -0.49
PNKP-217ENST00000625216 PIK3CGP48736 1102 aa11.99□□□□□ -0.49
PNKP-217ENST00000625216 IDH3AP50213 366 aa11.99□□□□□ -0.49
PNKP-217ENST00000625216 HTR6P50406 440 aa11.99□□□□□ -0.49
PNKP-217ENST00000625216 BTKQ06187 659 aa11.99□□□□□ -0.49
PNKP-217ENST00000625216 FAM53BQ14153 422 aa11.99□□□□□ -0.49
PNKP-217ENST00000625216 IGFBP7Q16270 282 aa11.99□□□□□ -0.49
PNKP-217ENST00000625216 UGT3A2Q3SY77 523 aa11.99□□□□□ -0.49
PNKP-217ENST00000625216 SLC9B1Q4ZJI4 515 aa11.99□□□□□ -0.49
PNKP-217ENST00000625216 TCHHL1Q5QJ38 904 aaPredicted RBP11.99□□□□□ -0.49
PNKP-217ENST00000625216 CSNK1A1LQ8N752 337 aa11.99□□□□□ -0.49
PNKP-217ENST00000625216 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.99□□□□□ -0.49
PNKP-217ENST00000625216 TM9SF4Q92544 642 aa11.99□□□□□ -0.49
PNKP-217ENST00000625216 MIB2Q96AX9 1013 aa11.99□□□□□ -0.49
PNKP-217ENST00000625216 THAP11Q96EK4 314 aa11.99□□□□□ -0.49
PNKP-217ENST00000625216 SIKE1Q9BRV8 207 aa11.99□□□□□ -0.49
PNKP-217ENST00000625216 SGPP1Q9BX95 441 aa11.99□□□□□ -0.49
PNKP-217ENST00000625216 NUF2Q9BZD4 464 aa11.99□□□□□ -0.49
PNKP-217ENST00000625216 SH2B3Q9UQQ2 575 aa11.99□□□□□ -0.49
PNKP-217ENST00000625216 STK38LQ9Y2H1 464 aa11.99□□□□□ -0.49
PNKP-217ENST00000625216 ANGPTL3Q9Y5C1 460 aa11.99□□□□□ -0.49
PNKP-217ENST00000625216 SLCO1B7G3V0H7 640 aa11.98□□□□□ -0.49
PNKP-217ENST00000625216 H7BY64 318 aa11.98□□□□□ -0.49
PNKP-217ENST00000625216 SDHDO14521 159 aa11.98□□□□□ -0.49
PNKP-217ENST00000625216 PCDH17O14917 1159 aa11.98□□□□□ -0.49
PNKP-217ENST00000625216 NRP2O60462 931 aa11.98□□□□□ -0.49
PNKP-217ENST00000625216 OTCP00480 354 aa11.98□□□□□ -0.49
PNKP-217ENST00000625216 ZGLP1P0C6A0 271 aa11.98□□□□□ -0.49
PNKP-217ENST00000625216 FBLP22087 321 aaKnown RBP11.98□□□□□ -0.49
PNKP-217ENST00000625216 SERPINB3P29508 390 aa11.98□□□□□ -0.49
PNKP-217ENST00000625216 CCNG1P51959 295 aa11.98□□□□□ -0.49
PNKP-217ENST00000625216 MLLT10P55197 1068 aa11.98□□□□□ -0.49
PNKP-217ENST00000625216 RPS15AP62244 130 aaKnown RBP11.98□□□□□ -0.49
PNKP-217ENST00000625216 CDC16Q13042 620 aa11.98□□□□□ -0.49
PNKP-217ENST00000625216 DSG2Q14126 1118 aa11.98□□□□□ -0.49
PNKP-217ENST00000625216 NDUFA9Q16795 377 aa11.98□□□□□ -0.49
PNKP-217ENST00000625216 NADK2Q4G0N4 442 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms