RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 MYO10Q9HD67 2058 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 PRUNE2Q8WUY3 3088 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 TMEM229AB2RXF0 380 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 AXIN1O15169 862 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 RGS10O43665 173 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 SLC16A8O95907 504 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 ANXA4P09525 319 aaPredicted RBP14.1□□□□□ -0.15
CDH1-213ENST00000612417 C6P13671 934 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 EPHA2P29317 976 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 TIA1P31483 386 aaKnown RBP eCLIP14.1□□□□□ -0.15
CDH1-213ENST00000612417 P2RY2P41231 377 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 TNFRSF4P43489 277 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 PXNP49023 591 aaPredicted RBP14.1□□□□□ -0.15
CDH1-213ENST00000612417 PHEXP78562 749 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 OCA2Q04671 838 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 CAMK2GQ13555 558 aaPredicted RBP14.1□□□□□ -0.15
CDH1-213ENST00000612417 ZNF846Q147U1 533 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 CLCA4Q14CN2 919 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 RGS21Q2M5E4 152 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 CCDC92Q53HC0 331 aaPredicted RBP14.1□□□□□ -0.15
CDH1-213ENST00000612417 C2orf27AQ580R0 203 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 C10orf62Q5T681 223 aaPredicted RBP14.1□□□□□ -0.15
CDH1-213ENST00000612417 ZBTB46Q86UZ6 589 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 P2RY8Q86VZ1 359 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 CCDC71Q8IV32 467 aaPredicted RBP14.1□□□□□ -0.15
CDH1-213ENST00000612417 RASGEF1AQ8N9B8 481 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 ATG16L2Q8NAA4 619 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 FBXO15Q8NCQ5 510 aaPredicted RBP14.1□□□□□ -0.15
CDH1-213ENST00000612417 GOT1L1Q8NHS2 421 aaPredicted RBP14.1□□□□□ -0.15
CDH1-213ENST00000612417 HUS1BQ8NHY5 278 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 CXorf40AQ8TE69 158 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 GLYATL1Q969I3 302 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 NUS1Q96E22 293 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 MED8Q96G25 268 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 HRASLS5Q96KN8 279 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 COQ10AQ96MF6 247 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 CCM2Q9BSQ5 444 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 WDR12Q9GZL7 423 aaKnown RBP14.1□□□□□ -0.15
CDH1-213ENST00000612417 HMG20AQ9NP66 347 aa14.1□□□□□ -0.15
CDH1-213ENST00000612417 TRPM6Q9BX84 2022 aa14.09□□□□□ -0.15
CDH1-213ENST00000612417 ANHXE9PGG2 379 aa14.09□□□□□ -0.15
CDH1-213ENST00000612417 K7EQS6 105 aa14.09□□□□□ -0.15
CDH1-213ENST00000612417 SUV39H1O43463 412 aa14.09□□□□□ -0.15
CDH1-213ENST00000612417 MT-ND2P03891 347 aa14.09□□□□□ -0.15
CDH1-213ENST00000612417 NR4A1P22736 598 aa14.09□□□□□ -0.15
CDH1-213ENST00000612417 IDUAP35475 653 aa14.09□□□□□ -0.15
CDH1-213ENST00000612417 KRT20P35900 424 aa14.09□□□□□ -0.15
CDH1-213ENST00000612417 ST13P50502 369 aaKnown RBP14.09□□□□□ -0.15
CDH1-213ENST00000612417 CTSCP53634 463 aa14.09□□□□□ -0.15
CDH1-213ENST00000612417 IL1RL1Q01638 556 aa14.09□□□□□ -0.15
CDH1-213ENST00000612417 GAB1Q13480 694 aa14.09□□□□□ -0.15
CDH1-213ENST00000612417 ADPRMQ3LIE5 342 aa14.09□□□□□ -0.15
CDH1-213ENST00000612417 CCSMST1Q4G0I0 132 aa14.09□□□□□ -0.15
CDH1-213ENST00000612417 C11orf65Q8NCR3 313 aa14.09□□□□□ -0.15
CDH1-213ENST00000612417 ZNF540Q8NDQ6 660 aa14.09□□□□□ -0.15
CDH1-213ENST00000612417 CDC26Q8NHZ8 85 aa14.09□□□□□ -0.15
CDH1-213ENST00000612417 S100ZQ8WXG8 99 aa14.09□□□□□ -0.15
CDH1-213ENST00000612417 PKP4Q99569 1192 aa14.09□□□□□ -0.15
CDH1-213ENST00000612417 DOHHQ9BU89 302 aa14.09□□□□□ -0.15
CDH1-213ENST00000612417 HDAC8Q9BY41 377 aa14.09□□□□□ -0.15
CDH1-213ENST00000612417 BHLHE41Q9C0J9 482 aaPredicted RBP14.09□□□□□ -0.15
CDH1-213ENST00000612417 ACOT13Q9NPJ3 140 aa14.09□□□□□ -0.15
CDH1-213ENST00000612417 FAM8A1Q9UBU6 413 aa14.09□□□□□ -0.15
CDH1-213ENST00000612417 ATP6V1HQ9UI12 483 aa14.09□□□□□ -0.15
CDH1-213ENST00000612417 VPS4AQ9UN37 437 aa14.09□□□□□ -0.15
CDH1-213ENST00000612417 PCDHGB3Q9Y5G1 929 aa14.09□□□□□ -0.15
CDH1-213ENST00000612417 MID1O15344 667 aa14.08□□□□□ -0.15
CDH1-213ENST00000612417 WBP4O75554 376 aaKnown RBP14.08□□□□□ -0.15
CDH1-213ENST00000612417 NUDT7P0C024 238 aa14.08□□□□□ -0.15
CDH1-213ENST00000612417 MAP2K4P45985 399 aa14.08□□□□□ -0.15
CDH1-213ENST00000612417 PREPP48147 710 aa14.08□□□□□ -0.15
CDH1-213ENST00000612417 RPP38P78345 283 aaKnown RBP14.08□□□□□ -0.15
CDH1-213ENST00000612417 ELOAQ14241 798 aaKnown RBP14.08□□□□□ -0.15
CDH1-213ENST00000612417 SF1Q15637 639 aaKnown RBP14.08□□□□□ -0.15
CDH1-213ENST00000612417 HKDC1Q2TB90 917 aa14.08□□□□□ -0.15
CDH1-213ENST00000612417 ZNF658BQ4V348 819 aaPredicted RBP14.08□□□□□ -0.15
CDH1-213ENST00000612417 SLCO4C1Q6ZQN7 724 aa14.08□□□□□ -0.15
CDH1-213ENST00000612417 FAM124AQ86V42 546 aa14.08□□□□□ -0.15
CDH1-213ENST00000612417 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.08□□□□□ -0.15
CDH1-213ENST00000612417 REPS1Q96D71 796 aa14.08□□□□□ -0.15
CDH1-213ENST00000612417 WDR34Q96EX3 536 aa14.08□□□□□ -0.15
CDH1-213ENST00000612417 TPD52L3Q96J77 140 aa14.08□□□□□ -0.15
CDH1-213ENST00000612417 EPHX3Q9H6B9 360 aa14.08□□□□□ -0.15
CDH1-213ENST00000612417 FBXO8Q9NRD0 319 aa14.08□□□□□ -0.15
CDH1-213ENST00000612417 KCNE2Q9Y6J6 123 aa14.08□□□□□ -0.15
CDH1-213ENST00000612417 CKAP5Q14008 2032 aa14.08□□□□□ -0.16
CDH1-213ENST00000612417 FUOMA2VDF0 154 aa14.08□□□□□ -0.16
CDH1-213ENST00000612417 MGAT4DA6NG13 374 aa14.08□□□□□ -0.16
CDH1-213ENST00000612417 TMEM221A6NGB7 291 aa14.08□□□□□ -0.16
CDH1-213ENST00000612417 PCDHGA12O60330 932 aa14.08□□□□□ -0.16
CDH1-213ENST00000612417 FAM20BO75063 409 aa14.08□□□□□ -0.16
CDH1-213ENST00000612417 GCM2O75603 506 aaPredicted RBP14.08□□□□□ -0.16
CDH1-213ENST00000612417 GPR1P46091 355 aa14.08□□□□□ -0.16
CDH1-213ENST00000612417 BDKRB1P46663 353 aa14.08□□□□□ -0.16
CDH1-213ENST00000612417 CD97P48960 835 aa14.08□□□□□ -0.16
CDH1-213ENST00000612417 CST6Q15828 149 aa14.08□□□□□ -0.16
CDH1-213ENST00000612417 SMN1Q16637 294 aaKnown RBP14.08□□□□□ -0.16
CDH1-213ENST00000612417 TMEM52BQ4KMG9 183 aa14.08□□□□□ -0.16
CDH1-213ENST00000612417 RAET1GQ6H3X3 334 aa14.08□□□□□ -0.16
CDH1-213ENST00000612417 ADNP2Q6IQ32 1131 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms